; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G010340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRNA-binding protein Musashi homolog 1
Genome locationCmo_Chr20:8898266..8903582
RNA-Seq ExpressionCmoCh20G010340
SyntenyCmoCh20G010340
Gene Ontology termsGO:0003676 - nucleic acid binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571306.1 Heterogeneous nuclear ribonucleoprotein 1, partial [Cucurbita argyrosperma subsp. sororia]5.8e-7058.82Show/hide
Query:  GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTF
        GASARDLGRVSV                              APFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTF
Subjt:  GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTF

Query:  ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTF
        ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF
Subjt:  ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTF

Query:  YILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                                                                     + +SVESLMAETHELGGSTVVVDRATPK
Subjt:  YILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

XP_008457826.1 PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo]1.6e-6462.4Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWDVDTE LREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD
        ISQ+VTEAAFRSHFEKYGEITDLYMPK +                   G  T                         + G G                  
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD

Query:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
          FI    S       +SVE+LMA+THELGGSTVVVDRATPK
Subjt:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

XP_022932294.1 heterogeneous nuclear ribonucleoprotein D0-like [Cucurbita moschata]3.5e-9169.2Show/hide
Query:  GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTF
        GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTF
Subjt:  GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTF

Query:  ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTF
        ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF
Subjt:  ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTF

Query:  YILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                                                                     + +SVESLMAETHELGGSTVVVDRATPK
Subjt:  YILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

XP_022973186.1 heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 [Cucurbita maxima]6.6e-6662.96Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWD+DTEALREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL
        ISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF                                              
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL

Query:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                       +  SVESLMAETHELGGSTVVVDRATPK
Subjt:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

XP_038877270.1 RNA-binding protein Musashi homolog 1 [Benincasa hispida]1.6e-6462.4Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWDVDTE LR+YMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD
        ISQSVTEAAFRSHFEKYGEITDLYMPK +                   G  T                         + G G                  
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD

Query:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
          FI    S       +SVE+LMA+THELGGSTVVVDRATPK
Subjt:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

TrEMBL top hitse value%identityAlignment
A0A1S3C728 RNA-binding protein Musashi homolog 17.9e-6562.4Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWDVDTE LREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD
        ISQ+VTEAAFRSHFEKYGEITDLYMPK +                   G  T                         + G G                  
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD

Query:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
          FI    S       +SVE+LMA+THELGGSTVVVDRATPK
Subjt:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

A0A6J1D811 RNA-binding protein Musashi homolog 1 isoform X21.0e-6460.91Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWD+DTE L++YMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL
        ISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF                                              
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL

Query:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                       + +SVE+LMAETHELGGSTVVVDRATPK
Subjt:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

A0A6J1D8F7 RNA-binding protein Musashi homolog 1 isoform X11.0e-6460.91Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWD+DTE L++YMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL
        ISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF                                              
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL

Query:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                       + +SVE+LMAETHELGGSTVVVDRATPK
Subjt:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

A0A6J1EWL0 heterogeneous nuclear ribonucleoprotein D0-like1.7e-9169.2Show/hide
Query:  GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTF
        GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTF
Subjt:  GASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTF

Query:  ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTF
        ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF
Subjt:  ATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTF

Query:  YILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                                                                     + +SVESLMAETHELGGSTVVVDRATPK
Subjt:  YILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

A0A6J1I7Z8 heterogeneous nuclear ribonucleoprotein D-like-B isoform X13.2e-6662.96Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        MDRKLVVLGIPWD+DTEALREYMSKFGELEDCIVMK   ERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL
        ISQSVTEAAFRSHFEKYGEITDLYMPK +  ++H+             IG  TF                                              
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVR-FRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRL

Query:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                       +  SVESLMAETHELGGSTVVVDRATPK
Subjt:  DYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

SwissProt top hitse value%identityAlignment
O94432 Uncharacterized RNA-binding protein C660.151.2e-1735.16Show/hide
Query:  TAPFIM-DRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVT
        T+PF   D K+ + G+ W+   ++LR+Y  +FGE+ DC VM+   + +TGRSRGFG++TF   +     +S EH L  ++++ K A P+EE     ++  
Subjt:  TAPFIM-DRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVT

Query:  RIFVARISQSVTEAAFRSHFEKYGEITD
        ++FV  +    TE  FR+ F ++G + D
Subjt:  RIFVARISQSVTEAAFRSHFEKYGEITD

Q13148 TAR DNA-binding protein 431.7e-1633.33Show/hide
Query:  LVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQS
        L+VLG+PW    + L+EY S FGE+   +++++  +  TG S+GFG+V F   E     +S  H +  R  + K+   K+  +  P R  ++FV R ++ 
Subjt:  LVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQS

