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CmoCh20G010780 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010780
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUPF0235 protein C15orf40 homolog
Genome locationCmo_Chr20:10211910..10215038
RNA-Seq ExpressionCmoCh20G010780
SyntenyCmoCh20G010780
Gene Ontology termsNA
InterPro domainsIPR003746 - Protein of unknown function DUF167
IPR036591 - YggU-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008460904.1 PREDICTED: UPF0235 protein LHK_03181 [Cucumis melo]3.3e-5191.27Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        M PAKKGKTKA K TES +S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSR KVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

XP_022927983.1 uncharacterized protein LOC111434889 [Cucurbita moschata]2.8e-58100Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

XP_022971730.1 UPF0235 protein C15orf40 homolog [Cucurbita maxima]7.1e-5494.44Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        MAPAKKGKTKA K TES +S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

XP_023512400.1 UPF0235 protein C15orf40 homolog [Cucurbita pepo subsp. pepo]2.6e-5697.62Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        MAPAKKGKTKA KGTES ESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIG GS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

XP_038902101.1 UPF0235 protein C15orf40 homolog isoform X2 [Benincasa hispida]3.5e-5393.65Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        M PAKKGKTKA K TES +S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

TrEMBL top hitse value%identityAlignment
A0A0A0LMY2 Uncharacterized protein1.6e-5190.48Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        M PAKKGKTKA K TES +S +K+NNYPSCLRSVS SSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSR KVVIVE+VSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

A0A1S3CDI8 UPF0235 protein LHK_031811.6e-5191.27Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        M PAKKGKTKA K TES +S +KTNNYPSCLRSVS SSVAITIHAKPGSKIASITDF DDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQ+SIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSR KVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

A0A6J1CR98 uncharacterized protein LOC1110134511.1e-4786.51Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        M PAKKGKTKA K TES +S    N +PSCLRSV+ SSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDY+S+VLGVKRRQ+SIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQ+VFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

A0A6J1EMK4 uncharacterized protein LOC1114348891.4e-58100Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

A0A6J1I6J5 UPF0235 protein C15orf40 homolog3.5e-5494.44Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        MAPAKKGKTKA K TES +S LK NNYPSCLRSVSSSS+AITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKALT
        KSRDKVVIVEEVSLQSVFDALNKALT
Subjt:  KSRDKVVIVEEVSLQSVFDALNKALT

SwissProt top hitse value%identityAlignment
Q3ZBP8 UPF0235 protein C15orf40 homolog2.3e-1041.86Show/hide
Query:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVV-IVEEVSLQSVFDALNK
        V+I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  + +  G KSR+KVV ++     + + + L K
Subjt:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVV-IVEEVSLQSVFDALNK

Q505I4 UPF0235 protein C15orf40 homolog1.7e-1040.95Show/hide
Query:  PAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKS
        P K G T   KG   T+           + + S   V I IHAKPGSK  ++TD   +A+GV I AP  +GEANA L  Y+S VL +++  + +  G KS
Subjt:  PAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKS

Query:  RDKVV
        R+KVV
Subjt:  RDKVV

Q8GWQ6 UPF0235 protein At5g634402.1e-0831.63Show/hide
Query:  PSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL
        P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VLG++  Q+++  G  S+ K+++VE++S + V++ L +A+
Subjt:  PSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL

Q8WUR7 UPF0235 protein C15orf401.3e-1041.86Show/hide
Query:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVV-IVEEVSLQSVFDALNK
        V I IHAKPGSK  ++TD   +A+ V I AP  +GEANA L  Y+S VL +++  + +  G KSR+KVV ++   + + + + L K
Subjt:  VAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVV-IVEEVSLQSVFDALNK

Q9CRC3 UPF0235 protein C15orf40 homolog8.6e-1039.05Show/hide
Query:  PAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKS
        P K G T   KG   T+           + +     V I IHAKPGS+  ++TD   +A+GV I AP  +GEANA L  Y+S VL +++  + +  G KS
Subjt:  PAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKS

Query:  RDKVV
        R+KVV
Subjt:  RDKVV

Arabidopsis top hitse value%identityAlignment
AT1G49170.1 Protein of unknown function (DUF167)1.8e-3970.16Show/hide
Query:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS
        MAP KKGK K +   EST +  +++++P+CLR ++ SSVAITIHAKPGSK ASITD  D+A+GVQIDAPA+DGEANAALL+YMSSVLGVKRRQ+S+GSGS
Subjt:  MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGS

Query:  KSRDKVVIVEEVSLQSVFDALNKA
        KSRDKVVIVE+++ QSVF AL++A
Subjt:  KSRDKVVIVEEVSLQSVFDALNKA

AT5G63440.2 Protein of unknown function (DUF167)1.5e-0931.63Show/hide
Query:  PSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL
        P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VLG++  Q+++  G  S+ K+++VE++S + V++ L +A+
Subjt:  PSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL

AT5G63440.3 Protein of unknown function (DUF167)1.5e-0931.63Show/hide
Query:  PSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL
        P C+  +    V + I  +  ++ ++IT    D + V + APA  GEAN  LL++M  VLG++  Q+++  G  S+ K+++VE++S + V++ L +A+
Subjt:  PSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVEEVSLQSVFDALNKAL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCAGAAAGGTACTGAATCAACTGAATCGTGCCTCAAAACCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTC
TTCTGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAGACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAG
AAGCTAATGCTGCGCTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGACAATTATCTATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAG
GAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCCTTAACATGA
mRNA sequenceShow/hide mRNA sequence
CAAAACTCCGTTGGATTTTTGGAGGAAAATATTAAAAATTAAAGGGAGAAGAAAATGGCTCCGGCGAAGAAGGGGAAAACGAAAGCTCAGAAAGGTACTGAATCAACTGA
ATCGTGCCTCAAAACCAACAATTACCCTTCTTGTCTTCGCTCTGTTTCTTCTTCTTCTGTCGCCATTACCATCCACGCAAAGCCTGGCTCCAAGATCGCCTCTATCACAG
ACTTTGGCGATGATGCGTTGGGAGTGCAAATCGACGCACCTGCGAAAGATGGAGAAGCTAATGCTGCGCTTCTTGATTACATGAGCTCTGTTTTAGGTGTCAAAAGAAGA
CAATTATCTATAGGTTCTGGCTCTAAATCAAGAGACAAGGTTGTGATCGTGGAGGAGGTAAGCTTGCAAAGTGTTTTTGATGCTTTGAATAAAGCCTTAACATGATTCTA
TAGGCTCTTTGGAAGTGTACACCTTTTGACGGAATATCTGCATACTGTAATAAGTACAGGTGGATTAACTGCTATCTTGCTGCCGCAACATTTTAAGTTATACATCTAGA
TGTTACTCTTAGCTGTCTATATTGATTTAAACCTCAACAATATCTTAACCTGACTGCTAGCCTTATATACTTCTGCAAAGATGAGGTTTCAGTGAAATTCTTGTCTCAAC
ATAAAGGCGATTAATCTTTTTCTTGAGTATGTCCCCAAC
Protein sequenceShow/hide protein sequence
MAPAKKGKTKAQKGTESTESCLKTNNYPSCLRSVSSSSVAITIHAKPGSKIASITDFGDDALGVQIDAPAKDGEANAALLDYMSSVLGVKRRQLSIGSGSKSRDKVVIVE
EVSLQSVFDALNKALT