CuGenDBv2

Gene ID	CmoCh20G010640
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	Unknown protein
Genome location	Cmo_Chr20:9837890..9838336
RNA-Seq Expression	CmoCh20G010640
Synteny	CmoCh20G010640
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6571341.1 hypothetical protein SDJN03_30256, partial [Cucurbita argyrosperma subsp. sororia]

2.9e-70

98.65

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA SANDTNDDD NNNNNS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS

Query:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

KAG7011114.1 hypothetical protein SDJN02_27912, partial [Cucurbita argyrosperma subsp. argyrosperma]

5.8e-71

99.32

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDD NNNNNS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS

Query:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

XP_008460874.1 PREDICTED: putative uncharacterized protein DDB_G0283431 [Cucumis melo]

1.2e-44

68.21

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPE+EST WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        N+ ND++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  N-SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        N SS ESPR D   +  ED NN DQR+SN SSNNSI+SRESE+P AI+M S
Subjt:  N-SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

XP_022931986.1 uncharacterized protein LOC111438319 [Cucurbita moschata]

6.2e-73

100

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS

Query:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

XP_038900833.1 uncharacterized protein LOC120087896 [Benincasa hispida]

1.1e-45

70.2

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPETE+TAWLPVAGLSLVCLPWFFW+LTFFYRVISRACGFRVS+ +     A++ N ++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  NSSGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        N+S ESPR D   +  EED +N DQRRSN SSNNSI SRESE+P AI+MGS
Subjt:  NSSGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJX6 Uncharacterized protein

1.3e-44

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  ILSGG CLL+Y+ILPETE+TAWLP+ GLSLVCLPWFFW+LTFFYRV+SRACGFRVSL +    S+N+ N ++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  NSSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
         SS ES + D   +  ED NN DQR SN SSNNSI+SRESE+P AI+M S
Subjt:  NSSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A1S3CDW9 Uncharacterized protein

5.9e-45

68.21

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPE+EST WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        N+ ND++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  N-SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        N SS ESPR D   +  ED NN DQR+SN SSNNSI+SRESE+P AI+M S
Subjt:  N-SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A5A7TCV0 Uncharacterized protein

5.9e-45

68.21

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN
        MSLV+PSAGRAF+W V   LF  I+SGG CLL+Y+ILPE+EST WLP+ GLSLVCLPWFFW+LTFFYRVISRACG+RVSL        N+ ND++NNNNN
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMA--TSANDTNDDDNNNNN

Query:  N-SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        N SS ESPR D   +  ED NN DQR+SN SSNNSI+SRESE+P AI+M S
Subjt:  N-SSGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A6J1EV39 uncharacterized protein LOC111438319

3.0e-73

100

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
        MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS

Query:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
        SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
Subjt:  SGESPRCDARAQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

A0A6J1G7P7 uncharacterized protein LOC111451588

5.7e-40

65.1

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS
        MSLVDPS GR  +W V F LFL +LSGG CLL+YI LPETE+TAWLPVAGLSLVCLPWFFW LTF YR+ISRACGFRVSL +  + +    ++ N +NN+
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNS

Query:  SGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
          ESP+ DA  QA +EDGN   QR+SN SSN+S  SRESE P AI+MGS
Subjt:  SGESPRCDARAQA-EEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT4G30770.1 Putative membrane lipoprotein

5.5e-19

39.62

Show/hide

Query:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTN--------DD
        M + DP AG+AF+  +   LFL I  GG CL+ Y ILP      WL   G+  VCLPWFFWILTF YR++SR  GFR+ +    + N+ N        D 
Subjt:  MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTN--------DD

Query:  DNNNNNNSSGESPRCDARAQAE---EDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS
           +  +   + P   A  Q +       N  ++R + SSN++I S ESE+P AISM S
Subjt:  DNNNNNNSSGESPRCDARAQAE---EDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGTCTTTGGTCGATCCCTCAGCTGGACGTGCATTCGTATGGTTCGTCTTTTTCTCTCTCTTCCTCTGCATTCTCAGCGGCGGAGCTTGCCTTTTGGTGTACATAATCCT
ACCGGAGACCGAATCCACCGCATGGCTACCAGTCGCTGGCTTGTCGTTGGTTTGTCTCCCTTGGTTCTTTTGGATCTTGACCTTCTTCTATAGAGTCATCTCGCGTGCAT
GTGGTTTTCGAGTCTCCCTTGCCATGGCCACGAGCGCAAATGATACGAACGACGACGACAACAACAACAATAATAATTCGTCTGGTGAATCCCCTCGATGCGATGCAAGG
GCTCAAGCAGAGGAGGATGGCAACAATGACGATCAAAGGCGAAGCAATTTGTCGTCCAACAACTCGATAATGTCTCGTGAGAGTGAAATTCCATTTGCCATATCAATGGG
GTCGTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MSLVDPSAGRAFVWFVFFSLFLCILSGGACLLVYIILPETESTAWLPVAGLSLVCLPWFFWILTFFYRVISRACGFRVSLAMATSANDTNDDDNNNNNNSSGESPRCDAR
AQAEEDGNNDDQRRSNLSSNNSIMSRESEIPFAISMGS

CmoCh20G010640 (gene) of Cucurbita moschata (Rifu) v1 genome