CuGenDBv2

Gene ID	CmoCh20G010530
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Eukaryotic translation initiation factor 6
Genome location	Cmo_Chr20:9696405..9699019
RNA-Seq Expression	CmoCh20G010530
Synteny	CmoCh20G010530
Gene Ontology terms	GO:0000054 - ribosomal subunit export from nucleus (biological process) GO:0000460 - maturation of 5.8S rRNA (biological process) GO:0000470 - maturation of LSU-rRNA (biological process) GO:0006413 - translational initiation (biological process) GO:0042256 - mature ribosome assembly (biological process) GO:1902626 - assembly of large subunit precursor of preribosome (biological process) GO:0005730 - nucleolus (cellular component) GO:0005829 - cytosol (cellular component) GO:0030687 - preribosome, large subunit precursor (cellular component) GO:0003743 - translation initiation factor activity (molecular function) GO:0043022 - ribosome binding (molecular function) GO:0043023 - ribosomal large subunit binding (molecular function)
InterPro domains	IPR002769 - Translation initiation factor IF6

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022147757.1 eukaryotic translation initiation factor 6-2 [Momordica charantia]

2.0e-129

97.55

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

XP_022931983.1 eukaryotic translation initiation factor 6-2-like [Cucurbita moschata]

6.7e-133

100

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

XP_022948101.1 eukaryotic translation initiation factor 6-2 [Cucurbita moschata]

2.6e-129

96.73

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

XP_022973842.1 eukaryotic translation initiation factor 6-2 [Cucurbita maxima]

3.3e-132

99.59

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

XP_038900322.1 eukaryotic translation initiation factor 6-2 [Benincasa hispida]

2.6e-129

96.73

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS FE+ELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTS+EDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIV+EMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

TrEMBL top hits

e value

%identity

Alignment

A0A6J1D392 Eukaryotic translation initiation factor 6

9.8e-130

97.55

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVK SIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVAL HTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGL AN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DW AFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

A0A6J1F0A8 Eukaryotic translation initiation factor 6

3.3e-133

100

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

A0A6J1G8F7 Eukaryotic translation initiation factor 6

1.3e-129

96.73

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

A0A6J1I8L9 Eukaryotic translation initiation factor 6

1.6e-132

99.59

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSVIESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

A0A6J1L2F0 Eukaryotic translation initiation factor 6

1.3e-129

96.73

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA RLMFENSCEIGVFSKLTNAYCLVAIGGSENFYS+FE+EL GVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGNTI+CNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWTAFCGSDTTATELSV+ESVFKLRE QPSSIVDEMRKSLIDSYV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

SwissProt top hits

e value

%identity

Alignment

O55135 Eukaryotic translation initiation factor 6

2.2e-102

74.9

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTNAYCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL E +PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS

P56537 Eukaryotic translation initiation factor 6

2.2e-102

75.31

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL E QPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS

Q3KRD8 Eukaryotic translation initiation factor 6

6.4e-102

74.49

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CE+G F+KLTN YCLVAIGGSENFYS FE EL   IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RNSLPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL E +PS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS

Q9M060 Eukaryotic translation initiation factor 6-2

8.6e-123

87.35

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN I+CND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLRE QPSSIVDEMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

Q9TU47 Eukaryotic translation initiation factor 6

7.5e-103

75.31

Show/hide

Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MA R  FEN+CEIG F+KLTN+YCLVAIGGSENFYS FE EL G IPVV  SI G RIIGR+C GN++GLLVP+ TTDQELQH+RN LPD V ++R++ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN  +CND+VAL H DLDRETEE++ADVL VEVFRQTVA  VLVGSYC F+N+GGLVHP TSIED DELS+LLQVPLVAGTVNRGSEVIAAG++ N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS
        DW AFCG DTT+TELSV+ESVFKL E QPS+I   MR SLIDS
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDS

Arabidopsis top hits

e value

%identity

Alignment

AT2G39820.1 Translation initiation factor IF6

2.9e-94

67.61

Show/hide

Query:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ
        MATRL ++ N+CEIGVFSKLTNAYCLV A   S NF++ +ES+L GVIP+V TSI G+  IG LC GNKNGLL+ HT TDQELQHLR+SLPD+VVVQRI+
Subjt:  MATRLMFE-NSCEIGVFSKLTNAYCLV-AIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQ

Query:  ERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI
        E + ALGN I+CND+VAL H  L+++TEE+I+DVLGVEV+RQT+A N LVGSYCS +N GG+VH +T++E++ EL+ L+QVPLVAGTVNRGS+VI+AGL 
Subjt:  ERLSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLI

Query:  ANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
         NDWTAFCGSDTTA ELSV+ ++FKL + QP  +  EMRKSLID+YV
Subjt:  ANDWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

AT3G55620.1 Translation initiation factor IF6

6.1e-124

87.35

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Query:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER
        MATRL FEN+CE+GVFSKLTNAYCLVAIGGSENFYSAFESEL  VIP+VKTSI GTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRI ER
Subjt:  MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQER

Query:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN
        LSALGN I+CND+VAL HTDLD+ETEE+IADVLGVEVFRQT+AGN+LVGSYC+ +N+GG+VHPHTS+EDL+ELSTLLQVPLVAGTVNRGSEVIAAG+  N
Subjt:  LSALGNTISCNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIAN

Query:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV
        DWT+FCGSDTTATELSVI+S+FKLRE QPSSIVDEMRKSLID+YV
Subjt:  DWTAFCGSDTTATELSVIESVFKLREGQPSSIVDEMRKSLIDSYV

Sequences

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CDS sequence

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ATGGCGACCAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACAAATGCTTATTGCTTGGTTGCAATTGGTGGCTCTGAGAACTTCTACAGTGC
CTTTGAATCTGAATTAGGCGGTGTCATTCCGGTCGTTAAAACATCCATCGATGGCACGCGCATTATTGGTCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCAC
ACACCACTACTGATCAAGAACTTCAGCATTTGAGAAACAGCCTACCTGACCAAGTTGTTGTCCAACGTATACAAGAGAGACTGTCTGCTCTGGGGAATACAATTTCTTGT
AATGATCATGTTGCTCTCACACATACTGATCTCGACCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTAGAGGTCTTTAGGCAGACGGTAGCAGGCAACGTTCT
CGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCCATTGAAGATTTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTG
GAACAGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGATAGCAAATGACTGGACTGCATTTTGTGGTTCAGACACGACTGCGACCGAGTTATCGGTGATCGAGAGC
GTTTTCAAATTGAGGGAGGGTCAACCAAGCTCCATTGTTGATGAAATGAGGAAGTCGCTAATAGACAGTTACGTGTGA

mRNA sequence

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Protein sequence

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MATRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSAFESELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTISC
NDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSIEDLDELSTLLQVPLVAGTVNRGSEVIAAGLIANDWTAFCGSDTTATELSVIES
VFKLREGQPSSIVDEMRKSLIDSYV

CmoCh20G010530 (gene) of Cucurbita moschata (Rifu) v1 genome