; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CmoCh20G010790 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G010790
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCmo_Chr20:10237387..10238034
RNA-Seq ExpressionCmoCh20G010790
SyntenyCmoCh20G010790
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044602 - RING-H2 finger protein ATL10/ATL75-79


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571357.1 RING-H2 finger protein ATL78, partial [Cucurbita argyrosperma subsp. sororia]9.1e-11898.6Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD+THPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
        TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV GP SPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_022927999.1 RING-H2 finger protein ATL78-like [Cucurbita moschata]1.7e-119100Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
        TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_022971702.1 RING-H2 finger protein ATL78-like [Cucurbita maxima]1.6e-11495.35Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
        MSA SISSPHQLIHHGDQVFYYSRKLLLHSSL  L+FTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD HPSS 
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
        T+AP+GVHKKAIKSFTMVQF+ DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_023512393.1 RING-H2 finger protein ATL78-like [Cucurbita pepo subsp. pepo]3.8e-11697.21Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD HPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
        T+APVGVHKKAIKSFTMVQFS DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV GP SPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN

Query:  LAPLDPEARVRNLWL
        L PLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

XP_038901957.1 RING-H2 finger protein ATL78-like [Benincasa hispida]1.1e-7874.34Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS
        MSA SIS+ H       + F+YSRKLLLH SLH L+FTA APS+ LH   E Y        TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFV+S
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS

Query:  DDTHPSSTTA-APVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGP
        DD   SS+TA A  GVHKKAIKSFT+VQFS +LNLPGLDSECVICLSDF  GEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLV T QKIAGV   
Subjt:  DDTHPSSTTA-APVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGP

Query:  T-SPPPPA-INLAPLDPEARVRNLWL
        + SPPPPA + +APLD EA VRNL L
Subjt:  T-SPPPPA-INLAPLDPEARVRNLWL

TrEMBL top hitse value%identityAlignment
A0A0A0LQ73 RING-type E3 ubiquitin transferase2.3e-7467.23Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTF--TADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS
        MS  SIS+ + L     QVF+YSRKLLLHSSLH L+F  T+ AP S +H   E Y      TFDTNVVMVLSVLLCALICSL LNSIIRCALKCSR +VS
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTF--TADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVS

Query:  DDTHPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVG---
        +D H    T    GVHKKAIKSFT+VQFS DLNLPGLD ECVICLS+F  G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT +KIAGV    
Subjt:  DDTHPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVG---

Query:  ----------GPTSPPPPA--INLAPLDPEARVRNLWL
                   P+ PPPP+  ++LAPL+PEA VRNL L
Subjt:  ----------GPTSPPPPA--INLAPLDPEARVRNLWL

A0A1S3CDJ3 RING-type E3 ubiquitin transferase1.1e-7669.92Show/hide
Query:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD--T
        +SI++    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      TFDTNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D   
Subjt:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD--T

Query:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------
        HP+ T+    GVHKKAIKSFT+VQFS DLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT +KIAGV       
Subjt:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------

Query:  ---GGPTSPPPP------AINLAPLDPEARVRNLWL
           G   SPPPP       +NLAPL+PEA VRNL L
Subjt:  ---GGPTSPPPP------AINLAPLDPEARVRNLWL

A0A5A7TCX2 RING-type E3 ubiquitin transferase1.1e-7669.92Show/hide
Query:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD--T
        +SI++    IHH  +VF YSRKLLLHSSLH L+FTA APS+V H   E Y      TFDTNVVMVLSVLLCALICSL LNS+IRCALKCSRF+VS+D   
Subjt:  VSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY------TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD--T

Query:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------
        HP+ T+    GVHKKAIKSFT+VQFS DLNLPGLDSECVICLS+FV G+KLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQT +KIAGV       
Subjt:  HPSSTTAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGV-------

Query:  ---GGPTSPPPP------AINLAPLDPEARVRNLWL
           G   SPPPP       +NLAPL+PEA VRNL L
Subjt:  ---GGPTSPPPP------AINLAPLDPEARVRNLWL

A0A6J1EJK6 RING-type E3 ubiquitin transferase8.1e-120100Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
        MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
        TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

A0A6J1I2P6 RING-type E3 ubiquitin transferase7.8e-11595.35Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST
        MSA SISSPHQLIHHGDQVFYYSRKLLLHSSL  L+FTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDD HPSS 
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSST

Query:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
        T+AP+GVHKKAIKSFTMVQF+ DLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN
Subjt:  TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAIN

Query:  LAPLDPEARVRNLWL
        LAPLDPEARVRNLWL
Subjt:  LAPLDPEARVRNLWL

SwissProt top hitse value%identityAlignment
P0C034 RING-H2 finger protein ATL101.1e-4448.39Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDDTHP
        MSA  + S  Q         + SRKLLLH+     T  A A   V   PL ++      NV+M+LS+L+C +IC LGL+ IIRCAL+ S RF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDDTHP

