; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G010460 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010460
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionacyl-coenzyme A thioesterase 13
Genome locationCmo_Chr20:9585281..9588743
RNA-Seq ExpressionCmoCh20G010460
SyntenyCmoCh20G010460
Gene Ontology termsGO:0031047 - gene silencing by RNA (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0047617 - acyl-CoA hydrolase activity (molecular function)
InterPro domainsIPR003736 - Phenylacetic acid degradation-related domain
IPR006683 - Thioesterase domain
IPR029069 - HotDog domain superfamily
IPR039298 - Acyl-coenzyme A thioesterase 13


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571321.1 Acyl-coenzyme A thioesterase 13, partial [Cucurbita argyrosperma subsp. sororia]2.8e-7698.06Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVAS+IDALP RFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDA+VLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_022931994.1 acyl-coenzyme A thioesterase 13 [Cucurbita moschata]1.1e-77100Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_022973825.1 acyl-coenzyme A thioesterase 13 [Cucurbita maxima]1.8e-7596.77Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVAS+IDALP RFYENFVMTD+RVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVAL TLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDA+VLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_023512633.1 acyl-coenzyme A thioesterase 13 [Cucurbita pepo subsp. pepo]3.8e-7396.13Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKH  DDDRK+AS+IDALP RFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDA+VLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

XP_038901620.1 acyl-coenzyme A thioesterase 13 [Benincasa hispida]1.3e-6890.32Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEK KRYLEKH  DDDR VAS+IDALP RFYENF+MT LRVDLI+PGRIVCSLKVPARLLN NNSLHGGASASLVDCIGS ALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEID++VLR+GKTIAVINVELRRKGNGKIIAQGRHTKYLA SSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

TrEMBL top hitse value%identityAlignment
A0A1S3CCW9 acyl-coenzyme A thioesterase 131.6e-6485.81Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEK  DD     AS+ID LP RFYENF+MT +RVDLI+PGRI+CSLKVPARLLNENNSLHGGASASLVDCIGS ALKTLGA TTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEID++VLR+GKTIAVINVELRRK NGKIIAQGRHTKYLA SSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A5D3BST3 CCR4-NOT transcription complex subunit 111.6e-6485.81Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEK  DD     AS+ID LP RFYENF+MT +RVDLI+PGRI+CSLKVPARLLNENNSLHGGASASLVDCIGS ALKTLGA TTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEID++VLR+GKTIAVINVELRRK NGKIIAQGRHTKYLA SSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A6J1E0I3 acyl-coenzyme A thioesterase 13 isoform X14.8e-6681.94Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDD DDR +AS+ID LP RFYE FVMT LRVDLIEPGR+VCSLKVPARLLNENNSLHGGA+A+LVDCIGS A+KT G +TTGVS+EIN+S
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        Y+DAAYLDE+IEI+++VLR+GKTIAV+NVELR+K NGKI+AQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A6J1EVT6 acyl-coenzyme A thioesterase 135.5e-78100Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

A0A6J1ICC5 acyl-coenzyme A thioesterase 138.8e-7696.77Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        MEKTKRYLEKHDDDDDRKVAS+IDALP RFYENFVMTD+RVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVAL TLGANTTGVSLEINLS
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAAYLDEEIEIDA+VLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

SwissProt top hitse value%identityAlignment
P34419 Putative esterase F42H10.65.1e-1235.09Show/hide
Query:  NFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELR
        N V  D+    +   ++VC + V  + LN   +LHGG +A+L D I + A+     +    S+E+ +SYL    + + +EI A VL++G+T+A  + E R
Subjt:  NFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELR

Query:  RKGNGKIIAQGRHT
        RK +GK+ A+G+HT
Subjt:  RKGNGKIIAQGRHT

P87304 Putative esterase C31F10.023.5e-1334.65Show/hide
Query:  DALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDA-AYLDEEIEIDARVLRLGK
        D + +  ++  V++D+++    PG + CSLK+    LN   +LHGG  A+L D  GS+AL + G   +GVS+++N ++L +   L   I + A+  RLG 
Subjt:  DALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDA-AYLDEEIEIDARVLRLGK

Query:  TIAVINVELRRKGNGKIIAQGRHTKYL
         IA  +V+     N ++ A+GRHTK++
Subjt:  TIAVINVELRRKGNGKIIAQGRHTKYL

Q5R833 Acyl-coenzyme A thioesterase 131.1e-1946.15Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRH
        PG+++C +KV     N   +LHGG +A+LVD I ++AL        GVS+++N++Y+  A L E+I I A VL+ GKT+A  +V+L  K  GK+IAQGRH
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRH

Query:  TKYL
        TK+L
Subjt:  TKYL

Q9CQR4 Acyl-coenzyme A thioesterase 134.3e-1944.23Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRH
        P +++C +KV  +  N+  +LHGG +A+LVD I ++AL        GVS+++N++Y+  A + EEI I A +L+ GKT+A  +V+L  K  GK+IAQGRH
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRH

