| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0063435.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa] | 2.2e-86 | 35.05 | Show/hide |
Query: MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENK
+VT ES+ESWLID+G TNH+T+DKE F++L+ T +V IGNG+++ VKGKGT+AI S +GTK I DVLFVP I+QNLLSVGQL++KG+KV FEN+
Subjt: MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENK
Query: QCLIKDASGKDLFNVKMEGKSFALNP-----TAFILRVSATEIWHKKLTLSSSRGNKPYVVKIEGRGTILFVSKGGEHCKLTDF------YFIPQARRTT
CLIKDA+ +D+F VKM+GKSF+LNP + F L+ T++WHK++ +G + E +S+ CK F F + R T
Subjt: QCLIKDASGKDLFNVKMEGKSFALNP-----TAFILRVSATEIWHKKLTLSSSRGNKPYVVKIEGRGTILFVSKGGEHCKLTDF------YFIPQARRTT
Query: NRLYILELEIDQP---------------------------VSLSAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPR-TADSTLDADHDT
+L ++ ++ P + ++ V W++ AR N ++ P V R + T H+
Subjt: NRLYILELEIDQP---------------------------VSLSAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPR-TADSTLDADHDT
Query: DLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEK-------------------NPCWRKAMQEEMTSITENQTWSLEDM-PPGHRAIGLKWVF-----
L ++ L + L+E T EA + P K + E++ W+ +D G +K+ F
Subjt: DLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEK-------------------NPCWRKAMQEEMTSITENQTWSLEDM-PPGHRAIGLKWVF-----
Query: KLKRNEKGEVVKHKA----RLVAKGYVQ--------------KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARL
+ + + + E+V + RL++ Y + K+ + AM+EE++ I +N+TW L D P + IG+KWVF+ K N G + KHKARL
Subjt: KLKRNEKGEVVKHKA----RLVAKGYVQ--------------KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARL
Query: VAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTL
V KGY Q GVD+ + FAP AR++++R L AIAA W+++ +DVKSAFLNG L+E +YV QP G NKV L KAL GL+QAPRAW +K+D L
Subjt: VAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTL
Query: LSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGD
LSL F + +E +Y +G LIV +YVD+L++TG +
Subjt: LSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGD
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| RVW46097.1 Retrovirus-related Pol polyprotein from transposon RE1 [Vitis vinifera] | 5.4e-85 | 34.58 | Show/hide |
Query: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
T ++ +SESWL+D+G TNH+TYD+ F E+ T +V IGNGE++ VKGKGTVAI S G K I DVLFVP IDQNLLSVGQL++KG+KV FE+K C
Subjt: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
Query: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK-IEGRGTILFVSKGGEHCKLTDFYFIPQARRTTNRLYILE
+IKDA G+++FN+KM+GKSFALN A + T +WHK+L +K ++K +EGR KG + + L
Subjt: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK-IEGRGTILFVSKGGEHCKLTDFYFIPQARRTTNRLYILE
Query: LEIDQPVSLSAKTEEVSWRWHARYGHLN---------------FPALEETSPPPAGAP-------PEP---------------VEFATPRTADSTLDADH
+ D+ ++ +A+ E + WH R GH + P LEE P A P P + + P+ S + +
Subjt: LEIDQPVSLSAKTEEVSWRWHARYGHLN---------------FPALEETSPPPAGAP-------PEP---------------VEFATPRTADSTLDADH
Query: ----------------------------------DTDLEARYRMMDDLVGGGEPPGL-----AARELEEVTFAEAEKNPCWR--KAMQEEMTSITENQTW
+ E R ++ D + PG+ + + + + K R K ++ E S E
Subjt: ----------------------------------DTDLEARYRMMDDLVGGGEPPGL-----AARELEEVTFAEAEKNPCWR--KAMQEEMTSITENQTW
Query: SLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKAR
+++ G + +F + + + A L G+V+ + + AMQEE+ I +N TW L D P + IG+KWV++ K N G + KHKAR
Subjt: SLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKAR
Query: LVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDST
LV KGY Q GVDF E FAP ARL+++R LLA+AA W+++ +D+KSAFLNG L+E ++V QP GF KV L KAL GL+QAPRAW ++D+
Subjt: LVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDST
Query: LLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVG
