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CmoCh20G011640 (gene) of Cucurbita moschata (Rifu) v1 genome

Gene IDCmoCh20G011640
OrganismCucurbita moschata Rifu (Cucurbita moschata (Rifu) v1)
Descriptionprotein RALF-like 34
Genome locationCmo_Chr20:11471045..11471428
RNA-Seq ExpressionCmoCh20G011640
SyntenyCmoCh20G011640
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
GO:0016020 - membrane (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571407.1 Protein RALF-like 34, partial [Cucurbita argyrosperma subsp. sororia]8.8e-6094.53Show/hide
Query:  MASKLLFPFFTI-LLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP
        MASKLLFPFFTI LLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDL      DHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP
Subjt:  MASKLLFPFFTI-LLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYSRGCSAITRCRR
        YYTHNCYKARGPVNPYSRGCSAITRCRR
Subjt:  YYTHNCYKARGPVNPYSRGCSAITRCRR

XP_004148071.1 protein RALF-like 34 [Cucumis sativus]1.1e-4679.69Show/hide
Query:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP
        MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     + D D D    DL QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRP
Subjt:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYSRGCSAITRCRR
        YYTHNCYKARGPVNPY+RGCSAITRCRR
Subjt:  YYTHNCYKARGPVNPYSRGCSAITRCRR

XP_008457868.1 PREDICTED: protein RALF-like 34 [Cucumis melo]2.5e-4680.47Show/hide
Query:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP
        MASK LLF  FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     D D D D    DL QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRP
Subjt:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYSRGCSAITRCRR
        YYTHNCYKARGPVNPYSRGCSAITRCRR
Subjt:  YYTHNCYKARGPVNPYSRGCSAITRCRR

XP_022928024.1 protein RALF-like 34 [Cucurbita moschata]3.3e-67100Show/hide
Query:  MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY
        MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY
Subjt:  MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY

Query:  YTHNCYKARGPVNPYSRGCSAITRCRR
        YTHNCYKARGPVNPYSRGCSAITRCRR
Subjt:  YTHNCYKARGPVNPYSRGCSAITRCRR

XP_023513191.1 protein RALF-like 34 [Cucurbita pepo subsp. pepo]3.6e-6195.28Show/hide
Query:  MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY
        MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDL      DHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY
Subjt:  MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY

Query:  YTHNCYKARGPVNPYSRGCSAITRCRR
        YTHNCYKARGPVNPYSRGCSAITRCRR
Subjt:  YTHNCYKARGPVNPYSRGCSAITRCRR

TrEMBL top hitse value%identityAlignment
A0A0A0LMS2 Uncharacterized protein5.4e-4779.69Show/hide
Query:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP
        MASK LLFP FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     + D D D    DL QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRP
Subjt:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYSRGCSAITRCRR
        YYTHNCYKARGPVNPY+RGCSAITRCRR
Subjt:  YYTHNCYKARGPVNPYSRGCSAITRCRR

A0A151TIM7 Uncharacterized protein1.1e-3168.63Show/hide
Query:  DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQD-PRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRC
        +T+L LM+DAL+WPTT+S+    +D D D D + +D+     RRSLFW R+ YYISYGAL+ANRIPCPPRSGR YYTHNCYKARGPV+PYSRGCS ITRC
Subjt:  DTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQD-PRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRC

Query:  RR
        RR
Subjt:  RR

A0A1S3C7S7 protein RALF-like 341.2e-4680.47Show/hide
Query:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP
        MASK LLF  FT+LLL LS++SAHL VDTSLKLMADALEWPTT S+     D D D D    DL QDPRRSLFW RVHYYISYGAL+ANRIPCPPRSGRP
Subjt:  MASK-LLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRP

Query:  YYTHNCYKARGPVNPYSRGCSAITRCRR
        YYTHNCYKARGPVNPYSRGCSAITRCRR
Subjt:  YYTHNCYKARGPVNPYSRGCSAITRCRR

A0A6J1EJN3 protein RALF-like 341.6e-67100Show/hide
Query:  MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY
        MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY
Subjt:  MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPY

Query:  YTHNCYKARGPVNPYSRGCSAITRCRR
        YTHNCYKARGPVNPYSRGCSAITRCRR
Subjt:  YTHNCYKARGPVNPYSRGCSAITRCRR

A0A6P4A840 protein RALF-like 348.3e-3267.23Show/hide
Query:  FTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPD-LDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKA
        F ILL L S + A L  DTSLKLM+DALEWPTT+S  D LD   + + D D        RRSLFW R+ YYISYGAL+ANRIPCPPRSGR YYTHNC+KA
Subjt:  FTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPD-LDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKA

Query:  RGPVNPYSRGCSAITRCRR
        RGPV+PY+RGCS ITRCRR
Subjt:  RGPVNPYSRGCSAITRCRR

SwissProt top hitse value%identityAlignment
Q8L9P8 Protein RALF-like 334.7e-0863.27Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR
        YISYGAL  N +PC  R G  YY  NC +     NPYSRGCSAITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR

Q945T0 Rapid alkalinization factor1.1e-0764.58Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCR
        YISYGAL  N +PC  R G  YY  NC K     NPYSRGCSAITRCR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCR

Q9FHA6 Protein RALF-like 345.0e-2650.82Show/hide
Query:  LFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNC
        L    ++L  +    S  L  + SL L+ D  +WP + S      D +   +   +D     RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC
Subjt:  LFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNC

Query:  YKARGPVNPYSRGCSAITRCRR
        ++ARGPV+PYSRGCS+ITRCRR
Subjt:  YKARGPVNPYSRGCSAITRCRR

Q9LUS7 Rapid alkalinization factor 233.6e-0865.31Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR
        YISYGAL  N IPC  R G  YY  NC +     NPYSRGCSAITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR

Q9MA62 Protein RALF-like 221.8e-0759.18Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR
        YISYGA+  N +PC  R G  YY  NC +     NPYSRGCS ITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 14.6e-0654.17Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCR
        YISY +L  N +PC  R G  YY  NC       NPYSRGCS I RCR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCR

AT3G05490.1 ralf-like 221.3e-0859.18Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR
        YISYGA+  N +PC  R G  YY  NC +     NPYSRGCS ITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR

AT3G16570.1 rapid alkalinization factor 232.6e-0965.31Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR
        YISYGAL  N IPC  R G  YY  NC +     NPYSRGCSAITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR

AT4G15800.1 ralf-like 333.4e-0963.27Show/hide
Query:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR
        YISYGAL  N +PC  R G  YY  NC +     NPYSRGCSAITRCRR
Subjt:  YISYGALAANRIPCPPRSGRPYYTHNCYKARGPVNPYSRGCSAITRCRR

AT5G67070.1 ralf-like 343.6e-2750.82Show/hide
Query:  LFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNC
        L    ++L  +    S  L  + SL L+ D  +WP + S      D +   +   +D     RRSL+W R  YYISYGAL+ANR+PCPPRSGR YYTHNC
Subjt:  LFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNC

Query:  YKARGPVNPYSRGCSAITRCRR
        ++ARGPV+PYSRGCS+ITRCRR
Subjt:  YKARGPVNPYSRGCSAITRCRR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCAAGCTCCTCTTCCCCTTCTTCACCATCCTCCTCCTCCTCCTCTCCGCCGCTTCCGCCCATCTCCCCGTCGACACCTCTCTCAAGCTCATGGCCGACGCCCT
CGAATGGCCCACCACAATCTCCATTCCCGACCTCGACCACGACCACGACCACGACCACGACCACGACCACGACGACCTTCACCAAGACCCGCGCAGATCTCTCTTCTGGA
GCCGAGTCCACTACTACATCTCCTACGGCGCTCTCGCCGCCAACCGGATCCCTTGCCCGCCTCGTTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCCCGCGGC
CCTGTCAATCCCTACAGCCGTGGATGCTCCGCCATCACCCGCTGCCGCCGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCAAGCTCCTCTTCCCCTTCTTCACCATCCTCCTCCTCCTCCTCTCCGCCGCTTCCGCCCATCTCCCCGTCGACACCTCTCTCAAGCTCATGGCCGACGCCCT
CGAATGGCCCACCACAATCTCCATTCCCGACCTCGACCACGACCACGACCACGACCACGACCACGACCACGACGACCTTCACCAAGACCCGCGCAGATCTCTCTTCTGGA
GCCGAGTCCACTACTACATCTCCTACGGCGCTCTCGCCGCCAACCGGATCCCTTGCCCGCCTCGTTCCGGCCGCCCTTACTACACTCACAACTGCTACAAGGCCCGCGGC
CCTGTCAATCCCTACAGCCGTGGATGCTCCGCCATCACCCGCTGCCGCCGCTGA
Protein sequenceShow/hide protein sequence
MASKLLFPFFTILLLLLSAASAHLPVDTSLKLMADALEWPTTISIPDLDHDHDHDHDHDHDDLHQDPRRSLFWSRVHYYISYGALAANRIPCPPRSGRPYYTHNCYKARG
PVNPYSRGCSAITRCRR