; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG00g03260 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG00g03260
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionTIR domain-containing protein
Genome locationCp4.1LG00:12219798..12220577
RNA-Seq ExpressionCp4.1LG00g03260
SyntenyCp4.1LG00g03260
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
InterPro domainsIPR007592 - GLABROUS1 enhancer-binding protein family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054121.1 hypothetical protein E6C27_scaffold131G00330 [Cucumis melo var. makuwa]1.86e-5152.33Show/hide
Query:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLE-KLESRVQMVSHV--------DDERDESFELS
        S ++K+ K+LF+WS+GEELNLL KLVEF++ N+  E+FYPFLRNGSLA+V KIQIFDKIQQLK ++LE KLE R     +V        +D+RDE FELS
Subjt:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLE-KLESRVQMVSHV--------DDERDESFELS

Query:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST
        N+LWGE +   ET+  S SKA +  S + +E  FE   L +  F PSF +ATKK +D   +L++H  L KA L AQ+ QLK+ L Q R  N T
Subjt:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST

KAG6575378.1 hypothetical protein SDJN03_26017, partial [Cucurbita argyrosperma subsp. sororia]9.42e-2154.08Show/hide
Query:  VDDERDESFELSNRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQ
        ++ ++DE FELS R  GENEIET++ + ST    +  +  +FEAL E H L LD F PS L+A KK++DE   LQN +SLIKANLKAQLAQLKH + +
Subjt:  VDDERDESFELSNRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQ

KAG6585881.1 hypothetical protein SDJN03_18614, partial [Cucurbita argyrosperma subsp. sororia]7.13e-12795.45Show/hide
Query:  MRKRKDIIKDSSTRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDER---DE
        MRKRKDIIKD+STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLR+GSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSH DDER   DE
Subjt:  MRKRKDIIKDSSTRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDER---DE

Query:  SFELSNRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST
        SFELSNRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFL+ATKK+MDE LDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST
Subjt:  SFELSNRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST

KGN49711.1 hypothetical protein Csa_018385 [Cucumis sativus]9.62e-3140.41Show/hide
Query:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHL-EKLESRVQMVSHV----DDE----RDESFELS
        S ++K+ K+LF+WS+GEELNLL KLVEF+  N+  E+FYPFLRNGSLA+V + QIF+KIQ+LKR++L +KLE R     +V    DD+    RDE FELS
Subjt:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHL-EKLESRVQMVSHV----DDE----RDESFELS

Query:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST
        N +WG+ +   ET+  S SK  +                          +A KK +D   +L++   L K+ L ++L +LK+ + Q    + T
Subjt:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST

XP_022158994.1 probable transcription factor At4g00610 [Momordica charantia]6.95e-0831.07Show/hide
Query:  TRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDH-EQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFEL--SNRLWG--
        T++KKA   F+W E +E+ +L +L EFS  N  + E+FY F++      V   Q+ +KI+ L+RK+LE  E           ++ +   L  S R+WG  
Subjt:  TRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDH-EQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFEL--SNRLWG--

Query:  ENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLI--KANLKAQLAQL
        ENE E + +N   +++ + +     E+L E   + +D   PS LE   K  D  +    H  L+  K  L A+L +L
Subjt:  ENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLI--KANLKAQLAQL

TrEMBL top hitse value%identityAlignment
A0A0A0KPQ5 Uncharacterized protein4.66e-3140.41Show/hide
Query:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHL-EKLESRVQMVSHV----DDE----RDESFELS
        S ++K+ K+LF+WS+GEELNLL KLVEF+  N+  E+FYPFLRNGSLA+V + QIF+KIQ+LKR++L +KLE R     +V    DD+    RDE FELS
Subjt:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHL-EKLESRVQMVSHV----DDE----RDESFELS

Query:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST
        N +WG+ +   ET+  S SK  +                          +A KK +D   +L++   L K+ L ++L +LK+ + Q    + T
Subjt:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST

A0A1S4A186 uncharacterized protein LOC1077927221.28e-0623.73Show/hide
Query:  WSEGEELNLLNKLVEFSANN-----LDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFELSNRLWGENEIETETQNV
        WSE +EL +L +++E+ +        +++ FY F+++   A+V   Q+ +KI+++KRK++  +  R     H +    + FELS  +WG+N ++ E +  
Subjt:  WSEGEELNLLNKLVEFSANN-----LDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFELSNRLWGENEIETETQNV

Query:  STS-------KAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQ
                  K   A   +S      G SL L   + + LE   ++    +  +  H ++K +   ++A+ +H L +
Subjt:  STS-------KAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQ

A0A5A7UKP8 Uncharacterized protein8.98e-5252.33Show/hide
Query:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLE-KLESRVQMVSHV--------DDERDESFELS
        S ++K+ K+LF+WS+GEELNLL KLVEF++ N+  E+FYPFLRNGSLA+V KIQIFDKIQQLK ++LE KLE R     +V        +D+RDE FELS
Subjt:  STRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLE-KLESRVQMVSHV--------DDERDESFELS