LL+L F + SE +Y + LIV +YVD+L++TG + G
Subjt: LLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVG
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| RVX08961.1 Retrovirus-related Pol polyprotein from transposon RE2 [Vitis vinifera] | 5.4e-85 | 36.24 | Show/hide |
Query: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
T ++ +SESWL+D+G TNH+TYD++ F E+ T +VRIGNGE++ VKGKGTVAI S G K I DVLFVP IDQNLLSVGQ ++KG+KV FE+K C
Subjt: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
Query: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK----IEGRGTI---LFVSKGGEHCKLTDFYFIPQ--ARRT
+IKDA G+++FN+KM+GKSFALN A + T +WHK+ L N +K +EG + L + ++ K T F PQ A ++
Subjt: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK----IEGRGTI---LFVSKGGEHCKLTDFYFIPQ--ARRT
Query: TNRLYILELEIDQP------------VSLSAKTEEVSWRWHARYG------HLNFPALEETSPP---PAGAPPEPVEFATPRTADSTLDADHDTDLEARY
T +L ++ ++ P ++ W + Y L + A+ E E+ + + DA D L A Y
Subjt: TNRLYILELEIDQP------------VSLSAKTEEVSWRWHARYG------HLNFPALEETSPP---PAGAPPEPVEFATPRTADSTLDADHDTDLEARY
Query: R------MMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGH--------RAIGLKWVFKLKRNEKGEVVKHKARL
+ D + PG+ + A P K + E + WS ++ + G + +F + + + A L
Subjt: R------MMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGH--------RAIGLKWVFKLKRNEKGEVVKHKARL
Query: VAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAA
G+V+ + + MQEE+ I +N TW L D P + IG+KWV++ K N G + KHKARLV KGY Q GVDF E FAP ARL+++R LLA+AA
Subjt: VAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAA
Query: HHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLI
W+++ +DVKSAFLNG L+E ++V QP GF KV L KAL GL+QAPRAW +++D+ LL+L F + SE +Y + LIV +YVD+L+
Subjt: HHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLI
Query: ITGGDVG
+TG + G
Subjt: ITGGDVG
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| XP_003613757.4 uncharacterized protein LOC11413243 [Medicago truncatula] | 4.5e-84 | 34.2 | Show/hide |
Query: MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENK
+ T S +SS+SWLID+G TNH+TYDKE F+ELR ++ +VRIGNG+++ VKGKGT+AI S GTK I DVL+VP+IDQNLLSVGQLL+KG+KV FE+K
Subjt: MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENK
Query: QCLIKDASGKDLFNVKMEGKSFALNP-----TAFILRVSATEIWHKKLTLSSSRG-----NKPYVVKIEGRGTILFVSKGGEHCKLTDFYFIPQARRTTN
CLIKDASG+++F VKM GKSF LNP +AF ++ S TE+WHK+L +G +K V + L + ++ K F A R T
Subjt: QCLIKDASGKDLFNVKMEGKSFALNP-----TAFILRVSATEIWHKKLTLSSSRG-----NKPYVVKIEGRGTILFVSKGGEHCKLTDFYFIPQARRTTN
Query: RLYILELEIDQPVSLSAKTEEV------------SWRWHARYG------HLNFPALEE------------------------------------TSP--P
+L ++ ++ P S+ + W + ++ L F L E T+P P
Subjt: RLYILELEIDQPVSLSAKTEEV------------SWRWHARYG------HLNFPALEE------------------------------------TSP--P
Query: PAGAPPE-------------------PVEFATPRTADS--------TLDADHDTDLEARYRMMDDL-------------VGGGEPPGLAARELEEVTFAE
E P +F S T + T EA Y L V + L + ++ +
Subjt: PAGAPPE-------------------PVEFATPRTADS--------TLDADHDTDLEARYRMMDDL-------------VGGGEPPGLAARELEEVTFAE
Query: AEKNPCWRKAMQEEMTSI--------TENQTWSLEDMPPGHRAIG-LKWVFKLKRNE--KGEVVK----HKARLVAKGYVQ-----KQGVDFEE------
+ + + K Q E +I EN+ W + + ++A +K V + E K E+V RL++ Y + + DF E
Subjt: AEKNPCWRKAMQEEMTSI--------TENQTWSLEDMPPGHRAIG-LKWVFKLKRNE--KGEVVK----HKARLVAKGYVQ-----KQGVDFEE------
Query: ---AMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKS
AM+EE+ I +N TW L D P + IG+KWVF+ K N G + KHKARLV KGY Q GVD+ + FAP ARL+++R LLA+A W+V+ +DVKS
Subjt: ---AMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKS
Query: AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
FLNG L+E +YV QP GF+ +KV L KAL GL+QAPRAW +++D+ LLSL F + SE +Y L++ +YVD+L +TG + ++