Query:  VTEAAFRSHFEKYGEITDLYMPK
        +TE   R  F +YG++ D+++PK
Subjt:  VTEAAFRSHFEKYGEITDLYMPK

Q28F51 TAR DNA-binding protein 432.9e-1633.33Show/hide
Query:  LVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQS
        L+VLG+PW    + L++Y S FGE+   I++++  +  TG S+GFG+V FA  E     +S  H +  R  + K+  P  +    P R  ++FV R ++ 
Subjt:  LVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQS

Query:  VTEAAFRSHFEKYGEITDLYMPK
        ++    R  F +YGE+ D+++PK
Subjt:  VTEAAFRSHFEKYGEITDLYMPK

Q5R5W2 TAR DNA-binding protein 431.7e-1633.33Show/hide
Query:  LVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQS
        L+VLG+PW    + L+EY S FGE+   +++++  +  TG S+GFG+V F   E     +S  H +  R  + K+   K+  +  P R  ++FV R ++ 
Subjt:  LVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQS

Query:  VTEAAFRSHFEKYGEITDLYMPK
        +TE   R  F +YG++ D+++PK
Subjt:  VTEAAFRSHFEKYGEITDLYMPK

Q96DH6 RNA-binding protein Musashi homolog 21.1e-1537.4Show/hide
Query:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHF-LGNRMMEVKIATPKEEMRAPPKRVTR---IFVA
        K+ + G+ W    ++LR+Y SKFGE+ +C+VM+   + +T RSRGFG+VTFA        L   H  L ++ ++ K+A P+   RA PK VTR   IFV 
Subjt:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHF-LGNRMMEVKIATPKEEMRAPPKRVTR---IFVA

Query:  RISQSVTEAAFRSHFEKYGEITD
         +S +      + +FE++G++ D
Subjt:  RISQSVTEAAFRSHFEKYGEITD

Arabidopsis top hitse value%identityAlignment
AT3G07810.1 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-2035.82Show/hide
Query:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMR--------------AP
        KL + GI WD + E L+EY S FGE+ + +++K   +R+TGR+RGFG+V FA    A+  ++ +H +  R++E K A P+++                  
Subjt:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMR--------------AP

Query:  PKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL
        P R  +IFV  +  SVTE+ F+++FE++G  TD+
Subjt:  PKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL

AT3G07810.2 RNA-binding (RRM/RBD/RNP motifs) family protein7.6e-2035.82Show/hide
Query:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMR--------------AP
        KL + GI WD + E L+EY S FGE+ + +++K   +R+TGR+RGFG+V FA    A+  ++ +H +  R++E K A P+++                  
Subjt:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMR--------------AP

Query:  PKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL
        P R  +IFV  +  SVTE+ F+++FE++G  TD+
Subjt:  PKRVTRIFVARISQSVTEAAFRSHFEKYGEITDL

AT4G26650.1 RNA-binding (RRM/RBD/RNP motifs) family protein2.9e-1933.81Show/hide
Query:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMR-----APP--------
        KL + GI WD D E L+EY  K+G+L + ++M+   +R+TGR+RGFG++ FA    A+  +  +H +  R +E K A P+++ +     A P        
Subjt:  KLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMR-----APP--------

Query:  ------KRVTRIFVARISQSVTEAAFRSHFEKYGEITDL
               R  +IFV  +  S+TEA F+++F+++G I D+
Subjt:  ------KRVTRIFVARISQSVTEAAFRSHFEKYGEITDL

AT4G36960.1 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-5550Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        M+RKLVVLGIPWD+D++ L++YMSKFG+LEDCIVMK   +RSTGRSRGFGYVTFA+ EDAKNAL  EHFLGNR++EVK+ATPKEEMR P K+VTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD
        I  SV+E+ FRSHFE+YGEITDLYMPK                                             Y    + G G                  
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD

Query:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                  +   + +SVE LM +TH+LGG+TV VDRATPK
Subjt:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK

AT4G36960.2 RNA-binding (RRM/RBD/RNP motifs) family protein1.5e-5550Show/hide
Query:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR
        M+RKLVVLGIPWD+D++ L++YMSKFG+LEDCIVMK   +RSTGRSRGFGYVTFA+ EDAKNAL  EHFLGNR++EVK+ATPKEEMR P K+VTRIFVAR
Subjt:  MDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVAR

