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CmoCh20G011340 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G011340
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionRoot meristem growth factor 9-like protein
Genome locationCmo_Chr20:10967661..10969039
RNA-Seq ExpressionCmoCh20G011340
SyntenyCmoCh20G011340
Gene Ontology termsGO:0008083 - growth factor activity (molecular function)
InterPro domainsIPR039337 - Protein GOLVEN 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045905.1 Root meristem growth factor 9 -like protein [Cucumis melo var. makuwa]3.5e-1155.95Show/hide
Query:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKD----DHKLKGNDDL-AVH----EEEHFSSTDDLGAMDYTPASKKPPIHN
        KR+L+L +L+ +LL  FSN  IA+RS+GV ++K +    +  +  NDD+  VH    EE +FSSTDDLGAMDYTPASKKPPIHN
Subjt:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKD----DHKLKGNDDL-AVH----EEEHFSSTDDLGAMDYTPASKKPPIHN

KAG6571377.1 hypothetical protein SDJN03_30292, partial [Cucurbita argyrosperma subsp. sororia]5.3e-3196.15Show/hide
Query:  MAMNKRVLVLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHEEEHFSSTDDLGAMDYTPASKKPPIHN
        MAMNKRVLVLVL  VLLCSFSNKVIA+RSLGVPQIKKDDHKLKGNDDLAVHEEEHFSSTDDLGAMDYTPASKKPPIHN
Subjt:  MAMNKRVLVLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHEEEHFSSTDDLGAMDYTPASKKPPIHN

KAG6605281.1 hypothetical protein SDJN03_02598, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1467.9Show/hide
Query:  MAMNKR-VLVLVLVFVLLCSFSNKVIASRSL--GVPQIKKDDHKLKGNDDLAVHEEEHFSSTDDLGAMDYTPASKKPPIHN
        MA  KR VLVL+++ VLL  FSN  I +RSL  GVPQIKKDDH LK + DL V +EEHF ST DL AMDYT ASKKPPIHN
Subjt:  MAMNKR-VLVLVLVFVLLCSFSNKVIASRSL--GVPQIKKDDHKLKGNDDLAVHEEEHFSSTDDLGAMDYTPASKKPPIHN

KGN62102.1 hypothetical protein Csa_006036 [Cucumis sativus]8.4e-1359.76Show/hide
Query:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLK----GNDDLAVH---EEEHFSSTDDLGAMDYTPASKKPPIHN
        KR+L L VL+ VLLC FSN  IA+RS+GV ++K +    K     +D   VH   EE +FSSTDDLGAMDYTPASKKPPIHN
Subjt:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLK----GNDDLAVH---EEEHFSSTDDLGAMDYTPASKKPPIHN

TXG60474.1 hypothetical protein EZV62_015047 [Acer yangbiense]4.2e-0443.04Show/hide
Query:  VLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHE-----EEH----FSSTDDLGAMDYTPASKKPPIHN
        +L++ F+LLC F +    +RSLGV  +  DD K+KG D L  H+     EE      +  +DL ++DYTPA +KPPIHN
Subjt:  VLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHE-----EEH----FSSTDDLGAMDYTPASKKPPIHN

TrEMBL top hitse value%identityAlignment
A0A0A0LMV6 Uncharacterized protein4.1e-1359.76Show/hide
Query:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLK----GNDDLAVH---EEEHFSSTDDLGAMDYTPASKKPPIHN
        KR+L L VL+ VLLC FSN  IA+RS+GV ++K +    K     +D   VH   EE +FSSTDDLGAMDYTPASKKPPIHN
Subjt:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLK----GNDDLAVH---EEEHFSSTDDLGAMDYTPASKKPPIHN

A0A5A7TWX6 Root meristem growth factor 9-like protein1.7e-1155.95Show/hide
Query:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKD----DHKLKGNDDL-AVH----EEEHFSSTDDLGAMDYTPASKKPPIHN
        KR+L+L +L+ +LL  FSN  IA+RS+GV ++K +    +  +  NDD+  VH    EE +FSSTDDLGAMDYTPASKKPPIHN
Subjt:  KRVLVL-VLVFVLLCSFSNKVIASRSLGVPQIKKD----DHKLKGNDDL-AVH----EEEHFSSTDDLGAMDYTPASKKPPIHN

A0A5C7HUL0 Uncharacterized protein2.0e-0443.04Show/hide
Query:  VLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHE-----EEH----FSSTDDLGAMDYTPASKKPPIHN
        +L++ F+LLC F +    +RSLGV  +  DD K+KG D L  H+     EE      +  +DL ++DYTPA +KPPIHN
Subjt:  VLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHE-----EEH----FSSTDDLGAMDYTPASKKPPIHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGAACAAACGCGTCCTCGTCCTCGTTCTCGTCTTCGTTCTTCTTTGTTCTTTCTCAAACAAAGTTATTGCATCAAGAAGCTTGGGAGTGCCTCAAATTAAGAA
AGATGATCATAAGCTTAAAGGAAATGATGATCTTGCAGTTCATGAGGAAGAACATTTTTCAAGCACAGATGATTTGGGCGCAATGGATTATACTCCAGCGTCCAAGAAGC
CTCCAATCCACAATTGA
mRNA sequenceShow/hide mRNA sequence
TATAAAGTAACTTCTCAACTTCAACACCTTCTTCACACAAAAACAAAGCTTCCCTTTTGCCATTACAAGAACAAAATCAAAGCCAAACCACAAAAGCTCCAATGGCTATG
AACAAACGCGTCCTCGTCCTCGTTCTCGTCTTCGTTCTTCTTTGTTCTTTCTCAAACAAAGTTATTGCATCAAGAAGCTTGGGAGTGCCTCAAATTAAGAAAGATGATCA
TAAGCTTAAAGGAAATGATGATCTTGCAGTTCATGAGGAAGAACATTTTTCAAGCACAGATGATTTGGGCGCAATGGATTATACTCCAGCGTCCAAGAAGCCTCCAATCC
ACAATTGAGAGTTTATTTCATTAGTAATTTGTATGATATTTTTACATCTGCCTTTCTCCTTTTTATATTTTTTGGTTAAAGTGAAGCTTCTAGTAATGAATTATATAGAA
ATGGAAGATATGAGCAAACCATGAAACAATGGGGTTTCTTAC
Protein sequenceShow/hide protein sequence
MAMNKRVLVLVLVFVLLCSFSNKVIASRSLGVPQIKKDDHKLKGNDDLAVHEEEHFSSTDDLGAMDYTPASKKPPIHN