; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G010690 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010690
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionGamma-secretase subunit PEN-2
Genome locationCmo_Chr20:9902774..9907008
RNA-Seq ExpressionCmoCh20G010690
SyntenyCmoCh20G010690
Gene Ontology termsGO:0007219 - Notch signaling pathway (biological process)
GO:0005798 - Golgi-associated vesicle (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0070765 - gamma-secretase complex (cellular component)
InterPro domainsIPR019379 - Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571347.1 putative gamma-secretase subunit PEN-2, partial [Cucurbita argyrosperma subsp. sororia]2.7e-70100Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLT
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLT
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLT

KAG7011118.1 putative gamma-secretase subunit PEN-2 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-7299.27Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVL SHSFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022931973.1 probable gamma-secretase subunit PEN-2 [Cucurbita moschata]7.5e-73100Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_022971629.1 probable gamma-secretase subunit PEN-2 [Cucurbita maxima]9.1e-7198.54Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSN NPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

XP_023532347.1 probable gamma-secretase subunit PEN-2 [Cucurbita pepo subsp. pepo]1.7e-6490.58Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAI
        ME+S N N+NPN NP RIQN VSS IA LWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SHSFPRIRPYIVGSAIGFA+FMAI
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAI

Query:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        ISSWALTF+IGGERLFGPVW+KLVMYNLADKLGLTGWS
Subjt:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

TrEMBL top hitse value%identityAlignment
A0A0A0LK38 Uncharacterized protein1.1e-6187.59Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        ME  QN N+N N NP    N +SSPI VLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGF VFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTF+IGGERLFGPVWDKLVMYNLADK+GLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1F097 probable gamma-secretase subunit PEN-23.6e-73100Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1G5B2 probable gamma-secretase subunit PEN-21.4e-6490.58Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAI
        ME+SQN N+NPN NP RIQN VSS IA LWPTID SLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SHSFPRIRPYIVGSAIGFA+FMAI
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAI

Query:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        ISSWALTF+IGGERLFGPVW+KLVMYNLADKLGLTGWS
Subjt:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1I943 probable gamma-secretase subunit PEN-24.4e-7198.54Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII
        MENSQNSNSN NPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRS SFPRIRPYIVGSAIGFAVFMAII
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAII

Query:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
Subjt:  SSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

A0A6J1L2H7 probable gamma-secretase subunit PEN-27.5e-6389.86Show/hide
Query:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAI
        ME+SQN N+ PN NP RIQN VSS IA LWPTID SLGLS EESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR SHSFPRIRPYIVGSAIGFAVFMAI
Subjt:  MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAI

Query:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS
        ISSWALTF+IGGERLFGPVW+KLVMYNLADKLGLTGWS
Subjt:  ISSWALTFAIGGERLFGPVWDKLVMYNLADKLGLTGWS

SwissProt top hitse value%identityAlignment
Q5G235 Gamma-secretase subunit PEN-28.7e-0834.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P     S  +I+ Y+  SA+GF +++ ++S+W   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Q6QI68 Gamma-secretase subunit PEN-22.5e-0733.33Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P     S  +I+ Y+  SA+GF  ++ ++++W   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Q9CQR7 Gamma-secretase subunit PEN-21.9e-0734.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P     S  +I+ Y+  SA+GF  ++ I+++W   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Q9FY84 Probable gamma-secretase subunit PEN-23.5e-4970.45Show/hide
Query:  QNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAIISSW
        +N N NPNPNP  +  ++SS  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR S +FP+IR Y+V SAIGF+VF A++S+W
Subjt:  QNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAIISSW

Query:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG
        ALTF+IGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG

Q9NZ42 Gamma-secretase subunit PEN-21.1e-0734.41Show/hide
Query:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY
        +S EE ++  R++Y  GFA LPFLW VN F+F+      P     S  +I+ Y+  SA+GF  ++ +++SW   F     +++ P W  L  Y
Subjt:  LSEEESVSYARRFYKFGFALLPFLWAVNCFYFW------PVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIGGERLFGPVWDKLVMY

