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CmoCh20G011370 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G011370
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionWRKY domain-containing protein
Genome locationCmo_Chr20:11071328..11071594
RNA-Seq ExpressionCmoCh20G011370
SyntenyCmoCh20G011370
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0043565 - sequence-specific DNA binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571381.1 hypothetical protein SDJN03_30296, partial [Cucurbita argyrosperma subsp. sororia]3.8e-38100Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQVA
        MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQVA
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQVA

KAG7011149.1 putative WRKY transcription factor 51, partial [Cucurbita argyrosperma subsp. argyrosperma]9.8e-3498.77Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEP
        MASFP EDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEP
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEP

XP_022927982.1 probable WRKY transcription factor 51 [Cucurbita moschata]2.1e-3697.67Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ
        MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPS++
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ

XP_022971732.1 probable WRKY transcription factor 51 [Cucurbita maxima]1.0e-3596.51Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ
        MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKI GVDSGGSSVAVDSGSSFVVSSEPSPS++
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ

XP_023512174.1 probable WRKY transcription factor 51 [Cucurbita pepo subsp. pepo]2.3e-3595.35Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ
        MASFPYEDPNPNPNPNF QFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITG+DSGGSSVAVDSGSSFVVSSEPSPS++
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ

TrEMBL top hitse value%identityAlignment
A0A0A0LM41 WRKY domain-containing protein2.6e-1665.62Show/hide
Query:  MASFPYEDPNPNPNP---NFTQFSPILDPASFFDFDLSNFLV-GDDDS-YVDQLASS-----SSEKIT--GVDSGGSSVAVDSGSSFVVSSEPSPS
        MASFPYED N NPNP   N+T F PILDPASFFDF+LS+FL+ GDD++  VDQ+ASS     SSEKIT  GVDSGGSS  +D+GSS VVSS  + S
Subjt:  MASFPYEDPNPNPNP---NFTQFSPILDPASFFDFDLSNFLV-GDDDS-YVDQLASS-----SSEKIT--GVDSGGSSVAVDSGSSFVVSSEPSPS

A0A6J1DV80 probable WRKY transcription factor 511.4e-1764.13Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDD--SYVDQLASS-----SSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSM
        MASFP +DPNPNPNPN+T F PILDP+ FFDFDLS++L+ +DD  +  DQ ASS     SSEKITGVDSG S   VDSGSS V SS  + SM
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDD--SYVDQLASS-----SSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSM

A0A6J1E1D1 probable WRKY transcription factor 511.4e-1764.13Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDD--SYVDQLASS-----SSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSM
        MASFP +DPNPNPNPN+T F PILDP+ FFDFDLS++L+ +DD  +  DQ ASS     SSEKITGVDSG S   VDSGSS V SS  + SM
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDD--SYVDQLASS-----SSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSM

A0A6J1EIN3 probable WRKY transcription factor 511.0e-3697.67Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ
        MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPS++
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ

A0A6J1I2S4 probable WRKY transcription factor 515.1e-3696.51Show/hide
Query:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ
        MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKI GVDSGGSSVAVDSGSSFVVSSEPSPS++
Subjt:  MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAGCTTCCCTTATGAAGATCCAAACCCTAACCCTAACCCTAATTTCACGCAATTCTCCCCAATTCTCGACCCCGCTTCCTTCTTCGACTTCGATCTCTCCAATTT
CCTCGTCGGCGATGACGATAGCTACGTTGACCAACTCGCCTCCTCGTCTTCGGAGAAGATCACCGGCGTGGACAGTGGCGGTAGTAGTGTGGCAGTGGACAGCGGATCTA
GCTTCGTGGTTTCATCGGAGCCGTCGCCATCCATGCAAGTGGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGAGCTTCCCTTATGAAGATCCAAACCCTAACCCTAACCCTAATTTCACGCAATTCTCCCCAATTCTCGACCCCGCTTCCTTCTTCGACTTCGATCTCTCCAATTT
CCTCGTCGGCGATGACGATAGCTACGTTGACCAACTCGCCTCCTCGTCTTCGGAGAAGATCACCGGCGTGGACAGTGGCGGTAGTAGTGTGGCAGTGGACAGCGGATCTA
GCTTCGTGGTTTCATCGGAGCCGTCGCCATCCATGCAAGTGGCTTAA
Protein sequenceShow/hide protein sequence
MASFPYEDPNPNPNPNFTQFSPILDPASFFDFDLSNFLVGDDDSYVDQLASSSSEKITGVDSGGSSVAVDSGSSFVVSSEPSPSMQVA