Query:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST
        N+LWGE +   ET+  S SKA +  S + +E  FE   L +  F PSF +ATKK +D   +L++H  L KA L AQ+ QLK+ L Q R  N T
Subjt:  NRLWGENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENST

A0A5N6RJC3 Uncharacterized protein4.17e-0632Show/hide
Query:  IIKDSSTRQKKA---KTLFQ--WSEGEELNLLNKLVEFSANN-----LDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKH---LEKLESRVQMVSHVDD
        ++   +T++  A   K LFQ  WSEG+E+ +L  ++EF+A        D   F+ F++     DV K Q+ DKI++LK+K+    E+ +   Q+ +    
Subjt:  IIKDSSTRQKKA---KTLFQ--WSEGEELNLLNKLVEFSANN-----LDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKH---LEKLESRVQMVSHVDD

Query:  ERDESFELSNRLWGENEIETETQNV
        E  ++FELS ++WG  E   E + V
Subjt:  ERDESFELSNRLWGENEIETETQNV

A0A6J1E125 probable transcription factor At4g006103.36e-0831.07Show/hide
Query:  TRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDH-EQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFEL--SNRLWG--
        T++KKA   F+W E +E+ +L +L EFS  N  + E+FY F++      V   Q+ +KI+ L+RK+LE  E           ++ +   L  S R+WG  
Subjt:  TRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDH-EQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFEL--SNRLWG--

Query:  ENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLI--KANLKAQLAQL
        ENE E + +N   +++ + +     E+L E   + +D   PS LE   K  D  +    H  L+  K  L A+L +L
Subjt:  ENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLI--KANLKAQLAQL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGGTATGAGAAAACGAAAGGATATAATTAAAGATAGTTCCACGAGACAAAAGAAGGCAAAGACTTTGTTTCAATGGAGTGAAGGGGAAGAGTTGAATCTACT
CAACAAGTTGGTAGAGTTCTCCGCTAATAACCTTGATCATGAACAATTTTATCCATTTTTGAGAAATGGGTCATTAGCGGACGTGCCCAAGATTCAAATATTCGACAAGA
TTCAACAGCTCAAAAGAAAACATTTGGAGAAATTAGAGTCGAGAGTGCAAATGGTATCGCATGTTGATGATGAGAGGGATGAGAGTTTTGAGTTATCAAATCGACTTTGG
GGAGAAAATGAAATTGAAACTGAAACTCAAAATGTTTCCACCTCTAAAGCGTTCGATGCGTGGAGCATGAGTTCGTTTGAAGCGTTGTTTGAAGGTCATTCGCTTCATTT
AGATGCATTTACGCCATCTTTTTTGGAGGCAACCAAGAAGAAAATGGATGAACGGTTAGATCTACAAAATCACCACTCCTTAATCAAAGCTAACTTGAAGGCACAACTTG
CTCAATTAAAGCACCACCTCACTCAAACTCGCTTTGAAAATAGTACTACGGGACAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTGGTATGAGAAAACGAAAGGATATAATTAAAGATAGTTCCACGAGACAAAAGAAGGCAAAGACTTTGTTTCAATGGAGTGAAGGGGAAGAGTTGAATCTACT
CAACAAGTTGGTAGAGTTCTCCGCTAATAACCTTGATCATGAACAATTTTATCCATTTTTGAGAAATGGGTCATTAGCGGACGTGCCCAAGATTCAAATATTCGACAAGA
TTCAACAGCTCAAAAGAAAACATTTGGAGAAATTAGAGTCGAGAGTGCAAATGGTATCGCATGTTGATGATGAGAGGGATGAGAGTTTTGAGTTATCAAATCGACTTTGG
GGAGAAAATGAAATTGAAACTGAAACTCAAAATGTTTCCACCTCTAAAGCGTTCGATGCGTGGAGCATGAGTTCGTTTGAAGCGTTGTTTGAAGGTCATTCGCTTCATTT
AGATGCATTTACGCCATCTTTTTTGGAGGCAACCAAGAAGAAAATGGATGAACGGTTAGATCTACAAAATCACCACTCCTTAATCAAAGCTAACTTGAAGGCACAACTTG
CTCAATTAAAGCACCACCTCACTCAAACTCGCTTTGAAAATAGTACTACGGGACAGTAA
Protein sequenceShow/hide protein sequence
MDVGMRKRKDIIKDSSTRQKKAKTLFQWSEGEELNLLNKLVEFSANNLDHEQFYPFLRNGSLADVPKIQIFDKIQQLKRKHLEKLESRVQMVSHVDDERDESFELSNRLW
GENEIETETQNVSTSKAFDAWSMSSFEALFEGHSLHLDAFTPSFLEATKKKMDERLDLQNHHSLIKANLKAQLAQLKHHLTQTRFENSTTGQ