Query:  TKYL
        TK+L
Subjt:  TKYL

Q9NPJ3 Acyl-coenzyme A thioesterase 131.1e-1946.15Show/hide
Query:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRH
        PG+++C +KV     N   +LHGG +A+LVD I ++AL        GVS+++N++Y+  A L E+I I A VL+ GKT+A  +V+L  K  GK+IAQGRH
Subjt:  PGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRH

Query:  TKYL
        TK+L
Subjt:  TKYL

Arabidopsis top hitse value%identityAlignment
AT1G04290.1 Thioesterase superfamily protein7.2e-4659.35Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS
        +E  K+YLE   D+D++     +  LP RF E FV   L+VDLIEPGRIVCS+K+P  LLN    LHGGA+A+LVD IGS  + T GA+ +GVS+EIN+S
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLS

Query:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        YLDAA+LDEEIEI+++ LR+GK +AV++VELR+K  GKIIAQGRHTKY A  S L
Subjt:  YLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL

AT1G52191.1 Thioesterase superfamily protein6.3e-1034.21Show/hide
Query:  FVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVIN---VE
        F++  L+V  +  G + C L V   +LNE+ +LH  A   L++ +G++A+ + G + T  S+++N S    A + EEI+I+ARV  +GK    +N   +E
Subjt:  FVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEEIEIDARVLRLGKTIAVIN---VE

Query:  LRRKGNGKIIAQGR
        +RR+   ++IA GR
Subjt:  LRRKGNGKIIAQGR

AT2G29590.1 Thioesterase superfamily protein2.2e-1837.34Show/hide
Query:  MEKTKRYLEKHDDDDDRKVASSIDAL---PSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEI
        MEK   YL+  D+  D   A  ++        FYENF +  +RV+ +EPG I CS KVP RL + + +L  GA A+LVD +G   +   G     VS+++
Subjt:  MEKTKRYLEKHDDDDDRKVASSIDAL---PSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEI

Query:  NLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL
        ++++L  A L EE+EI +R+L          V +R K  G+IIA+GRH+ +   +SKL
Subjt:  NLSYLDAAYLDEEIEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGACGAAGAGATACCTGGAGAAGCATGATGATGATGATGATCGGAAGGTTGCGTCCTCCATTGATGCCCTTCCTTCCAGATTTTACGAAAACTTTGTGATGAC
CGATCTGCGCGTTGATCTCATCGAACCTGGTCGGATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTCAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCAC
TCGTCGACTGTATTGGTTCTGTAGCGTTAAAGACTTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGAGGAA
ATCGAGATCGATGCGAGGGTTTTGCGATTGGGAAAGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGCAATGGTAAAATTATTGCTCAGGGTCGCCACACCAA
GTACCTTGCCATCTCAAGCAAATTGTAG
mRNA sequenceShow/hide mRNA sequence
TATAAAAACTCATTCTCGGAGTGGATAAACCAGTTTTGGGAAATTTTGGAAATGAGATAATCTTACAGAGTGAGCGATGGAGAAGACGAAGAGATACCTGGAGAAGCATG
ATGATGATGATGATCGGAAGGTTGCGTCCTCCATTGATGCCCTTCCTTCCAGATTTTACGAAAACTTTGTGATGACCGATCTGCGCGTTGATCTCATCGAACCTGGTCGG
ATCGTTTGCTCTCTCAAAGTCCCCGCTCGTTTGCTCAACGAGAATAATTCCTTGCACGGAGGAGCCTCGGCGTCACTCGTCGACTGTATTGGTTCTGTAGCGTTAAAGAC
TTTGGGCGCTAACACCACTGGAGTCTCCCTTGAAATTAACCTCTCCTATCTGGATGCTGCTTATCTCGACGAGGAAATCGAGATCGATGCGAGGGTTTTGCGATTGGGAA
AGACCATTGCAGTAATTAATGTTGAATTGAGGAGAAAAGGCAATGGTAAAATTATTGCTCAGGGTCGCCACACCAAGTACCTTGCCATCTCAAGCAAATTGTAGTTATAA
ACTCGTTTCAACATTAGAGTACCGCCAACAATTCCTCTGCTTCATGAACTGACATGGCATCTTACGTTTCTATACCTTCATCTGAAACAAAGACTTTGTTGCTGATATAA
TTCTTATAATCTGTTGCTATTGCTGAAATAATTTCATCTGATGCCTTCTTTTTAAATATCTGTTCCTCAAATGAGAATAGCACGGTAAGGACGTTTAGTTTTTGTTTTTA
TCGAAACGTTCATGGAACTAAAGTAGGATTCATACAGGTAATATGTAAGCTTCTTAGGTAGGATTATCAATAGATTGGTTGTTGGCACTTGTTGACAGGCCGAGAGCTTC
TCCTAAATTCATCGGTCCTCTCATCGTCCTC
Protein sequenceShow/hide protein sequence
MEKTKRYLEKHDDDDDRKVASSIDALPSRFYENFVMTDLRVDLIEPGRIVCSLKVPARLLNENNSLHGGASASLVDCIGSVALKTLGANTTGVSLEINLSYLDAAYLDEE
IEIDARVLRLGKTIAVINVELRRKGNGKIIAQGRHTKYLAISSKL