Arabidopsis top hitse value%identityAlignment
AT5G09310.1 CONTAINS InterPro DOMAIN/s: Gamma-secretase aspartyl protease complex, presenilin enhancer-2 subunit (InterPro:IPR019379); Has 168 Blast hits to 168 proteins in 71 species: Archae - 0; Bacteria - 0; Metazoa - 126; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).2.5e-5070.45Show/hide
Query:  QNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAIISSW
        +N N NPNPNP  +  ++SS  A +WPTIDG LGL+EE SV YARRFYKFGFALLP+LW VNCFYFWPVLR S +FP+IR Y+V SAIGF+VF A++S+W
Subjt:  QNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLR-SHSFPRIRPYIVGSAIGFAVFMAIISSW

Query:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG
        ALTF+IGGE+LFGP++DKLVMYN+AD+LGL+G
Subjt:  ALTFAIGGERLFGPVWDKLVMYNLADKLGLTG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACTCGCAGAATTCAAACAGCAATCCAAACCCTAATCCGATTCGCATCCAGAATCTTGTATCGTCGCCGATTGCTGTGTTATGGCCGACAATTGATGGCTCATT
GGGGCTGTCGGAGGAAGAATCGGTGAGCTATGCCCGCAGATTCTATAAATTTGGATTTGCATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTC
TTCGCTCTCACTCATTTCCTCGCATTCGTCCCTATATTGTTGGCTCAGCTATTGGTTTTGCTGTTTTCATGGCCATTATCTCGTCTTGGGCCTTGACATTTGCCATTGGA
GGTGAACGCCTCTTTGGACCTGTTTGGGATAAACTAGTGATGTACAACCTTGCTGACAAATTAGGATTAACAGGTTGGAGCTAG
mRNA sequenceShow/hide mRNA sequence
CCTAAAACTTCGGTTGGTCTTTGTGTTCAGAGTCATTGAAATTTGATTGCAATGGAGAACTCGCAGAATTCAAACAGCAATCCAAACCCTAATCCGATTCGCATCCAGAA
TCTTGTATCGTCGCCGATTGCTGTGTTATGGCCGACAATTGATGGCTCATTGGGGCTGTCGGAGGAAGAATCGGTGAGCTATGCCCGCAGATTCTATAAATTTGGATTTG
CATTGCTTCCATTTCTTTGGGCGGTTAATTGCTTCTACTTCTGGCCTGTTCTTCGCTCTCACTCATTTCCTCGCATTCGTCCCTATATTGTTGGCTCAGCTATTGGTTTT
GCTGTTTTCATGGCCATTATCTCGTCTTGGGCCTTGACATTTGCCATTGGAGGTGAACGCCTCTTTGGACCTGTTTGGGATAAACTAGTGATGTACAACCTTGCTGACAA
ATTAGGATTAACAGGTTGGAGCTAGTCTGGTTCCATTCCTTCAGCAACCAACTTCGACCTTGTTCTTGTATATTTTAAGATGTGTAACTCTCTACTGTCATTCTTTTCTT
GAAATATCAAAGTTGAAGCTTTTGGTTTCACTTCTCTGTGCTTCAAGTGTCAAACATAAACATAGAAGGGATCTCATATCAAACATCATTGAAATGAAAAATATCAGGTT
AAACAAACCCATGGTTTAAAGAACGCTTGTAATTTTATTGCCATGCTGATGCTGGTTAATAGTCAAATGCACACGTTTTGAAACGGTTCTCCCTGCAGCTGCATCGACAG
AGTTCTGTGGATTGAATTCTAAACTGGTTATCTGAAATTCTCCTTTGCTTCCCTTTTCTCCCACTTTCAATACTATAAGCTGTGCTCTGTTTTC
Protein sequenceShow/hide protein sequence
MENSQNSNSNPNPNPIRIQNLVSSPIAVLWPTIDGSLGLSEEESVSYARRFYKFGFALLPFLWAVNCFYFWPVLRSHSFPRIRPYIVGSAIGFAVFMAIISSWALTFAIG
GERLFGPVWDKLVMYNLADKLGLTGWS