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CmoCh20G010490 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010490
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionVesicle transport protein
Genome locationCmo_Chr20:9602980..9605540
RNA-Seq ExpressionCmoCh20G010490
SyntenyCmoCh20G010490
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0016192 - vesicle-mediated transport (biological process)
GO:0000139 - Golgi membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR011691 - Vesicle transport protein SFT2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022932026.1 vesicle transport protein SFT2B isoform X1 [Cucurbita moschata]1.8e-29100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

XP_022973823.1 vesicle transport protein SFT2B isoform X1 [Cucurbita maxima]1.8e-29100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

XP_023512397.1 vesicle transport protein SFT2B isoform X1 [Cucurbita pepo subsp. pepo]1.8e-29100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

XP_023512399.1 vesicle transport protein SFT2B isoform X3 [Cucurbita pepo subsp. pepo]1.8e-29100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

XP_023522029.1 vesicle transport protein SFT2B-like, partial [Cucurbita pepo subsp. pepo]1.8e-29100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

TrEMBL top hitse value%identityAlignment
A0A0A0LMG7 Vesicle transport protein3.7e-2588.57Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDD--EASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDD  EASTATI+D +SSWFMDDFNRNCTLSTKQR YGFAICFV+G+TCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDD--EASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

A0A1S3CDD0 Vesicle transport protein3.7e-2588.57Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDE  ASTATI+D +SSWFMDDFNRNCTLSTKQR YGFAICFV+G+TCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

A0A6J1E0X7 Vesicle transport protein4.6e-2381.43Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        M+KMNQAFEKMKMLVGVE D+E  A+TAT++D +SSWFMDDFNRNCTLSTKQR YGFAICF +GLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDE--ASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

A0A6J1EV79 Vesicle transport protein8.6e-30100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

A0A6J1IE99 Vesicle transport protein8.6e-30100Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G23550.1 Got1/Sft2-like vescicle transport protein family2.6e-1864.71Show/hide
Query:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM
        M+KMNQA EKMKMLVG+EV+DE   A  ++++S  FM+D NRNC L+TKQR YGFAIC  +GLTCTL+
Subjt:  MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGATGAATCAGGCGTTCGAGAAAATGAAAATGTTGGTAGGAGTTGAGGTGGACGACGAAGCTTCTACTGCTACCATCAATGACGATAACTCTTCCTGGTTTAT
GGACGATTTCAACCGCAATTGCACGCTATCCACCAAACAGCGATTATATGGTTTTGCCATTTGCTTTGTTTCTGGCTTAACATGTACGTTGATGGTAAGTATCCCTGAAA
CTAATATTCATTTACTCATACTATCTCTTAAGTGCAATGTTGACTTGATAATAGAAAGTGATCTTTTCGTTTGTAATGCAACTGAAAGTGTGTGTCCAAGATGA
mRNA sequenceShow/hide mRNA sequence
TGGACCTTGACGGCGACGGGGGAATGGGTTGCTGGTGAATTGGGAGATTGCTGGTGGCAATTTTTTGCTTCAATCAGCCGAAGTATCCATTCTGTACATGCCTTTGCTTT
AGATCTCTCTGAATTTCCTCTGTTCTTCTCCCTTTCCCTCCCTCTTGCCATAATTTGCAGCAGAATTTGAAGCGTCGGTGGCGGAGTCATGGAGAAGATGAATCAGGCGT
TCGAGAAAATGAAAATGTTGGTAGGAGTTGAGGTGGACGACGAAGCTTCTACTGCTACCATCAATGACGATAACTCTTCCTGGTTTATGGACGATTTCAACCGCAATTGC
ACGCTATCCACCAAACAGCGATTATATGGTTTTGCCATTTGCTTTGTTTCTGGCTTAACATGTACGTTGATGGTAAGTATCCCTGAAACTAATATTCATTTACTCATACT
ATCTCTTAAGTGCAATGTTGACTTGATAATAGAAAGTGATCTTTTCGTTTGTAATGCAACTGAAAGTGTGTGTCCAAGATGA
Protein sequenceShow/hide protein sequence
MEKMNQAFEKMKMLVGVEVDDEASTATINDDNSSWFMDDFNRNCTLSTKQRLYGFAICFVSGLTCTLMVSIPETNIHLLILSLKCNVDLIIESDLFVCNATESVCPR