Subjt: AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
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| XP_023521510.1 uncharacterized protein LOC111785335 [Cucurbita pepo subsp. pepo] | 5.7e-87 | 52.34 | Show/hide |
Query: ETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRMMDDLVGGGEPPGLAARELEEV------------TFAEAEKNPCWRKAMQEEMTSITEN--
E SP A P+PVEFATPRTADSTLD DHD DL ARYR MDDLVGGGEPPGLA RELEEV TFA+AE+NPC K ++ S N
Subjt: ETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRMMDDLVGGGEPPGLAARELEEV------------TFAEAEKNPCWRKAMQEEMTSITEN--
Query: --QTWSLEDMP-------PGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEAMQEEMTSITEN------QTWSLEDM-----PPGHRAI
+T ++ P PG + + +G +H+ V + V+F + T ++ + ++D+ PPG
Subjt: --QTWSLEDMP-------PGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEAMQEEMTSITEN------QTWSLEDM-----PPGHRAI
Query: GLKWVFKL------------------KRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVY
L+ V +L R EKGEVVKHKA LVAKGY+ KQGVDFEEVFA RLE VR LL IA H SWEVHHMDVKS FLNGELKET+
Subjt: GLKWVFKL------------------KRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVY
Query: VRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
V+QPPGFLDNDNP+KVLRLHKAL GL+QAPRAWNAKLDS LLS+ FK CASEH MYT+ H ++RLI+GVYVD+LIITGGD+ VL
Subjt: VRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A438CDR2 Retrovirus-related Pol polyprotein from transposon RE1 | 3.8e-84 | 37.59 | Show/hide |
Query: SSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLI
++S SS+SWLID+G TNH+T D+E F+EL T +V+IGNGE + VKGKGTVAI S G K+I DVL+VP IDQNLLSVGQL++KG+KV+FE+K C+I
Subjt: SSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLI
Query: KDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRG----NKPYVVKIEGRGTILFVSK-----GGEHCKLTDFYFIPQARRTTN
KDA G+D+F VKM KSFALN AF VS E+WH++L G K +VK G L K ++ K T F A R +
Subjt: KDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRG----NKPYVVKIEGRGTILFVSK-----GGEHCKLTDFYFIPQARRTTN
Query: RLYILELEIDQPVSL-SAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRMMDDLVGGGEPPGLAARELEE
+L ++ ++ P S + + Y + ++ A + + +++ D E + D E G+ +
Subjt: RLYILELEIDQPVSL-SAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPRTADSTLDADHDTDLEARYRMMDDLVGGGEPPGLAARELEE
Query: VTFAE--AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVD--FEEAMQEEMTSITENQTWSL
T + +++ +KA QE++ E++ W+ E+ K++ + + V ++ D + EAM+EE+ I +N TW L
Subjt: VTFAE--AEKNPCWRKAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVD--FEEAMQEEMTSITENQTWSL
Query: EDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFL
D P + IG+KWV++ K N G V K+KARLV KGY Q GVDF E FAP ARL+++R LLA+ A W+ + +DVKSAFLNG L+E +YV QP GF
Subjt: EDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFL
Query: DNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGD
KV L KAL GL+QAPRAW +++D L SL F + SE +Y G ++V VYVD+L++TG +
Subjt: DNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGD
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| A0A438DQ73 Retrovirus-related Pol polyprotein from transposon RE1 | 4.9e-84 | 35.56 | Show/hide |
Query: SSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLI
++S SS+SWLID+G TNH+T D+E F+EL T +V+IGNGE + VKGKGTVAI S G K+I DVL+VP IDQNLLSVGQL++KG+KV+FE+K C+I
Subjt: SSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQCLI
Query: KDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRG----NKPYVVKIEGRGTILFVSK-----GGEHCKLTDFYFIPQARRTTN
KDA G+D+F VKM K FALN AF VS E+WH++L G K +VK G L K ++ K T F A R +
Subjt: KDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRG----NKPYVVKIEGRGTILFVSK-----GGEHCKLTDFYFIPQARRTTN
Query: RLYILELEIDQPVS-------------------------LSAKTE--EVSWRWHARYGHLNFPALEETSPPPAGAPPEPV------------EFATPRTA
