| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0031437.1 pol protein [Cucumis melo var. makuwa] | 3.1e-123 | 53.73 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+ DIPKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVFKEFL++FVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
SF+ELK++LVTAPVLTVPD SGN V+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q++TDHKS
Subjt: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
Query: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
LKY FTQKELNMRQRRWLELVK+YD EILYHPGKANVV DALSRK H++A+IT Q L + +RA I V V Q+AQLT+QPTLR+KII AQ D
Subjt: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
Query: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
+L++ ETE+ G+SISSD+ L+++ RLCV D + +++TEAH + +T +P
Subjt: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| KAA0059062.1 pol protein [Cucumis melo var. makuwa] | 8.3e-124 | 55.32 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+++ED+PKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVF+EFL+TFVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------SFEELKKRLVTAPVLTVP
SF+ LK++LVTAPVLTVP
Subjt: ----------------------------------------------------------------------------------SFEELKKRLVTAPVLTVP
Query: DRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNY
D SG+ V+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q+FTDHKSLKY FTQKELNMRQRRWLELVK+Y
Subjt: DRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNY
Query: DIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDES
D EILYHPGKANVV DALSRK H++A+IT Q L +++RA I V V +Q+AQLT+QPTLR++IIDAQ D +L + E + +S+SSD
Subjt: DIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDES
Query: LLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
LL++ RLCV D I ++++EAH + ++ +P
Subjt: LLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| KAA0067622.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.1e-123 | 56.53 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+++ED+PKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVF+EFL+TFVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ---------------------------------------------------------------------------SFEELKKRLVTAPVLTVPDRSGNLV
SF+ LK++LVTAPVLTVPD SG+ V
Subjt: ---------------------------------------------------------------------------SFEELKKRLVTAPVLTVPDRSGNLV
Query: VYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIEILYH
+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q+FTDHKSLKY FTQKELNMRQRRWLELVK+YD EILYH
Subjt: VYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIEILYH
Query: PGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRL
PGKANVV DALSRK H++A+IT Q L +++RA I V V +Q+AQLT+QPTLR++IIDAQ D +L + E + A +S+SSD LL++ RL
Subjt: PGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRL
Query: CVSRDEGILKDIMTEAHDTSY
CV D + +++ EAH + +
Subjt: CVSRDEGILKDIMTEAHDTSY
|
|
| XP_022931734.1 uncharacterized protein LOC111437896 [Cucurbita moschata] | 5.3e-147 | 61.84 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQ+R+REEDIPKT FRS YGHYEF+VMSFGLTNAPAV +ELMNRVFKEFL+TFVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
SF ELKKRLVTAPVLTVPD SG LVVYSDA GKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTWRHYLYG++VQV+TDHKS
Subjt: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
Query: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
LKYLFTQKELNMRQRRWLELVK+YDIEILYHPGKANVV DALSRKT HTSA+IT Q+ LQDE++RA I+V+ +G Q+AQL++QPTL+++II+AQR D
Subjt: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
Query: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
HLS++W Q ETERP GYS+SS+ L+WQ+RLCV RDE IL++IMTEAH+TSYTF+P
Subjt: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| XP_022931734.1 uncharacterized protein LOC111437896 [Cucurbita moschata] | 1.0e-17 | 55.68 | Show/hide |
Query: CPNCRHPHTGEYRAGTGACYRCSQVGYFVVDCPQRNDQRVNRPVVQHQMGQGAQHQQGRAVAHATTARQADQPDAVVTGTLPIFSHLA
CPNC+ H GE AGTG C+ C + G+ + DCP + + NRPV Q+Q G+GA QQ RAV HA T R+A++ DAVVTGTLPI HLA
Subjt: CPNCRHPHTGEYRAGTGACYRCSQVGYFVVDCPQRNDQRVNRPVVQHQMGQGAQHQQGRAVAHATTARQADQPDAVVTGTLPIFSHLA
|
|
| XP_022931734.1 uncharacterized protein LOC111437896 [Cucurbita moschata] | 4.8e-124 | 56.18 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDILSF-------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+ DIPKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVFK+FL++FVIVFIDDIL +
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDILSF-------
Query: ---------------------------------------------------------------------------------EELKKRLVTAPVLTVPDRS
EELK++LVTAPVLTVPD S
Subjt: ---------------------------------------------------------------------------------EELKKRLVTAPVLTVPDRS
Query: GNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIE
GN V+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q++TDHKSLKY FTQKELNMRQRRWLELVK+YD E
Subjt: GNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIE
