; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG00g04410 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG00g04410
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptioneukaryotic translation initiation factor 2 beta subunit
Genome locationCp4.1LG00:16341485..16343586
RNA-Seq ExpressionCp4.1LG00g04410
SyntenyCp4.1LG00g04410
Gene Ontology termsGO:0001731 - formation of translation preinitiation complex (biological process)
GO:0001732 - formation of cytoplasmic translation initiation complex (biological process)
GO:0005850 - eukaryotic translation initiation factor 2 complex (cellular component)
GO:0003729 - mRNA binding (molecular function)
GO:0003743 - translation initiation factor activity (molecular function)
GO:0031369 - translation initiation factor binding (molecular function)
InterPro domainsIPR002735 - Translation initiation factor IF2/IF5
IPR016189 - Translation initiation factor IF2/IF5, N-terminal
IPR016190 - Translation initiation factor IF2/IF5, zinc-binding


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8039432.1 hypothetical protein FH972_011843 [Carpinus fangiana]1.68e-8499.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+NEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

PON49680.1 Translation initiation factor 2, beta subunit [Parasponia andersonii]2.78e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

PON74873.1 Translation initiation factor 2, beta subunit [Trema orientale]2.78e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

XP_023521180.1 LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2 subunit beta-like, partial [Cucurbita pepo subsp. pepo]1.88e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

XP_023524549.1 eukaryotic translation initiation factor 2 subunit beta-like, partial [Cucurbita pepo subsp. pepo]6.10e-85100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

TrEMBL top hitse value%identityAlignment
A0A2N9IPG3 eIF2B_5 domain-containing protein1.44e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

A0A2P5BLP5 Translation initiation factor 2, beta subunit1.34e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

A0A2P5DNL0 Translation initiation factor 2, beta subunit1.34e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

A0A660KSQ7 eIF2B_5 domain-containing protein8.14e-8599.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+NEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

A0A6J1DUN0 eukaryotic translation initiation factor 2 subunit beta-like isoform X31.44e-84100Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        ICIGCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

SwissProt top hitse value%identityAlignment
O24473 Eukaryotic translation initiation factor 2 subunit beta5.4e-6592.8Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNP+LAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQP+HVM FLLAE+GTSGSLDGQQRLV+KGRFAPKNFE ILRRY+NEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        IC GCKSPDTILSKENRLFFLRCE+
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

P20042 Eukaryotic translation initiation factor 2 subunit 21.3e-4565.6Show/hide
Query:  LLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEY
        LL RVFNI+RE NP++ AG++R+ VM+PPQV+R GTKKT FVNF D+CK +HRQP H++AFLLAELGTSGS+DG  +LV+KGRF  K  E +LRRY+ EY
Subjt:  LLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEY

Query:  VICIGCKSPDTILSKENRLFFLRCE
        V C  C+SPDTIL K+ RL+FL+CE
Subjt:  VICIGCKSPDTILSKENRLFFLRCE

P55871 Eukaryotic translation initiation factor 2 subunit beta1.1e-6595.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LL RVF ILRENNP+LAGDRRRTVMRPPQVLREGTKK VFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        IC+GC+SPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

Q41969 Eukaryotic translation initiation factor 2 subunit beta1.7e-6695.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM +LLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+ +YV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        IC+GCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

Q5E9D0 Eukaryotic translation initiation factor 2 subunit 21.3e-4565.6Show/hide
Query:  LLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEY
        LL RVFNI+RE NP++ AG++R+ VM+PPQV+R GTKKT FVNF D+CK +HRQP H++AFLLAELGTSGS+DG  +LV+KGRF  K  E +LRRY+ EY
Subjt:  LLGRVFNILRENNPEL-AGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEY

Query:  VICIGCKSPDTILSKENRLFFLRCE
        V C  C+SPDTIL K+ RL+FL+CE
Subjt:  VICIGCKSPDTILSKENRLFFLRCE

Arabidopsis top hitse value%identityAlignment
AT3G07920.1 Translation initiation factor IF2/IF56.2e-4871.32Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLRE----GTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYV
        +L RVFNILREN+PEL G    T++ PPQVLRE    GTKKTVFVNFMD CKTMHR PDHVMAFLLAELGT G LD QQRLVV+GRF  ++FE +LR Y+
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLRE----GTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYV

Query:  NEYVICIGCKSPDTILSKENRLFFLRCEK
         +YV+CI CKS + ILSKENRLFFLRC K
Subjt:  NEYVICIGCKSPDTILSKENRLFFLRCEK

AT5G01940.1 eukaryotic translation initiation factor 2B family protein / eIF-2B family protein4.6e-3556.8Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LL  VF+ LRE + E++ +R RTVM PPQ+L EGT  TV +NF DLC+TMHR+PDHVM FLLA++ T  SL+ QQRL +KG  + K+F+ + R+Y++ +V
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKE-NRLFFLRCE
        IC+ CKSPDT L++E N LF LRCE
Subjt:  ICIGCKSPDTILSKE-NRLFFLRCE

AT5G20920.1 eukaryotic translation initiation factor 2 beta subunit1.2e-6795.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM +LLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+ +YV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        IC+GCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

AT5G20920.2 eukaryotic translation initiation factor 2 beta subunit1.2e-6795.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM +LLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+ +YV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        IC+GCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK

AT5G20920.3 eukaryotic translation initiation factor 2 beta subunit1.2e-6795.2Show/hide
Query:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV
        LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVM +LLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRY+ +YV
Subjt:  LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYV

Query:  ICIGCKSPDTILSKENRLFFLRCEK
        IC+GCKSPDTILSKENRLFFLRCEK
Subjt:  ICIGCKSPDTILSKENRLFFLRCEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
CTTCTTGGACGGGTATTTAACATTCTTAGAGAGAATAATCCAGAGCTTGCAGGTGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAA
AACTGTTTTCGTCAATTTCATGGATCTATGTAAAACGATGCATCGTCAGCCAGACCATGTTATGGCTTTCTTATTGGCGGAACTGGGAACCAGTGGATCTCTTGATGGAC
AGCAGAGATTGGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGAAGATATGTCAATGAGTATGTTATTTGCATTGGGTGCAAGAGTCCAGACACT
ATCCTTTCAAAGGAGAATCGACTGTTCTTTCTCAGATGCGAGAAG
mRNA sequenceShow/hide mRNA sequence
CTTCTTGGACGGGTATTTAACATTCTTAGAGAGAATAATCCAGAGCTTGCAGGTGATAGGCGTAGAACAGTTATGAGGCCTCCTCAAGTTCTTCGTGAAGGCACAAAGAA
AACTGTTTTCGTCAATTTCATGGATCTATGTAAAACGATGCATCGTCAGCCAGACCATGTTATGGCTTTCTTATTGGCGGAACTGGGAACCAGTGGATCTCTTGATGGAC
AGCAGAGATTGGTTGTTAAAGGAAGGTTTGCACCAAAGAACTTTGAAGGAATTCTGCGAAGATATGTCAATGAGTATGTTATTTGCATTGGGTGCAAGAGTCCAGACACT
ATCCTTTCAAAGGAGAATCGACTGTTCTTTCTCAGATGCGAGAAG
Protein sequenceShow/hide protein sequence
LLGRVFNILRENNPELAGDRRRTVMRPPQVLREGTKKTVFVNFMDLCKTMHRQPDHVMAFLLAELGTSGSLDGQQRLVVKGRFAPKNFEGILRRYVNEYVICIGCKSPDT
ILSKENRLFFLRCEK