+L ++ ++ P L +K+E V W++ A + + +++ + + TP T
Subjt: RLYILELEIDQPVS-------------------------LSAKTE--EVSWRWHARYGHLNFPALEETSPPPAGAPPEPV------------EFATPRTA
Query: DST------LDADHDTDLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMP-PGHRAIGLKWVFKLKRNEKG
LD + + Y +P +V F E ++ W ++++ ++ + + ++D+P G R++ + E+
Subjt: DST------LDADHDTDLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMP-PGHRAIGLKWVFKLKRNEKG
Query: EVVKHKARLVAKGYVQKQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESV
V + A+ ++ + EAM+EE+ I +N TW L D P + IG+KWV++ K N G V K+KARLV KGY Q GVDF E FAP ARL+++
Subjt: EVVKHKARLVAKGYVQKQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESV
Query: RFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIV
R LLA+ A W+ + +DVKSAFLNG L++ +YV QP GF KV L KAL GL+QAPRAW +++D L SL F + SE +Y G ++V
Subjt: RFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIV
Query: GVYVDNLIITGGD
VYVD+L++TG +
Subjt: GVYVDNLIITGGD
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| A0A438EE23 Retrovirus-related Pol polyprotein from transposon RE1 | 2.6e-85 | 34.58 | Show/hide |
Query: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
T ++ +SESWL+D+G TNH+TYD+ F E+ T +V IGNGE++ VKGKGTVAI S G K I DVLFVP IDQNLLSVGQL++KG+KV FE+K C
Subjt: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
Query: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK-IEGRGTILFVSKGGEHCKLTDFYFIPQARRTTNRLYILE
+IKDA G+++FN+KM+GKSFALN A + T +WHK+L +K ++K +EGR KG + + L
Subjt: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK-IEGRGTILFVSKGGEHCKLTDFYFIPQARRTTNRLYILE
Query: LEIDQPVSLSAKTEEVSWRWHARYGHLN---------------FPALEETSPPPAGAP-------PEP---------------VEFATPRTADSTLDADH
+ D+ ++ +A+ E + WH R GH + P LEE P A P P + + P+ S + +
Subjt: LEIDQPVSLSAKTEEVSWRWHARYGHLN---------------FPALEETSPPPAGAP-------PEP---------------VEFATPRTADSTLDADH
Query: ----------------------------------DTDLEARYRMMDDLVGGGEPPGL-----AARELEEVTFAEAEKNPCWR--KAMQEEMTSITENQTW
+ E R ++ D + PG+ + + + + K R K ++ E S E
Subjt: ----------------------------------DTDLEARYRMMDDLVGGGEPPGL-----AARELEEVTFAEAEKNPCWR--KAMQEEMTSITENQTW
Query: SLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKAR
+++ G + +F + + + A L G+V+ + + AMQEE+ I +N TW L D P + IG+KWV++ K N G + KHKAR
Subjt: SLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKAR
Query: LVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDST
LV KGY Q GVDF E FAP ARL+++R LLA+AA W+++ +D+KSAFLNG L+E ++V QP GF KV L KAL GL+QAPRAW ++D+
Subjt: LVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDST
Query: LLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVG
LL+L F + SE +Y + LIV +YVD+L++TG + G
Subjt: LLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVG
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| A0A438JJ21 Retrovirus-related Pol polyprotein from transposon RE2 | 2.6e-85 | 36.24 | Show/hide |
Query: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
T ++ +SESWL+D+G TNH+TYD++ F E+ T +VRIGNGE++ VKGKGTVAI S G K I DVLFVP IDQNLLSVGQ ++KG+KV FE+K C
Subjt: TSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQC
Query: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK----IEGRGTI---LFVSKGGEHCKLTDFYFIPQ--ARRT
+IKDA G+++FN+KM+GKSFALN A + T +WHK+ L N +K +EG + L + ++ K T F PQ A ++
Subjt: LIKDASGKDLFNVKMEGKSFALN-----PTAFILRVSATEIWHKKLTLSSSRGNKPYVVK----IEGRGTI---LFVSKGGEHCKLTDFYFIPQ--ARRT
Query: TNRLYILELEIDQP------------VSLSAKTEEVSWRWHARYG------HLNFPALEETSPP---PAGAPPEPVEFATPRTADSTLDADHDTDLEARY
T +L ++ ++ P ++ W + Y L + A+ E E+ + + DA D L A Y
Subjt: TNRLYILELEIDQP------------VSLSAKTEEVSWRWHARYG------HLNFPALEETSPP---PAGAPPEPVEFATPRTADSTLDADHDTDLEARY