Query: ILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLW
ILYHPGKANVV DALSRK H++A+IT Q L + +RA I V V Q+AQLT+QPTLR+KII AQ D +L++ ETE+ +SISSD+ L++
Subjt: ILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLW
Query: QNRLCVSRDEGILKDIMTEAHDTSYTFYP
+ RLCV D + +++ EAH + +T +P
Subjt: QNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7UT37 Reverse transcriptase | 4.0e-124 | 55.32 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+++ED+PKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVF+EFL+TFVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------SFEELKKRLVTAPVLTVP
SF+ LK++LVTAPVLTVP
Subjt: ----------------------------------------------------------------------------------SFEELKKRLVTAPVLTVP
Query: DRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNY
D SG+ V+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q+FTDHKSLKY FTQKELNMRQRRWLELVK+Y
Subjt: DRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNY
Query: DIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDES
D EILYHPGKANVV DALSRK H++A+IT Q L +++RA I V V +Q+AQLT+QPTLR++IIDAQ D +L + E + +S+SSD
Subjt: DIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDES
Query: LLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
LL++ RLCV D I ++++EAH + ++ +P
Subjt: LLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| A0A5A7VGW8 Reverse transcriptase | 5.2e-124 | 56.53 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+++ED+PKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVF+EFL+TFVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ---------------------------------------------------------------------------SFEELKKRLVTAPVLTVPDRSGNLV
SF+ LK++LVTAPVLTVPD SG+ V
Subjt: ---------------------------------------------------------------------------SFEELKKRLVTAPVLTVPDRSGNLV
Query: VYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIEILYH
+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q+FTDHKSLKY FTQKELNMRQRRWLELVK+YD EILYH
Subjt: VYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIEILYH
Query: PGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRL
PGKANVV DALSRK H++A+IT Q L +++RA I V V +Q+AQLT+QPTLR++IIDAQ D +L + E + A +S+SSD LL++ RL
Subjt: PGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRL
Query: CVSRDEGILKDIMTEAHDTSY
CV D + +++ EAH + +
Subjt: CVSRDEGILKDIMTEAHDTSY
|
|
| A0A5D3CQB5 Reverse transcriptase | 1.5e-123 | 53.73 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+ DIPKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVFKEFL++FVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
SF+ELK++LVTAPVLTVPD SGN V+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q++TDHKS
Subjt: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
Query: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
LKY FTQKELNMRQRRWLELVK+YD EILYHPGKANVV DALSRK H++A+IT Q L + +RA I V V Q+AQLT+QPTLR+KII AQ D
Subjt: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
Query: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
+L++ ETE+ G+SISSD+ L+++ RLCV D + +++TEAH + +T +P
Subjt: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| A0A6J1EV26 Reverse transcriptase | 2.6e-147 | 61.84 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQ+R+REEDIPKT FRS YGHYEF+VMSFGLTNAPAV +ELMNRVFKEFL+TFVIVFIDDIL
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
SF ELKKRLVTAPVLTVPD SG LVVYSDA GKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVV+ALKTWRHYLYG++VQV+TDHKS
Subjt: ------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKS
Query: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
LKYLFTQKELNMRQRRWLELVK+YDIEILYHPGKANVV DALSRKT HTSA+IT Q+ LQDE++RA I+V+ +G Q+AQL++QPTL+++II+AQR D
Subjt: LKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDE
Query: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
HLS++W Q ETERP GYS+SS+ L+WQ+RLCV RDE IL++IMTEAH+TSYTF+P
Subjt: HLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| A0A6J1EV26 Reverse transcriptase | 5.0e-18 | 55.68 | Show/hide |
Query: CPNCRHPHTGEYRAGTGACYRCSQVGYFVVDCPQRNDQRVNRPVVQHQMGQGAQHQQGRAVAHATTARQADQPDAVVTGTLPIFSHLA
CPNC+ H GE AGTG C+ C + G+ + DCP + + NRPV Q+Q G+GA QQ RAV HA T R+A++ DAVVTGTLPI HLA
Subjt: CPNCRHPHTGEYRAGTGACYRCSQVGYFVVDCPQRNDQRVNRPVVQHQMGQGAQHQQGRAVAHATTARQADQPDAVVTGTLPIFSHLA
|
|
| A0A6J1EV26 Reverse transcriptase | 2.3e-124 | 56.18 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDILSF-------
+YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLR+R+ DIPKT FRS YGHYEF+VMSFGLTNAPAV ++LMNRVFK+FL++FVIVFIDDIL +
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDILSF-------
Query: ---------------------------------------------------------------------------------EELKKRLVTAPVLTVPDRS
EELK++LVTAPVLTVPD S
Subjt: ---------------------------------------------------------------------------------EELKKRLVTAPVLTVPDRS
Query: GNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIE
GN V+YSDA KGLGCVLMQ+GKV+AYASRQLK +E+NYPTHDLELAAVVFALK WRHYLYG+K+Q++TDHKSLKY FTQKELNMRQRRWLELVK+YD E