Query:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD
        I  SV+E+ FRSHFE+YGEITDLYMPK                                             Y    + G G                  
Subjt:  ISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQSTMYYLMNYSGPGIQNPSWNRFHHLCKFRLD

Query:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK
                  +   + +SVE LM +TH+LGG+TV VDRATPK
Subjt:  YIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAAATCGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTAGAGCGAGCGAGCGAGCGAGCGAGGAAGAGGAGGAGGAGAGAGATATACTTTCACT
TTTAGGATTCGATTTCTCTGCGTTTACTGCACCATTCATCATGGATCGGAAGCTAGTGGTTCTTGGTATTCCATGGGACGTCGATACAGAGGCGCTGAGAGAATACATGA
GCAAATTTGGGGAGTTGGAGGATTGTATCGTCATGAAGATTGTTTATGAGAGGTCAACTGGTCGTTCTCGTGGGTTTGGATATGTGACATTTGCAACTGACGAAGATGCT
AAGAATGCACTGTCAAGTGAACACTTTCTTGGCAACAGAATGATGGAAGTCAAAATTGCCACACCTAAGGAGGAGATGAGAGCACCTCCAAAGAGAGTCACTAGAATCTT
TGTAGCAAGGATCTCACAATCTGTGACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATACGGAGAGATAACAGATCTTTACATGCCAAAGGTACGGTTTCGTCTACACC
AAAGTTGGAAATTAGTTCTGTGGTGTCCATGTACTATGCAAATTGGGAAACATACATTTTATATATTGATTTATGACCACATATGGTTCACCCATGCTCATGTGCAATCT
ACAATGTATTACTTGATGAATTATTCAGGACCAGGGATCCAAAATCCATCGTGGAATAGGTTTCATCACCTTTGCAAGTTCAGGTTGGATTATATTTTTATATTGATATG
TGATTCTAGAGTGCAAGTTGTCAATTTTAATTCTGTGGAAAGTTTGATGGCTGAAACTCATGAATTAGGAGGTTCTACTGTGGTTGTTGATAGAGCAACCCCCAAGGCAA
GATTTTGCAATTTCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAAATCGGGAGCGAGTGCGAGAGATTTGGGGAGAGTGAGCGTGGGTCTTAGAGCGAGCGAGCGAGCGAGCGAGGAAGAGGAGGAGGAGAGAGATATACTTTCACT
TTTAGGATTCGATTTCTCTGCGTTTACTGCACCATTCATCATGGATCGGAAGCTAGTGGTTCTTGGTATTCCATGGGACGTCGATACAGAGGCGCTGAGAGAATACATGA
GCAAATTTGGGGAGTTGGAGGATTGTATCGTCATGAAGATTGTTTATGAGAGGTCAACTGGTCGTTCTCGTGGGTTTGGATATGTGACATTTGCAACTGACGAAGATGCT
AAGAATGCACTGTCAAGTGAACACTTTCTTGGCAACAGAATGATGGAAGTCAAAATTGCCACACCTAAGGAGGAGATGAGAGCACCTCCAAAGAGAGTCACTAGAATCTT
TGTAGCAAGGATCTCACAATCTGTGACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATACGGAGAGATAACAGATCTTTACATGCCAAAGGTACGGTTTCGTCTACACC
AAAGTTGGAAATTAGTTCTGTGGTGTCCATGTACTATGCAAATTGGGAAACATACATTTTATATATTGATTTATGACCACATATGGTTCACCCATGCTCATGTGCAATCT
ACAATGTATTACTTGATGAATTATTCAGGACCAGGGATCCAAAATCCATCGTGGAATAGGTTTCATCACCTTTGCAAGTTCAGGTTGGATTATATTTTTATATTGATATG
TGATTCTAGAGTGCAAGTTGTCAATTTTAATTCTGTGGAAAGTTTGATGGCTGAAACTCATGAATTAGGAGGTTCTACTGTGGTTGTTGATAGAGCAACCCCCAAGGCAA
GATTTTGCAATTTCTACTGA
Protein sequenceShow/hide protein sequence
MMKSGASARDLGRVSVGLRASERASEEEEEERDILSLLGFDFSAFTAPFIMDRKLVVLGIPWDVDTEALREYMSKFGELEDCIVMKIVYERSTGRSRGFGYVTFATDEDA
KNALSSEHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKVRFRLHQSWKLVLWCPCTMQIGKHTFYILIYDHIWFTHAHVQS
TMYYLMNYSGPGIQNPSWNRFHHLCKFRLDYIFILICDSRVQVVNFNSVESLMAETHELGGSTVVVDRATPKARFCNFY