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CmoCh20G011410 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G011410
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
DescriptionCSL zinc finger domain-containing protein
Genome locationCmo_Chr20:11166663..11169370
RNA-Seq ExpressionCmoCh20G011410
SyntenyCmoCh20G011410
Gene Ontology termsGO:0017183 - peptidyl-diphthamide biosynthetic process from peptidyl-histidine (biological process)
GO:0016020 - membrane (cellular component)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR044248 - Diphthamide biosynthesis protein 3/4-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605113.1 hypothetical protein SDJN03_02430, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2172.09Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        MWTVVTEAL+ M  +LILVAE        G DTN+VYSPCLDAKIQR DGFTFG AF SKE FF D IQFSPCDKRLAL FKV  L
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
XP_022148528.1 uncharacterized protein LOC111017155 [Momordica charantia]2.4e-1864.63Show/hide
Query:  TEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNLL
        T  +   A+MLILVAE        G DTN+V+SPCLDAK+QRSDGFTFG AF SKE FFQDQIQFSPCD+RL LA K   L+
Subjt:  TEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNLL
XP_022947436.1 uncharacterized protein LOC111451295 [Cucurbita moschata]1.1e-2172.09Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        MWTVVTEAL+ M  +LILVAE        G DTN+VYSPCLDAKIQR DGFTFG AF SKE FF D IQFSPCDKRLAL FKV  L
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
XP_023007524.1 uncharacterized protein LOC111499988 [Cucurbita maxima]4.7e-2274.42Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        MW VVTEALV  AL LILVAEG       G DTN+VYSPCLDAKIQRSDGFTFG  F SKE FFQD IQFSPCDKR AL FKV  L
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
XP_023532589.1 uncharacterized protein LOC111794707 [Cucurbita pepo subsp. pepo]3.9e-2476.74Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        MWTVVTEALV  A+MLILV E        GMDTN+VYSPCLDAKIQRSDGFTFG AF SKE FFQD IQFSPCDKRLAL FKV  L
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
TrEMBL top hitse value%identityAlignment
A0A6J1D4C1 uncharacterized protein LOC1110171551.2e-1864.63Show/hide
Query:  TEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNLL
        T  +   A+MLILVAE        G DTN+V+SPCLDAK+QRSDGFTFG AF SKE FFQDQIQFSPCD+RL LA K   L+
Subjt:  TEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNLL
A0A6J1FVK1 uncharacterized protein LOC1114488557.6e-1863.41Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFK
        M  + T  +V +  +L+LVAE        G+DTN+VYSPCLDAKIQ+SDGFTFG AF SKE FFQDQIQFSPCD RLAL +K
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFK
A0A6J1G6F2 uncharacterized protein LOC1114512955.1e-2272.09Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        MWTVVTEAL+ M  +LILVAE        G DTN+VYSPCLDAKIQR DGFTFG AF SKE FF D IQFSPCDKRLAL FKV  L
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
A0A6J1JGG7 uncharacterized protein LOC1114842891.7e-1762.2Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFK
        M  + T  +V +  +L+LVAE        G DTN +YSPCLDAKIQ+SDGFTFG AF SKE FFQDQIQFSPCD RLAL +K
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFK
A0A6J1L563 uncharacterized protein LOC1114999882.3e-2274.42Show/hide
Query:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        MW VVTEALV  AL LILVAEG       G DTN+VYSPCLDAKIQRSDGFTFG  F SKE FFQD IQFSPCDKR AL FKV  L
Subjt:  MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G15910.1 CSL zinc finger domain-containing protein8.6e-1450.68Show/hide
Query:  LMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
        +M+I++   M  D     D N VYSPC D +I + DGFT G A  SKE FF DQ+Q SPCD RL LA K+  L
Subjt:  LMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNL
AT3G11800.1 unknown protein1.1e-0851.02Show/hide
Query:  DTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFF----QDQIQFSPCDKR
        D N VYSPC D+ +   DGFTFG AF +K+ FF       +Q+SPCD R
Subjt:  DTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFF----QDQIQFSPCDKR
AT3G44150.1 unknown protein1.5e-1344.74Show/hide
Query:  TEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQ-IQFSPCDKRLALA
        ++ L  +    +++   +G D+    +TN +YSPC D +IQRSDGFTFG AF S+  FF +Q +  SPCD+RL+LA
Subjt:  TEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQ-IQFSPCDKRLALA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGACCGTAGTAACAGAGGCTTTGGTTACGATGGCGCTGATGCTGATTTTGGTTGCCGAAGGGATGGGCGCTGATGCTGATTTTGGGATGGATACGAACAATGTATA
CAGTCCTTGTTTGGATGCGAAGATTCAGAGATCAGATGGATTTACTTTTGGTGCAGCATTTTGGTCGAAGGAACCATTCTTTCAGGATCAGATTCAGTTTTCGCCTTGCG
ATAAGCGTTTGGCTTTGGCATTCAAAGTCCTCAACTTGCTGTGTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCCATAGCACAGCCTTCAATCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGTGGACCGTAGTAACAGAGGCTTTGGTTACGATGGCGCTGATGCTGATTTTGGTTGCCGAAGGGATGGGCGCTGATGCTGATTTTGGGATGGATACGAACAATGTATA
CAGTCCTTGTTTGGATGCGAAGATTCAGAGATCAGATGGATTTACTTTTGGTGCAGCATTTTGGTCGAAGGAACCATTCTTTCAGGATCAGATTCAGTTTTCGCCTTGCG
ATAAGCGTTTGGCTTTGGCATTCAAAGTCCTCAACTTGCTGTGTTCAGGCCTAAAGTCGACCAGCTCACTTTCCTCACCATCCATAGCACAGCCTTCAATCCGCTGAGTT
GTTTGTAAATGGAGAGATCGTTCAAAGGTCGCCAGAAAGACAAAGAAGGGTGGAGCCACAATCACGGTGAGTTCAAGATAGACCGAGGTATAATGATAGGACCCGCTTTG
TGAGACGCAGAGAAAACATGAGGCGATGCATGCCATTTGATAAGTTGAGAAGATGTGCAAGTGACTAGAGGGGAAGGGAATCTGGAATCAATGAAGAGGCAAATTGGAAA
ATTTGCTATATATAAATAATCAATCCCTCTGCTACGTAAAATAGCGTTTCATGCTCAGTAGATGGTAACTTTGGTTGTTGACCTGGAGAAACTCCTCAGTACTAGTGTAA
CACCCGCTCATCGCCAACGCGATTAACAGGAGTTACTATCGACAATATTAAGAGACTCTGATACCCAAT
Protein sequenceShow/hide protein sequence
MWTVVTEALVTMALMLILVAEGMGADADFGMDTNNVYSPCLDAKIQRSDGFTFGAAFWSKEPFFQDQIQFSPCDKRLALAFKVLNLLCSGLKSTSSLSSPSIAQPSIR