Query:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP
         S+T  ++  G+ KKA++ F +V +S ++NLPGLD ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G        
Subjt:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP

Query:  TSPPPP--AINLAPLDP
        T+ P     + + PL+P
Subjt:  TSPPPP--AINLAPLDP

Q6NML0 E3 ubiquitin-protein ligase ATL768.2e-4546.61Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHP
        MSA  + +  Q +       + +RKLLLH     ++L   A APS ++           NV+M+LSVL+C +IC LGL+ IIRCA  + SRF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHP

Query:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP
         ST  +++  G+ KKA++ F +V +S ++NLPG+  ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G        
Subjt:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP

Query:  TSPPPPA--INLAPLDPEARV
         S P  +  + + PL+PE RV
Subjt:  TSPPPPA--INLAPLDPEARV

Q6NQG7 RING-H2 finger protein ATL783.4e-5156Show/hide
Query:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---DTHPSSTTAAPVGVHKKAIKSFTMV
        YSRKLL H+   + T    APS      +    FD NVVMVLSVLLCAL+CSLGLNSIIRCAL+CS  V S+   D +P   T    GV +KA+KSF  V
Subjt:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---DTHPSSTTAAPVGVHKKAIKSFTMV

Query:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVG-----GPTSPPPPAI--NLAPLDPEARVR
         +S++LNLPGLD+EC ICLS+FV  E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QT +KIA          T PP  +I   +APL+PE  +R
Subjt:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVG-----GPTSPPPPAI--NLAPLDPEARVR

Q94BY6 RING-H2 finger protein ATL757.0e-4449.02Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHPSSTT--AAPVGVHKKAIKSF
        + SRKLLLH+     T  A A   V   PL ++      NV+M+LSVL+C +IC LGL+ IIRCA  + S F++S+     ST   ++  G++KKA++ F
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHPSSTT--AAPVGVHKKAIKSF

Query:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG---VGGPTSPPPPA---INLAPLDPEAR
         +V +S ++NLPGL  ECVICLSDFV GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+T QKI G        +  P A   + +APL+PE R
Subjt:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG---VGGPTSPPPPA---INLAPLDPEAR

Query:  VRNL
        V  L
Subjt:  VRNL

Q9LS99 RING-H2 finger protein ATL773.8e-4248.5Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDDTHPSST---TAAPVGVHKKAIKSFT
        + SRKL     L  + F  +A  +  H P +      NV+M+LS+LLC +ICSLGL+ IIRCA   SR F++SD     ST   ++   G+ KKA+K   
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDDTHPSST---TAAPVGVHKKAIKSFT

Query:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKI------AGVGGPTSPPPPAINLAPLDPEARV
        +V +S ++NLPG+  ECVICLSDFV GE+LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV T QK+      A     T+     I ++PL+PEARV
Subjt:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKI------AGVGGPTSPPPPAINLAPLDPEARV

Arabidopsis top hitse value%identityAlignment
AT1G49200.1 RING/U-box superfamily protein4.9e-4549.02Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHPSSTT--AAPVGVHKKAIKSF
        + SRKLLLH+     T  A A   V   PL ++      NV+M+LSVL+C +IC LGL+ IIRCA  + S F++S+     ST   ++  G++KKA++ F
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHPSSTT--AAPVGVHKKAIKSF

Query:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG---VGGPTSPPPPA---INLAPLDPEAR
         +V +S ++NLPGL  ECVICLSDFV GE++R+LPKC+HGFHV+CIDKWL  H +CPKCR CLV+T QKI G        +  P A   + +APL+PE R
Subjt:  TMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG---VGGPTSPPPPA---INLAPLDPEAR

Query:  VRNL
        V  L
Subjt:  VRNL

AT1G49210.1 RING/U-box superfamily protein5.8e-4646.61Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHP
        MSA  + +  Q +       + +RKLLLH     ++L   A APS ++           NV+M+LSVL+C +IC LGL+ IIRCA  + SRF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSL--HALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCAL-KCSRFVVSDDTHP

Query:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP
         ST  +++  G+ KKA++ F +V +S ++NLPG+  ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G        
Subjt:  SST--TAAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP

Query:  TSPPPPA--INLAPLDPEARV
         S P  +  + + PL+PE RV
Subjt:  TSPPPPA--INLAPLDPEARV

AT1G49220.1 RING/U-box superfamily protein7.6e-4648.39Show/hide
Query:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDDTHP
        MSA  + S  Q         + SRKLLLH+     T  A A   V   PL ++      NV+M+LS+L+C +IC LGL+ IIRCAL+ S RF++S+    
Subjt:  MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESY--TFDTNVVMVLSVLLCALICSLGLNSIIRCALKCS-RFVVSDDTHP

Query:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP
         S+T  ++  G+ KKA++ F +V +S ++NLPGLD ECVICLSDFV GE+LRLLPKCNHGFHV+CIDKWL  H +CPKCR CLV+T QKI G        
Subjt:  SSTT--AAPVGVHKKAIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAG----VGGP

