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CmoCh20G011040 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G011040
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionterpene synthase 10-like
Genome locationCmo_Chr20:10499865..10500372
RNA-Seq ExpressionCmoCh20G011040
SyntenyCmoCh20G011040
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0006368 - transcription elongation from RNA polymerase II promoter (biological process)
GO:0016102 - diterpenoid biosynthetic process (biological process)
GO:0032784 - regulation of DNA-templated transcription, elongation (biological process)
GO:0032044 - DSIF complex (cellular component)
GO:0000287 - magnesium ion binding (molecular function)
GO:0003729 - mRNA binding (molecular function)
GO:0010333 - terpene synthase activity (molecular function)
InterPro domainsIPR001906 - Terpene synthase, N-terminal domain
IPR008930 - Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid
IPR036965 - Terpene synthase, N-terminal domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022928006.1 terpene synthase 10-like [Cucurbita moschata]1.8e-1752.94Show/hide
Query:  MMNPSTKQVYFDPNSSFIYP-----SVARI--------FGNYK----------LLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFG
        MMNPS K+V+FD NSSF+ P     SVAR+         GNYK           L    K     +R NELK EV V++NQII DP+K LELIDTLQR G
Subjt:  MMNPSTKQVYFDPNSSFIYP-----SVARI--------FGNYK----------LLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFG

Query:  IAYHFENEIKDVLKRTHQK
        I+Y FENEIKD+LKRT++K
Subjt:  IAYHFENEIKDVLKRTHQK

XP_022928103.1 terpene synthase 10-like [Cucurbita moschata]3.9e-1750Show/hide
Query:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE
        K+V FD N SF+ P             ++ R  GNYK         + LK         +R+NELK E+G++MNQII DP+KQLELIDTLQR GI+YHFE
Subjt:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE

Query:  NEIKDVLKRTHQKK
        NEIKDVLKRT++K+
Subjt:  NEIKDVLKRTHQKK

XP_022971751.1 terpene synthase 10-like [Cucurbita maxima]2.3e-1748.74Show/hide
Query:  MNPSTKQVYFDPNSSFIYP-------------SVARIFGNYK---LLYDGLK------------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGI
        +NPS K+VYFD NSS I P             ++ R  GNYK     Y+ ++            +R NELK ++GVLMNQI  DP+K+L+LIDTLQR GI
Subjt:  MNPSTKQVYFDPNSSFIYP-------------SVARIFGNYK---LLYDGLK------------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGI

Query:  AYHFENEIKDVLKRTHQKK
        +YHFENEIKDVLKR ++K+
Subjt:  AYHFENEIKDVLKRTHQKK

XP_023512338.1 terpene synthase 10-like [Cucurbita pepo subsp. pepo]6.7e-1750Show/hide
Query:  MMNPSTKQVYFDPNSSFIYP-------------SVARIFGNYK----------LLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFG
        +M PS K+VYFD NSSFI P             ++ R  GNYK           L    K     +R N+LK EVGVL+NQI  DP+K+LELIDTLQR G
Subjt:  MMNPSTKQVYFDPNSSFIYP-------------SVARIFGNYK----------LLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFG

Query:  IAYHFENEIKDVLKRTHQKK
        I+YHFENEIKDVLK  ++K+
Subjt:  IAYHFENEIKDVLKRTHQKK

XP_023512342.1 terpene synthase 10-like [Cucurbita pepo subsp. pepo]9.7e-1648.25Show/hide
Query:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE
        K+V FD N SF+ P             ++ R  GNYK         + LK         +R+NELK E+G++M+QII DP+KQLELID LQR GI+YHFE
Subjt:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE

Query:  NEIKDVLKRTHQKK
        NEIKDVLKRT++K+
Subjt:  NEIKDVLKRTHQKK

TrEMBL top hitse value%identityAlignment
A0A6J1EJ26 terpene synthase 10-like8.6e-1852.94Show/hide
Query:  MMNPSTKQVYFDPNSSFIYP-----SVARI--------FGNYK----------LLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFG
        MMNPS K+V+FD NSSF+ P     SVAR+         GNYK           L    K     +R NELK EV V++NQII DP+K LELIDTLQR G
Subjt:  MMNPSTKQVYFDPNSSFIYP-----SVARI--------FGNYK----------LLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFG

Query:  IAYHFENEIKDVLKRTHQK
        I+Y FENEIKD+LKRT++K
Subjt:  IAYHFENEIKDVLKRTHQK

A0A6J1EJW9 terpene synthase 10-like2.3e-1550.44Show/hide
Query:  KQVYFDPNSSFIYPSV-------------ARIFGNY----------KLLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE
        K+VYFD NSSFI P+V              R  GNY          + L    K     +R NELK EV V++NQII DP+K  ELIDTLQR GI+YHFE
Subjt:  KQVYFDPNSSFIYPSV-------------ARIFGNY----------KLLYDGLK-----KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE

Query:  NEIKDVLKRTHQK
        NEIKD+LKRT++K
Subjt:  NEIKDVLKRTHQK

A0A6J1EMY1 terpene synthase 10-like1.9e-1750Show/hide
Query:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE
        K+V FD N SF+ P             ++ R  GNYK         + LK         +R+NELK E+G++MNQII DP+KQLELIDTLQR GI+YHFE
Subjt:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE

Query:  NEIKDVLKRTHQKK
        NEIKDVLKRT++K+
Subjt:  NEIKDVLKRTHQKK

A0A6J1I2T8 terpene synthase 10-like2.3e-1547.79Show/hide
Query:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE
        K+V FD N SF+ P             ++ R  GNYK         + LK         + +NELK E+ ++MNQII DP+KQLELIDTLQR GI+YHFE
Subjt:  KQVYFDPNSSFIYP-------------SVARIFGNYK------LLYDGLK---------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFE

Query:  NEIKDVLKRTHQK
        NEIKD+LKRT++K
Subjt:  NEIKDVLKRTHQK

A0A6J1I436 terpene synthase 10-like1.1e-1748.74Show/hide
Query:  MNPSTKQVYFDPNSSFIYP-------------SVARIFGNYK---LLYDGLK------------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGI
        +NPS K+VYFD NSS I P             ++ R  GNYK     Y+ ++            +R NELK ++GVLMNQI  DP+K+L+LIDTLQR GI
Subjt:  MNPSTKQVYFDPNSSFIYP-------------SVARIFGNYK---LLYDGLK------------KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGI

Query:  AYHFENEIKDVLKRTHQKK
        +YHFENEIKDVLKR ++K+
Subjt:  AYHFENEIKDVLKRTHQKK

SwissProt top hitse value%identityAlignment
A0A1C9J6A7 (R)-limonene synthase 1, chloroplastic6.5e-0749.06Show/hide
Query:  KKRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTH
        K+R  ELK +V   +  +  +P+ QLELID LQR G+AYHFE EI+++L+  H
Subjt:  KKRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTH

A4FVP2 Tricyclene synthase, chloroplastic2.5e-0648.21Show/hide
Query:  KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL
        +R+  LK EV  ++N+     ++QLELIDTLQR G++YHFE EIK  L   H K +
Subjt:  KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL

B6SCF3 Probable monoterpene synthase MTS1, chloroplastic2.5e-0637.65Show/hide
Query:  SVARIFGNYKLL---YDGLK------------KRINELKVEVGVLMNQIIYD-PVKQLELIDTLQRFGIAYHFENEIKDVLKRTH
        ++ R  GNYK     YD L+            +++N+LK EV +++ + + + P+ QLE IDTL R GI+YHF++EIK +L   H
Subjt:  SVARIFGNYKLL---YDGLK------------KRINELKVEVGVLMNQIIYD-PVKQLELIDTLQRFGIAYHFENEIKDVLKRTH

B6SCF4 Myrcene synthase, chloroplastic2.5e-0654.9Show/hide
Query:  RINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTH
        R+NELK EV  +M     + + QL+LIDTLQR GI+YHFE+EI  +LKR +
Subjt:  RINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTH

Q8L5K4 Gamma-terpinene synthase, chloroplastic6.5e-0744.83Show/hide
Query:  KRINELKVEVGVLMNQ----IIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK
        +++ +LK +V  ++ Q    +  DP+ QLELID L R G++YHFE+EIK  L R H K
Subjt:  KRINELKVEVGVLMNQ----IIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK

Arabidopsis top hitse value%identityAlignment
AT2G24210.1 terpene synthase 101.4e-0440.35Show/hide
Query:  KRINE---LKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK
        KR+ E   LK +V  ++N      + QLE ID LQ+ G++YHFE EI ++L  +++K
Subjt:  KRINE---LKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK

AT3G25820.1 terpene synthase-like sequence-1,8-cineole1.4e-0444.9Show/hide
Query:  LKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK
        LK +V  +++      ++QLELID LQ+ G++YHFE EI D L   H K
Subjt:  LKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK

AT4G16730.1 terpene synthase 024.4e-0645.83Show/hide
Query:  KVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK
        K EV   +N+ I   ++QLE+ID+LQR GI+YH+++EI D+L++ H +
Subjt:  KVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQK

AT4G16740.1 terpene synthase 031.8e-0748.21Show/hide
Query:  KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL
        +R+  LK EV  ++N+     ++QLELIDTLQR G++YHFE EIK  L   H K +
Subjt:  KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL

AT4G16740.2 terpene synthase 031.8e-0748.21Show/hide
Query:  KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL
        +R+  LK EV  ++N+     ++QLELIDTLQR G++YHFE EIK  L   H K +
Subjt:  KRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGAACCCTTCCACCAAACAAGTCTATTTTGATCCCAATTCTTCATTTATCTATCCTAGCGTTGCAAGAATATTTGGAAACTACAAGTTATTGTACGATGGTCTGAA
AAAACGCATCAATGAGCTAAAGGTCGAGGTTGGTGTGCTTATGAACCAAATAATATATGATCCTGTAAAGCAACTCGAGCTCATTGATACTTTACAGCGATTTGGAATTG
CATACCATTTTGAGAATGAGATTAAAGATGTGTTAAAAAGAACGCATCAAAAAAAGCTATGA
mRNA sequenceShow/hide mRNA sequence
ATGATGAACCCTTCCACCAAACAAGTCTATTTTGATCCCAATTCTTCATTTATCTATCCTAGCGTTGCAAGAATATTTGGAAACTACAAGTTATTGTACGATGGTCTGAA
AAAACGCATCAATGAGCTAAAGGTCGAGGTTGGTGTGCTTATGAACCAAATAATATATGATCCTGTAAAGCAACTCGAGCTCATTGATACTTTACAGCGATTTGGAATTG
CATACCATTTTGAGAATGAGATTAAAGATGTGTTAAAAAGAACGCATCAAAAAAAGCTATGA
Protein sequenceShow/hide protein sequence
MMNPSTKQVYFDPNSSFIYPSVARIFGNYKLLYDGLKKRINELKVEVGVLMNQIIYDPVKQLELIDTLQRFGIAYHFENEIKDVLKRTHQKKL