CuGenDBv2

Gene ID	CmoCh20G011030
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	terpene synthase 10-like
Genome location	Cmo_Chr20:10498882..10499468
RNA-Seq Expression	CmoCh20G011030
Synteny	CmoCh20G011030
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process) GO:0016102 - diterpenoid biosynthetic process (biological process) GO:0032044 - DSIF complex (cellular component) GO:0000287 - magnesium ion binding (molecular function) GO:0003729 - mRNA binding (molecular function) GO:0010333 - terpene synthase activity (molecular function)
InterPro domains	IPR001906 - Terpene synthase, N-terminal domain IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid IPR036965 - Terpene synthase, N-terminal domain superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

XP_022928104.1 terpene synthase 10-like [Cucurbita moschata]

2.2e-13

70.69

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+NFKDE K+FS +  +DLN +LSLYEA FLCIEGENILET KHFTINYLE +  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

XP_022971747.1 terpene synthase 10-like [Cucurbita maxima]

2.7e-14

74.14

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+NFKDE K+FSTR  +DLN MLSLYEA FLCIEGENILE  KHFTIN+LEK+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

XP_022971750.1 terpene synthase 10-like [Cucurbita maxima]

1.8e-15

77.59

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VFHNFKDE K+FSTR  QDLN MLSLYEA FLCIE ENILE  KHFTINYLEK+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

XP_023512338.1 terpene synthase 10-like [Cucurbita pepo subsp. pepo]

6.3e-16

77.59

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        ++FHNFKDE K+FSTR  QDLN MLSLYEA FLCIEGENILE  KHFTINYLEK+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

XP_023512342.1 terpene synthase 10-like [Cucurbita pepo subsp. pepo]

3.5e-14

72.41

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+N+ DE K+FSTR  +DLN MLSLYEA FLCIEGENILET KHFTINYL+K+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

TrEMBL top hits

e value

%identity

Alignment

A0A6J1EJ26 terpene synthase 10-like

4.1e-13

70.69

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+NF DE K+F+T   QDLN MLSLYEA FLCIEGENILE  K+FTINYLEK+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

A0A6J1EJW9 terpene synthase 10-like

1.1e-13

70.69

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+NFKDE K+FS +  +DLN +LSLYEA FLCIEGENILET KHFTINYLE +  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

A0A6J1EMY1 terpene synthase 10-like

1.2e-12

68.97

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+N+KDE K+FSTR  +DLN MLSLYE  FL IEGENILE  KHFTINYL+K+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

A0A6J1I2T8 terpene synthase 10-like

1.3e-14

74.14

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VF+NFKDE K+FSTR  +DLN MLSLYEA FLCIEGENILE  KHFTIN+LEK+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

A0A6J1I6L4 terpene synthase 10-like

8.9e-16

77.59

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS
        +VFHNFKDE K+FSTR  QDLN MLSLYEA FLCIE ENILE  KHFTINYLEK+  S
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSS

SwissProt top hits

e value

%identity

Alignment

B3TPQ7 Alpha-terpineol synthase, chloroplastic

6.2e-06

47.06

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Query:  VFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYL
        VF+ F D+  SF    C D+  MLSLYEA +L +EGE  L+  K FT  +L
Subjt:  VFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYL

Q50L36 Isoprene synthase, chloroplastic

2.1e-06

41.67

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSSSI
        + F  FKD+  +F     +D+  +LSLYEA FL +EGENIL+  K F I++L++     I
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSSSI

Q6PWU2 (-)-alpha-terpineol synthase

4.7e-06

43.4

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Query:  VFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEK
        VF  FKD+  SF    C+D+  ML LYEA +LC++GE+ +E  + F   +L K
Subjt:  VFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEK

Q7XAS7 Isoprene synthase, chloroplastic

2.1e-06

41.67

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSSSI
        + F  FKD+  +F     +D+  +LSLYEA FL +EGENIL+  K F I++L++     I
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSSSI

Q93X23 Myrcene synthase, chloroplastic

2.7e-09

54.55

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Query:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKF
        +VF++FKDER SF    C+D   MLSLYEA F  IEGENILE  + F+  +LE++
Subjt:  KVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKF

Arabidopsis top hits

e value

%identity

Alignment

AT4G15870.1 terpene synthase 1

2.0e-04

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Query:  TKVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKF-----QSSSIYPQKRSEICIKDYY
        T VF  FK E + F      D+  M+SLYEA  L    E+ILE    FT   LE        S  I  + R+ +C+  +Y
Subjt:  TKVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKF-----QSSSIYPQKRSEICIKDYY

Sequences

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CDS sequence

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ATGACAAAGGTTTTCCATAACTTCAAGGATGAGAGAAAAAGCTTTAGCACAAGACACTGTCAAGATTTAAATGTTATGTTATCATTGTATGAAGCTTTGTTCTTATGTAT
AGAAGGTGAAAATATTCTAGAGACAACAAAACATTTTACAATAAACTATTTGGAAAAATTTCAATCGAGTTCAATCTATCCACAAAAAAGATCTGAAATATGTATTAAGG
ACTATTATAAACCTATTTAG

mRNA sequence

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Protein sequence

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MTKVFHNFKDERKSFSTRHCQDLNVMLSLYEALFLCIEGENILETTKHFTINYLEKFQSSSIYPQKRSEICIKDYYKPI

CmoCh20G011030 (gene) of Cucurbita moschata (Rifu) v1 genome