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CmoCh20G011290 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G011290
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionUnknown protein
Genome locationCmo_Chr20:10922634..10923277
RNA-Seq ExpressionCmoCh20G011290
SyntenyCmoCh20G011290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
BAT10752.1 Os10g0403200, partial [Oryza sativa Japonica Group]1.3e-0537.65Show/hide
Query:  HVILVELFIAVERQQNVDEIGIIRRS----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN
        HV+L E+ + +E +++VDE+GI+          AV+ + AAD+ ++  DE GAA  D   VVE  +P E++ P++R E+LEP  +
Subjt:  HVILVELFIAVERQQNVDEIGIIRRS----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN

CAB3457671.1 unnamed protein product [Digitaria exilis]6.6e-1333Show/hide
Query:  MAVVFSGISMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLP-PIAVAISLATSPCISGCKINSATTHSVSSAVV----------
        MAVV +G+  P   WTSD  RRAH+SSGPGG S + S  TAC+Y   A + S    P P   + S  T  C SGC    A+THS+++A V          
Subjt:  MAVVFSGISMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLP-PIAVAISLATSPCISGCKINSATTHSVSSAVV----------

Query:  ------------HHVILVELFIAVERQQNVDEI--------GIIRRSFTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPF
                     HV + E  +A E +++V E+          +      AVL++  AD+ I+  DE+ AA     + VE+ +PGE++ P++ ++Q+  F
Subjt:  ------------HHVILVELFIAVERQQNVDEI--------GIIRRSFTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPF

Query:  TNQ
         ++
Subjt:  TNQ

KAB8092580.1 hypothetical protein EE612_018804, partial [Oryza sativa]3.9e-0545.68Show/hide
Query:  SMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVV
        S P  RW S   RRAH+SSGPGGC R  S TT C+YG  A S         A +IS       SGC    A+THS   A V
Subjt:  SMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVV

KAB8112670.1 hypothetical protein EE612_051290, partial [Oryza sativa]1.7e-0537.21Show/hide
Query:  HVILVELFIAVERQQNVDEIGIIRRS-----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN
        HV+L E+ + +E +++VDE+GI+           AV+ + AAD+ ++  DE GAA  D   VVE  +P E++ P++R E+LEP  +
Subjt:  HVILVELFIAVERQQNVDEIGIIRRS-----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN

KAF7840019.1 hypothetical protein G2W53_008501 [Senna tora]6.8e-1041.86Show/hide
Query:  HHVILVELFIAVERQQNVDEIGIIRR--SFTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTNQL
        +H++ ++L   +ER+QN+DEI +IR    F  +V +N   ++F + RDE  AA+  T RV+  T+PG+II P+KRT++LE F+N +
Subjt:  HHVILVELFIAVERQQNVDEIGIIRR--SFTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTNQL

TrEMBL top hitse value%identityAlignment
A0A0E0EXJ1 Uncharacterized protein6.6e-1132.39Show/hide
Query:  MAVVFSGISMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVVHHVILVELFIA
        +AVV +G +MPL   TS    RA  SSGPGGC+ SVSFTTAC+                                     T ++SS+V+         + 
Subjt:  MAVVFSGISMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVVHHVILVELFIA

Query:  VERQQNVDEIGIIRRS-----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN
        +E +++VDE+GI+           AV+ +  AD+ ++  DE GAA  D   VVE  +P E++ P++R E+LEP  +
Subjt:  VERQQNVDEIGIIRRS-----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN

A0A0P0W003 Os03g0603200 protein (Fragment)1.9e-0545.68Show/hide
Query:  SMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVV
        S P  RW S   RRAH+SSGPGGC R  S TT C+YG  A S         A +IS       SGC    A+THS   A V
Subjt:  SMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVV

A0A0P0XUW8 Os10g0403200 protein (Fragment)6.4e-0637.65Show/hide
Query:  HVILVELFIAVERQQNVDEIGIIRRS----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN
        HV+L E+ + +E +++VDE+GI+          AV+ + AAD+ ++  DE GAA  D   VVE  +P E++ P++R E+LEP  +
Subjt:  HVILVELFIAVERQQNVDEIGIIRRS----FTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTTGTGTTCTCTGGGATAAGCATGCCGTTGCTGAGGTGGACATCCGACGAAGAGAGGCGGGCCCACGAGAGTAGTGGACCTGGTGGGTGTAGCCGCAGTGTCTC
CTTCACCACCGCCTGTAAGTACGGCAGATTCGCCACGTCAGCGTCTGAGAGGCTCCTTCCGCCTATAGCGGTGGCGATTTCCCTCGCGACTTCTCCCTGTATCTCCGGAT
GTAAAATTAACTCCGCCACCACCCACTCCGTCAGCAGCGCCGTCGTCCACCATGTCATCCTCGTTGAGCTTTTCATCGCCGTCGAGAGACAGCAAAACGTCGACGAAATC
GGAATCATCCGACGGAGCTTCACCGCGGCGGTGCTCATCAATTACGCCGCGGACAAATTCATTAACTTTAGGGACGAGTCGGGCGCAGCGGTGGCGGATACGACCCGGGT
CGTAGAATCCACTAAGCCAGGGGAGATAATCCGACCAATTAAACGCACCGAGCAGCTCGAACCCTTCACGAACCAACTCGCGAACCGTTTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGGTTGTGTTCTCTGGGATAAGCATGCCGTTGCTGAGGTGGACATCCGACGAAGAGAGGCGGGCCCACGAGAGTAGTGGACCTGGTGGGTGTAGCCGCAGTGTCTC
CTTCACCACCGCCTGTAAGTACGGCAGATTCGCCACGTCAGCGTCTGAGAGGCTCCTTCCGCCTATAGCGGTGGCGATTTCCCTCGCGACTTCTCCCTGTATCTCCGGAT
GTAAAATTAACTCCGCCACCACCCACTCCGTCAGCAGCGCCGTCGTCCACCATGTCATCCTCGTTGAGCTTTTCATCGCCGTCGAGAGACAGCAAAACGTCGACGAAATC
GGAATCATCCGACGGAGCTTCACCGCGGCGGTGCTCATCAATTACGCCGCGGACAAATTCATTAACTTTAGGGACGAGTCGGGCGCAGCGGTGGCGGATACGACCCGGGT
CGTAGAATCCACTAAGCCAGGGGAGATAATCCGACCAATTAAACGCACCGAGCAGCTCGAACCCTTCACGAACCAACTCGCGAACCGTTTCTAA
Protein sequenceShow/hide protein sequence
MAVVFSGISMPLLRWTSDEERRAHESSGPGGCSRSVSFTTACKYGRFATSASERLLPPIAVAISLATSPCISGCKINSATTHSVSSAVVHHVILVELFIAVERQQNVDEI
GIIRRSFTAAVLINYAADKFINFRDESGAAVADTTRVVESTKPGEIIRPIKRTEQLEPFTNQLANRF