Query: R------MMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGH--------RAIGLKWVFKLKRNEKGEVVKHKARL
+ D + PG+ + A P K + E + WS ++ + G + +F + + + A L
Subjt: R------MMDDLVGGGEPPGLAARELEEVTFAEAEKNPCWRKAMQEEMTSITENQTWSLEDMPPGH--------RAIGLKWVFKLKRNEKGEVVKHKARL
Query: VAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAA
G+V+ + + MQEE+ I +N TW L D P + IG+KWV++ K N G + KHKARLV KGY Q GVDF E FAP ARL+++R LLA+AA
Subjt: VAKGYVQ-KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAA
Query: HHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLI
W+++ +DVKSAFLNG L+E ++V QP GF KV L KAL GL+QAPRAW +++D+ LL+L F + SE +Y + LIV +YVD+L+
Subjt: HHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLI
Query: ITGGDVG
+TG + G
Subjt: ITGGDVG
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| A0A5A7VC09 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 1.1e-86 | 35.05 | Show/hide |
Query: MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENK
+VT ES+ESWLID+G TNH+T+DKE F++L+ T +V IGNG+++ VKGKGT+AI S +GTK I DVLFVP I+QNLLSVGQL++KG+KV FEN+
Subjt: MVTSSSSKESSESWLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLEVKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENK
Query: QCLIKDASGKDLFNVKMEGKSFALNP-----TAFILRVSATEIWHKKLTLSSSRGNKPYVVKIEGRGTILFVSKGGEHCKLTDF------YFIPQARRTT
CLIKDA+ +D+F VKM+GKSF+LNP + F L+ T++WHK++ +G + E +S+ CK F F + R T
Subjt: QCLIKDASGKDLFNVKMEGKSFALNP-----TAFILRVSATEIWHKKLTLSSSRGNKPYVVKIEGRGTILFVSKGGEHCKLTDF------YFIPQARRTT
Query: NRLYILELEIDQP---------------------------VSLSAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPR-TADSTLDADHDT
+L ++ ++ P + ++ V W++ AR N ++ P V R + T H+
Subjt: NRLYILELEIDQP---------------------------VSLSAKTEEVSWRWHARYGHLNFPALEETSPPPAGAPPEPVEFATPR-TADSTLDADHDT
Query: DLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEK-------------------NPCWRKAMQEEMTSITENQTWSLEDM-PPGHRAIGLKWVF-----
L ++ L + L+E T EA + P K + E++ W+ +D G +K+ F
Subjt: DLEARYRMMDDLVGGGEPPGLAARELEEVTFAEAEK-------------------NPCWRKAMQEEMTSITENQTWSLEDM-PPGHRAIGLKWVF-----
Query: KLKRNEKGEVVKHKA----RLVAKGYVQ--------------KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARL
+ + + + E+V + RL++ Y + K+ + AM+EE++ I +N+TW L D P + IG+KWVF+ K N G + KHKARL
Subjt: KLKRNEKGEVVKHKA----RLVAKGYVQ--------------KQGVDFEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARL
Query: VAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTL
V KGY Q GVD+ + FAP AR++++R L AIAA W+++ +DVKSAFLNG L+E +YV QP G NKV L KAL GL+QAPRAW +K+D L
Subjt: VAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTL
Query: LSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGD
LSL F + +E +Y +G LIV +YVD+L++TG +
Subjt: LSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGD
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P04146 Copia protein | 8.2e-36 | 38.97 | Show/hide |
Query: FEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKS
+EEA+ E+ + N TW++ P + +WVF +K NE G +++KARLVA+G+ QK +D+EE FAP AR+ S RF+L++ ++ +VH MDVK+
Subjt: FEEAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKS
Query: AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHG--KKRLIVGVYVDNLIITGGDV
AFLNG LKE +Y+R P G + N + V +L+KA+ GL+QA R W + L F + + +Y G + + V +YVD+++I GD+
Subjt: AFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHG--KKRLIVGVYVDNLIITGGDV
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| P10978 Retrovirus-related Pol polyprotein from transposon TNT 1-94 | 7.1e-40 | 42.05 | Show/hide |
Query: EAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAF
+AMQEEM S+ +N T+ L ++P G R + KWVFKLK++ ++V++KARLV KG+ QK+G+DF+E+F+P ++ S+R +L++AA EV +DVK+AF