Query:  TSPPPP--AINLAPLDP
        T+ P     + + PL+P
Subjt:  TSPPPP--AINLAPLDP

AT1G49230.1 RING/U-box superfamily protein2.4e-5256Show/hide
Query:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---DTHPSSTTAAPVGVHKKAIKSFTMV
        YSRKLL H+   + T    APS      +    FD NVVMVLSVLLCAL+CSLGLNSIIRCAL+CS  V S+   D +P   T    GV +KA+KSF  V
Subjt:  YSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSD---DTHPSSTTAAPVGVHKKAIKSFTMV

Query:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVG-----GPTSPPPPAI--NLAPLDPEARVR
         +S++LNLPGLD+EC ICLS+FV  E+++LLP C+HGFHV+CIDKWLSSHSSCP CR CL+QT +KIA          T PP  +I   +APL+PE  +R
Subjt:  QFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVG-----GPTSPPPPAI--NLAPLDPEARVR

AT3G18773.1 RING/U-box superfamily protein2.7e-4348.5Show/hide
Query:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDDTHPSST---TAAPVGVHKKAIKSFT
        + SRKL     L  + F  +A  +  H P +      NV+M+LS+LLC +ICSLGL+ IIRCA   SR F++SD     ST   ++   G+ KKA+K   
Subjt:  YYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSR-FVVSDDTHPSST---TAAPVGVHKKAIKSFT

Query:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKI------AGVGGPTSPPPPAINLAPLDPEARV
        +V +S ++NLPG+  ECVICLSDFV GE+LR+LPKCNHGFH++CIDKWL+ H +CPKCR CLV T QK+      A     T+     I ++PL+PEARV
Subjt:  MVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKI------AGVGGPTSPPPPAINLAPLDPEARV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCATGCGCTCACCTT
CACTGCCGACGCTCCCTCCTCCGTCCTCCACCGCCCACTCGAATCCTACACCTTCGATACCAATGTAGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCAT
TAGGTCTCAACTCCATCATTAGATGTGCTTTGAAATGCTCTCGTTTTGTCGTCTCTGACGACACTCACCCCTCCTCTACCACCGCCGCCCCCGTCGGAGTCCACAAGAAA
GCTATCAAGAGCTTCACTATGGTTCAATTCTCCTCGGATCTCAACCTCCCTGGGCTCGACTCCGAGTGCGTTATTTGCTTGTCGGACTTCGTCGACGGCGAGAAGCTCCG
GCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCTTCTTGCCCTAAATGTCGCCAGTGTTTAGTTCAAACTTCTCAGA
AAATCGCCGGGGTCGGCGGTCCGACATCTCCTCCTCCTCCGGCCATCAACTTAGCGCCGCTAGATCCCGAAGCTCGGGTACGAAATTTATGGCTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGGCTGTTTCCATTTCTTCACCTCATCAGCTCATTCACCATGGAGATCAAGTGTTCTATTATTCAAGAAAGCTCCTCCTTCACTCCTCCCTCCATGCGCTCACCTT
CACTGCCGACGCTCCCTCCTCCGTCCTCCACCGCCCACTCGAATCCTACACCTTCGATACCAATGTAGTCATGGTCCTCTCCGTCCTCCTCTGCGCCTTAATTTGCTCAT
TAGGTCTCAACTCCATCATTAGATGTGCTTTGAAATGCTCTCGTTTTGTCGTCTCTGACGACACTCACCCCTCCTCTACCACCGCCGCCCCCGTCGGAGTCCACAAGAAA
GCTATCAAGAGCTTCACTATGGTTCAATTCTCCTCGGATCTCAACCTCCCTGGGCTCGACTCCGAGTGCGTTATTTGCTTGTCGGACTTCGTCGACGGCGAGAAGCTCCG
GCTTCTCCCCAAGTGCAACCATGGCTTCCATGTTAAGTGTATTGATAAATGGTTGAGTTCTCACTCTTCTTGCCCTAAATGTCGCCAGTGTTTAGTTCAAACTTCTCAGA
AAATCGCCGGGGTCGGCGGTCCGACATCTCCTCCTCCTCCGGCCATCAACTTAGCGCCGCTAGATCCCGAAGCTCGGGTACGAAATTTATGGCTGTAA
Protein sequenceShow/hide protein sequence
MSAVSISSPHQLIHHGDQVFYYSRKLLLHSSLHALTFTADAPSSVLHRPLESYTFDTNVVMVLSVLLCALICSLGLNSIIRCALKCSRFVVSDDTHPSSTTAAPVGVHKK
AIKSFTMVQFSSDLNLPGLDSECVICLSDFVDGEKLRLLPKCNHGFHVKCIDKWLSSHSSCPKCRQCLVQTSQKIAGVGGPTSPPPPAINLAPLDPEARVRNLWL