CuGenDBv2

Gene ID	CmoCh20G011570
Organism	Cucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Description	upstream activation factor subunit UAF30-like
Genome location	Cmo_Chr20:11349062..11354983
RNA-Seq Expression	CmoCh20G011570
Synteny	CmoCh20G011570
Gene Ontology terms	GO:0005634 - nucleus (cellular component)
InterPro domains	IPR003121 - SWIB/MDM2 domain IPR014876 - DEK, C-terminal IPR019835 - SWIB domain IPR036885 - SWIB/MDM2 domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_022928098.1 upstream activation factor subunit UAF30-like [Cucurbita moschata]

2.1e-150

95.5

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Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

XP_022971720.1 upstream activation factor subunit spp27-like [Cucurbita maxima]

6.7e-144

92.6

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Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND HD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
         EKGK GSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEK+Q+EKQEKEKQPKEK QKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

XP_023512445.1 upstream activation factor subunit spp27-like [Cucurbita pepo subsp. pepo]

5.3e-149

95.18

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Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

XP_038901461.1 protein TRI1-like isoform X2 [Benincasa hispida]

8.5e-131

85.4

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVD+FLQTEHER  EEG GDCEE DQE GDENLKTEE+DGDSEDGDNDD D
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLA---KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPL
        DEKGK GSNKL+   KKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIRG NLQDPSNRRNILCD+SLKALF V+SINMFQMNKALSKHIWPL
Subjt:  DEKGKTGSNKLA---KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDV
        ESNDVIPA SSQKEKQQ     KEKQPKEKPQKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE AL RSDV
Subjt:  ESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDV

Query:  VKRMWDYIKQNNLQV
        VKRMWDYIKQNNLQ+
Subjt:  VKRMWDYIKQNNLQV

XP_038901462.1 protein TRI1-like isoform X3 [Benincasa hispida]

2.9e-131

85.49

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELI RLREFLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVD+FLQTEHER  EEG GDCEE DQE GDENLKTEE+DGDSEDGDNDD D
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLA---KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPL
        DEKGK GSNKL+   KKRGGGGFSKLCSLSPQLQEFIG PEMARTEVVKQLWNHIRG NLQDPSNRRNILCD+SLKALF V+SINMFQMNKALSKHIWPL
Subjt:  DEKGKTGSNKLA---KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPL

Query:  ESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDV
        ESNDVIPA SSQKEKQQ     KEKQPKEKPQKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE AL RSDV
Subjt:  ESNDVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDV

Query:  VKRMWDYIKQNNLQVFK
        VKRMWDYIKQNNLQV K
Subjt:  VKRMWDYIKQNNLQVFK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LJW7 Uncharacterized protein

2.5e-120

81.03

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKK FIREQVDLFLQTEHE+  +EG   CEE  QEDGDENLK E EDGDSEDGDND+ D
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
        DEKGKT S K+ K+  GGGF+KLCSLSPQLQEFIG PEMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEK Q     KEKQPKEKPQKKRQKQGKEE              SDDSARE+KRQKKGKSGFLAPL LS+ALV FLGTGE AL RSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

A0A1S3C766 upstream activation factor subunit UAF30-like

8.3e-124

83.92

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE +QEDGDENLK E EDGDSEDGDNDD D
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
        DEKGKT S+K AKKR GGGFSKLCSLSPQLQEFIG  EMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEKQQ     KEKQPKEKPQKKRQKQGKEE              SDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGE AL RSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

A0A5D3CU37 Upstream activation factor subunit UAF30-like

3.7e-124

83.49

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELI RLR+FLR+SDLN TTTAIVRRKLEE FG+DLSDKKRFIREQVDLFLQTEHE+  EEG G CEE +QEDGDENLK E EDGDSEDGDNDD D
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
        DEKGKT S+K AKKR GGGFSKLCSLSPQLQEFIG  EMARTEVVKQLWNHIR NNLQDPSNRRNILCDE LKALF V+SINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEKQQ     KEKQPKEKPQKKRQKQGKEE              SDDSARE+KRQKKGKSGFLAPL LSDALV FLGTGE AL RSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQVFKS
        MWDYIKQNNLQ  KS
Subjt:  MWDYIKQNNLQVFKS

A0A6J1EMX5 upstream activation factor subunit UAF30-like

1.0e-150

95.5

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
        DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

A0A6J1I6I7 upstream activation factor subunit spp27-like

3.2e-144

92.6

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDND HD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
         EKGK GSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF VDSINMFQMNKALSKHIWPLESN
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR
        DVIPAKSSQKEK+Q+EKQEKEKQPKEK QKKRQKQGKEE              SDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGE++LSRSDVVKR
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKR

Query:  MWDYIKQNNLQ
        MWDYIKQNNLQ
Subjt:  MWDYIKQNNLQ

SwissProt top hits

e value

%identity

Alignment

O74503 Upstream activation factor subunit spp27

1.2e-07

30.14

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Query:  LREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQV-DLFLQT--EHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTG
        +++ L   D    +   VR+ LEE   VDLS  K+ +   +   F +T    E+E  E      +   +   EN  TEE    ++       D E+G  G
Subjt:  LREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQV-DLFLQT--EHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTG

Query:  SNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKS
          K  +       +K   LSP+L EF+G+ +++R + VK+LW +I+ ++LQDP+++R ILCD+ LK++F VD+++MF MNK L+  +  +  +D +P   
Subjt:  SNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKS

Query:  SQKEKQQKEKQEKEKQPKE
         + E+        +++ KE
Subjt:  SQKEKQQKEKQEKEKQPKE

Q05024 Protein TRI1

4.7e-07

31.71

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Query:  VRRKLEEYFGVDLSDKKRFIREQV-DLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGS-NKLAKKRGGGGFSKLCS
        VR+ L+  + V+L  +++ I E + + F   +          D    DQE    +L+ ++E    E+         KGK+ S +K  KK+     S   S
Subjt:  VRRKLEEYFGVDLSDKKRFIREQV-DLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGS-NKLAKKRGGGGFSKLCS

Query:  -----LSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKE-KQE
             LS  LQ+F+G  E+ RT+VVK +W +I+ ++LQ+P +RR ILCDE ++ +F    + MF MNK L+KH++    ++++  +  QK+  +KE K E
Subjt:  -----LSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKE-KQE

Query:  KEKQP
         E  P
Subjt:  KEKQP

Q08747 Upstream activation factor subunit UAF30

9.4e-08

30.49

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Query:  SELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKG
        S +ID L   L D DL   TT  VR  L+E + +D+  + + I + +   L    ER   E     E+  +E+    ++  +E   S+    ++ +D   
Subjt:  SELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKG

Query:  KTGSNKLAKKRGGGGFSKL----CSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIW-PLES
        +T    + KK+G    S +     +LS  L   +G  E+ RTEVV++LW +I+ +NLQ+P+N++ ILCDE L+ L    S NMF+M+K L+ H+  P + 
Subjt:  KTGSNKLAKKRGGGGFSKL----CSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIW-PLES

Query:  NDVIPAKSSQKEKQQKEKQEKEK
        +D  P     + K++    + E+
Subjt:  NDVIPAKSSQKEKQQKEKQEKEK

Arabidopsis top hits

e value

%identity

Alignment

AT1G49520.1 SWIB complex BAF60b domain-containing protein

8.9e-54

45.71

Show/hide

Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEH--EREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDD
        MVSDS+L+ +LRE LR SDL  TT A VRR+LE YFGV+L+DKK F+REQ+D FL+++   E + E+   DC      +GD+N        D E  +NDD
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEH--EREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDD

Query:  HDDEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLE
              KT     AKKR GGGF+K+C LSPQL++F+G  ++ARTEVVK++W +IR ++LQDP+NRRNILCDESL +LF V +INMFQMNKAL+KHIW L 
Subjt:  HDDEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLE

Query:  SND--VIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSD
          D      K    ++   E+ EK+ + +E  +   ++  +EE ++  +            A+ E++ KK   GF     LS  L  F GT +  L+R++
Subjt:  SND--VIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSD

Query:  VVKRMWDYIKQNNLQ
        VVK +W YIK+NNLQ
Subjt:  VVKRMWDYIKQNNLQ

AT2G14880.1 SWIB/MDM2 domain superfamily protein

3.8e-12

39.51

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Query:  KRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF-CVDSINMFQMNKALSKH
        KR   G  K   +SP++Q+ + +PE+ART+ +K++W +I+ ++LQDP N+R ILCDE LK +F   D +   ++ K +  H
Subjt:  KRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALF-CVDSINMFQMNKALSKH

AT2G35605.1 SWIB/MDM2 domain superfamily protein

1.5e-13

43.96

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Query:  KTGSNKLAKK-RGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFC-VDSINMFQMNKALSKH
        K  S+  AK  R G G  K+  +S  L  FIG  E++RT  VK++W +I+ NNLQ+P N+R ILCDE LK +F   D++   +++K LS+H
Subjt:  KTGSNKLAKK-RGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFC-VDSINMFQMNKALSKH

AT3G19080.1 SWIB complex BAF60b domain-containing protein

8.6e-49

44.23

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Query:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD
        MVSD +L+ RLRE L  SDLN  T A VRR+LE  FGVDL+DKK +IR+Q+D FL++    E++      EE    D    +K E E GD ED D D   
Subjt:  MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHD

Query:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN
         E+ K      AKKR GGG +K+  LSPQL++ +G  ++ RTEVVK++W +IR  +LQDP +RR I+CDE L +LF V +INMFQMNKAL+KHIWPL   
Subjt:  DEKGKTGSNKLAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESN

Query:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVE-NAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVK
        D      +   K++ E +  E   K+  Q +  ++ KEE   + E  ++        +   EK ++KG  GF     LS  L  F  TG + L+R++VVK
Subjt:  DVIPAKSSQKEKQQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVE-NAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVK

Query:  RMWDYIKQNNLQ
         +W YIK+NNLQ
Subjt:  RMWDYIKQNNLQ

AT4G22360.1 SWIB complex BAF60b domain-containing protein

4.5e-29

33.49

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Query:  KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK
        +K G GG +K+C +SP+L+  +G P + RTE+V+QLW +IR NNLQDPSN+R I+CD++L+ +F  D  +MF+MNK L+KHI PL+     P+K S + K
Subjt:  KKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK

Query:  QQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQV
        + K + E                                       + E  +    +   + + LS+ L  F GTGE+ ++  ++++R+W+YIK NNL+ 
Subjt:  QQKEKQEKEKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQV

Query:  FKSYASIHPSFMACD
              ++P  + CD
Subjt:  FKSYASIHPSFMACD

Sequences

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CDS sequence

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ATGGTTTCCGACTCGGAGCTCATCGACCGGCTCCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTGTCCGCCGGAAGCTTGAGGAGTACTTTGG
CGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAGGAAGGTGGCGGCGACTGTGAGGAAGCCG
ACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAGGATGGAGATAGTGAAGACGGAGATAACGACGACCACGATGATGAAAAGGGTAAAACGGGTTCTAACAAG
CTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTGAAATGGCAAGGACTGAGGTTGTGAAGCA
ACTGTGGAACCACATTAGAGGGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCACTCTTTTGTGTTGATTCCATCAACATGT
TTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAACGACGTTATTCCGGCCAAATCAAGTCAGAAAGAAAAGCAACAAAAGGAGAAGCAGGAAAAG
GAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGGCAGAAGCAAGGGAAAGAAGAAGGAAAAGCCAAGGTTGAAAACGCGATCCCAGATTTTACCCATTCAGATGACTC
TGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCAGATGCTCTGGTGACATTTCTTGGTACCGGAGAGAGTGCATTGTCTC
GCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGTGTTCAAATCATATGCTAGTATTCATCCATCATTCATGGCTTGTGATTTCACTTAG

mRNA sequence

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GCCACACGCCACACGCCACACGCCACACGCCACGGATAGTGTGCCCTCAACTCCAAATCCTACCCTCCTATCATCGATTGTTCTTCCTTCAATCTGCGAGGTTTTGCTCT
GCTTCGAATAAGATTGTGGATTTCAACAATGGTTTCCGACTCGGAGCTCATCGACCGGCTCCGAGAGTTTCTTCGGGATTCCGACCTCAATATCACCACCACTGCTATTG
TCCGCCGGAAGCTTGAGGAGTACTTTGGCGTTGATTTGTCCGATAAGAAGCGGTTTATTAGGGAACAGGTGGACTTGTTCCTCCAGACTGAGCATGAGAGAGAGGAGGAG
GAAGGTGGCGGCGACTGTGAGGAAGCCGACCAGGAGGATGGAGATGAAAATTTGAAGACGGAAGAGGAGGATGGAGATAGTGAAGACGGAGATAACGACGACCACGATGA
TGAAAAGGGTAAAACGGGTTCTAACAAGCTTGCGAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCTCCTCAACTTCAGGAATTTATAGGAGTTCCTG
AAATGGCAAGGACTGAGGTTGTGAAGCAACTGTGGAACCACATTAGAGGGAACAATTTGCAAGACCCCAGTAATAGAAGAAATATTCTCTGTGATGAATCGTTAAAGGCA
CTCTTTTGTGTTGATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCTTTGGAATCAAACGACGTTATTCCGGCCAAATCAAGTCAGAAAGA
AAAGCAACAAAAGGAGAAGCAGGAAAAGGAGAAGCAGCCAAAGGAGAAGCCACAAAAGAAGCGGCAGAAGCAAGGGAAAGAAGAAGGAAAAGCCAAGGTTGAAAACGCGA
TCCCAGATTTTACCCATTCAGATGACTCTGCAAGAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCTCTTCAACTTTCAGATGCTCTGGTGACATTT
CTTGGTACCGGAGAGAGTGCATTGTCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAATAACCTTCAGGTGTTCAAATCATATGCTAGTATTCATCC
ATCATTCATGGCTTGTGATTTCACTTAG

Protein sequence

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MVSDSELIDRLREFLRDSDLNITTTAIVRRKLEEYFGVDLSDKKRFIREQVDLFLQTEHEREEEEGGGDCEEADQEDGDENLKTEEEDGDSEDGDNDDHDDEKGKTGSNK
LAKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRRNILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEK
EKQPKEKPQKKRQKQGKEEGKAKVENAIPDFTHSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDVVKRMWDYIKQNNLQVFKSYASIHPSFMACDFT

CmoCh20G011570 (gene) of Cucurbita moschata (Rifu) v1 genome