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Cp4.1LG00g04480 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG00g04480
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptiontransmembrane protein 208 homolog
Genome locationCp4.1LG00:16611577..16612207
RNA-Seq ExpressionCp4.1LG00g04480
SyntenyCp4.1LG00g04480
Gene Ontology termsGO:0006624 - vacuolar protein processing (biological process)
GO:0005773 - vacuole (cellular component)
GO:0005789 - endoplasmic reticulum membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR008506 - SRP-independent targeting protein 2/TMEM208


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0043099.1 transmembrane protein 208-like protein [Cucumis melo var. makuwa]2.39e-4392.77Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLI+ LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
XP_008452429.1 PREDICTED: transmembrane protein 208 homolog [Cucumis melo]1.85e-4292.77Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLI+ LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
XP_022946520.1 transmembrane protein 208 homolog [Cucurbita moschata]2.40e-4597.59Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
XP_023521195.1 transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo]2.40e-4597.59Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
XP_023547345.1 transmembrane protein 208 homolog [Cucurbita pepo subsp. pepo]3.25e-51100Show/hide
Query:  MGCLVLCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        MGCLVLCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Subjt:  MGCLVLCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
TrEMBL top hitse value%identityAlignment
A0A1S3BUY1 transmembrane protein 208 homolog8.94e-4392.77Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLI+ LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
A0A5D3BBK4 Transmembrane protein 208-like protein1.15e-4392.77Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLI+ LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
A0A6J1G433 transmembrane protein 208 homolog1.16e-4597.59Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
A0A6J1I0K5 transmembrane protein 208 homolog2.55e-4291.57Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C Y+HD+IYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIK LLS GSEDEPEDEKTRKKREKMEKKASRVKF+KTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
A0A6J1KBQ8 transmembrane protein 208 homolog1.16e-4597.59Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C YMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G23940.1 Protein of unknown function (DUF788)6.1e-2669.88Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C Y+HDVIYIT FVQ+ SI++GKFWYTYLVIPAFGVYK+SGLI+  +S GSE   EDEK+RKKREKME+KASR + +KT+ R
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
AT4G30500.1 Protein of unknown function (DUF788)1.9e-2773.49Show/hide
Query:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR
        +C Y+HDV+YIT FVQ+ SI+SGKFWY YLVIPAFG YK+SGLIK LLSHGSE   EDEKTRKKREKME+KASR + +KT++R
Subjt:  LCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTGCCTTGTTCTTTGCAGCTACATGCATGACGTGATCTACATTACGAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGAT
TCCAGCATTTGGGGTATACAAATCTTCTGGTTTAATTAAGAGTTTATTGTCGCACGGTTCAGAGGATGAACCTGAGGATGAGAAGACTCGCAAGAAGAGGGAAAAGATGG
AGAAGAAAGCTTCAAGAGTGAAGTTTATGAAAACCAAGAATAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTGCCTTGTTCTTTGCAGCTACATGCATGACGTGATCTACATTACGAGCTTTGTGCAAATAATGTCAATCCTCTCTGGGAAGTTTTGGTACACCTACCTTGTGAT
TCCAGCATTTGGGGTATACAAATCTTCTGGTTTAATTAAGAGTTTATTGTCGCACGGTTCAGAGGATGAACCTGAGGATGAGAAGACTCGCAAGAAGAGGGAAAAGATGG
AGAAGAAAGCTTCAAGAGTGAAGTTTATGAAAACCAAGAATAGATAA
Protein sequenceShow/hide protein sequence
MGCLVLCSYMHDVIYITSFVQIMSILSGKFWYTYLVIPAFGVYKSSGLIKSLLSHGSEDEPEDEKTRKKREKMEKKASRVKFMKTKNR