Subjt: EAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAF
Query: LNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKR-LIVGVYVDNLIITGGDVGVL
L+G+L+E +Y+ QP GF + V +L+K+L GL+QAPR W K DS + S + + S+ +Y + +I+ +YVD+++I G D G++
Subjt: LNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKR-LIVGVYVDNLIITGGDVGVL
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| P25600 Putative transposon Ty5-1 protein YCL074W | 9.4e-16 | 40.86 | Show/hide |
Query: MDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLII
MDV +AFLN + E +YV+QPPGF++ NP+ V L+ + GL+QAP WN +++TL + F R EH +Y + + VYVD+L++
Subjt: MDVKSAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLII
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| Q94HW2 Retrovirus-related Pol polyprotein from transposon RE1 | 1.5e-42 | 42.64 | Show/hide |
Query: FEEAMQEEMTSITENQTWSLEDMPPGH-RAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVK
+ AM E+ + N TW L PP H +G +W+F K N G + ++KARLVAKGY Q+ G+D+ E F+P + S+R +L +A SW + +DV
Subjt: FEEAMQEEMTSITENQTWSLEDMPPGH-RAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVK
Query: SAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
+AFL G L + VY+ QPPGF+D D PN V +L KAL GL+QAPRAW +L + LL++ F S+ ++ GK + + VYVD+++ITG D +L
Subjt: SAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
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| Q9ZT94 Retrovirus-related Pol polyprotein from transposon RE2 | 1.4e-40 | 41.12 | Show/hide |
Query: FEEAMQEEMTSITENQTWSL-EDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVK
+ +AM E+ + N TW L PP +G +W+F K N G + ++KARLVAKGY Q+ G+D+ E F+P + S+R +L +A SW + +DV
Subjt: FEEAMQEEMTSITENQTWSL-EDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVK
Query: SAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
+AFL G L + VY+ QPPGF+D D P+ V RL KA+ GL+QAPRAW +L + LL++ F S+ ++ G+ + + VYVD+++ITG D +L
Subjt: SAFLNGELKETVYVRQPPGFLDNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLIITGGDVGVL
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT3G20980.1 Gag-Pol-related retrotransposon family protein | 3.3e-08 | 33.9 | Show/hide |
Query: WLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLE-----VKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQ-CLIKDA
WLI + +NH+T + F L + +V+ +G+ E V+G G V + EG K I +VL+VP I+ N LSV QL G++V E + C + D
Subjt: WLIDNGYTNHITYDKESFEELRDTEDKRVRIGNGEHLE-----VKGKGTVAITSYEGTKFIPDVLFVPKIDQNLLSVGQLLDKGYKVLFENKQ-CLIKDA
Query: SGKDLFNVKM-EGKSFAL
+ +F M E + F L
Subjt: SGKDLFNVKM-EGKSFAL
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| AT4G23160.1 cysteine-rich RLK (RECEPTOR-like protein kinase) 8 | 2.8e-39 | 41.27 | Show/hide |
Query: AMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFL
AM +E+ ++ TW + +PP + IG KWV+K+K N G + ++KARLVAKGY Q++G+DF E F+P +L SV+ +LAI+A +++ +H +D+ +AFL
Subjt: AMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIAAHHSWEVHHMDVKSAFL
Query: NGELKETVYVRQPPGFL----DNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLII
NG+L E +Y++ PPG+ D+ PN V L K++ GL+QA R W K TL+ F + S+H + L V VYVD++II
Subjt: NGELKETVYVRQPPGFL----DNDNPNKVLRLHKALCGLQQAPRAWNAKLDSTLLSLNFKRCASEHDMYTYGHGKKRLIVGVYVDNLII
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| ATMG00820.1 Reverse transcriptase (RNA-dependent DNA polymerase) | 6.9e-14 | 41.67 | Show/hide |
Query: EAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIA
+AMQEE+ +++ N+TW L P +G KWVFK K + G + + KARLVAKG+ Q++G+ F E ++P R ++R +L +A
Subjt: EAMQEEMTSITENQTWSLEDMPPGHRAIGLKWVFKLKRNEKGEVVKHKARLVAKGYVQKQGVDFEEVFAPAARLESVRFLLAIA
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