Subjt: GNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIE
Query: ILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLW
ILYHPGKANVV DALSRK H++A+IT Q L + +RA I V V Q+AQLT+QPTLR+KII AQ D +L++ ETE+ +SISSD+ L++
Subjt: ILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQLTIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLW
Query: QNRLCVSRDEGILKDIMTEAHDTSYTFYP
+ RLCV D + +++ EAH + +T +P
Subjt: QNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04323 Retrovirus-related Pol polyprotein from transposon 17.6 | 2.7e-32 | 26.37 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
++P+P +D++ +L F+ IDL G+HQ+ + E + KT F + +GHYE+L M FGL NAPA MN + + L +V++DDI+
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHK
+F++LK + P+L VPD + + +DA LG VL Q G ++Y SR L E+E NY T + EL A+V+A KT+RHYL G+ ++ +DH+
Subjt: -------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHK
Query: SLKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSR-KTVHTSAMITTQERLQDE
L +L+ K+ N + RW + +D +I Y GK N V DALSR K T TQ +++
Subjt: SLKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSR-KTVHTSAMITTQERLQDE
|
|
| P0CT34 Transposon Tf2-1 polyprotein | 4.1e-25 | 21.73 | Show/hide |
Query: PIFSHLATYKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL
P+ ++ YPLP I+ L ++QG+T+F+K+DL+S YH +RVR+ D K FR G +E+LVM +G++ APA +N + E E+ V+ ++DDIL
Subjt: PIFSHLATYKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHY
+ E +K+ LV+ PVL D S +++ +DA +G VL QK + Y S ++ + + NY D E+ A++ +LK WRHY
Subjt: ---------------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHY
Query: LYG--KKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQL
L + ++ TDH++L T + N R RW +++++ EI Y PG AN + DALSR ++ E + + + I+ V Q+
Subjt: LYG--KKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQL
Query: TIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
+I + +++ D L + + + + + ++++ + D + + I+ + H+ +P
Subjt: TIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| P0CT41 Transposon Tf2-12 polyprotein | 4.1e-25 | 21.73 | Show/hide |
Query: PIFSHLATYKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL
P+ ++ YPLP I+ L ++QG+T+F+K+DL+S YH +RVR+ D K FR G +E+LVM +G++ APA +N + E E+ V+ ++DDIL
Subjt: PIFSHLATYKYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ---------------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHY
+ E +K+ LV+ PVL D S +++ +DA +G VL QK + Y S ++ + + NY D E+ A++ +LK WRHY
Subjt: ---------------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGK-----VIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHY
Query: LYG--KKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQL
L + ++ TDH++L T + N R RW +++++ EI Y PG AN + DALSR ++ E + + + I+ V Q+
Subjt: LYG--KKVQVFTDHKSLKYLFTQKE--LNMRQRRWLELVKNYDIEILYHPGKANVVVDALSRKTVHTSAMITTQERLQDEMKRARIDVVVKGGNVQMAQL
Query: TIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
+I + +++ D L + + + + + ++++ + D + + I+ + H+ +P
Subjt: TIQPTLRKKIIDAQRYDEHLSKVWSQTETERPAGYSISSDESLLWQNRLCVSRDEGILKDIMTEAHDTSYTFYP
|
|
| P20825 Retrovirus-related Pol polyprotein from transposon 297 | 2.7e-32 | 27.25 | Show/hide |
Query: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
+YP+P +D++ +L F+ IDL G+HQ+ + EE I KT F + GHYE+L M FGL NAPA MN + + L +V++DDI+
Subjt: KYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL---------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: -------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHK
+FE+LK ++ P+L +PD V+ +DA LG VL Q G I++ SR L ++E NY + EL A+V+A KT+RHYL G++ + +DH+
Subjt: -------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQKGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHYLYGKKVQVFTDHK
Query: SLKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSR
L++L KE + RW + Y +I Y GK N V DALSR
Subjt: SLKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSR
|
|
| Q8I7P9 Retrovirus-related Pol polyprotein from transposon opus | 4.4e-27 | 25.35 | Show/hide |
Query: YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL----------
YP+P I+ L A F+ +DL SG+HQ+ ++E DIPKT F + G YEFL + FGL NAPA+ +++ + +E + V+IDDI+
Subjt: YPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRVREEDIPKTTFRSHYGHYEFLVMSFGLTNAPAVSIELMNRVFKEFLETFVIVFIDDIL----------
Query: ----------------------------------------------------------------------------------------------------
Subjt: ----------------------------------------------------------------------------------------------------
Query: ----------------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQ----KGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHY
SF +LK L ++ +L P + + +DA +G VL Q + + IAY SR L + E NY T + E+ A++++L R Y
Subjt: ----------------SFEELKKRLVTAPVLTVPDRSGNLVVYSDALGKGLGCVLMQ----KGKVIAYASRQLKEYERNYPTHDLELAAVVFALKTWRHY
Query: LYGK-KVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSR
LYG ++V+TDH+ L + + N + +RW ++ Y+ E++Y PGK+NVV DALSR
Subjt: LYGK-KVQVFTDHKSLKYLFTQKELNMRQRRWLELVKNYDIEILYHPGKANVVVDALSR
|
|
