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Cp4.1LG01g02460 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG01g02460
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionLYR motif-containing protein At3g19508
Genome locationCp4.1LG01:2438760..2439642
RNA-Seq ExpressionCp4.1LG01g02460
SyntenyCp4.1LG01g02460
Gene Ontology termsNA
InterPro domainsIPR008011 - Complex 1 LYR protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004140718.1 LYR motif-containing protein At3g19508 [Cucumis sativus]9.78e-4690Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
        MEKALR+Y EVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
XP_008456173.1 PREDICTED: LYR motif-containing protein At3g19508 [Cucumis melo]3.54e-4892.68Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALR+Y EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
XP_022941949.1 LYR motif-containing protein At3g19508 [Cucurbita moschata]2.76e-52100Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
XP_022983545.1 LYR motif-containing protein At3g19508 [Cucurbita maxima]3.23e-5198.8Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
XP_038898400.1 LYR motif-containing protein At3g19508 [Benincasa hispida]7.14e-4893.9Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALRIY EVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAY HS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
TrEMBL top hitse value%identityAlignment
A0A0A0L970 Uncharacterized protein4.73e-4690Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
        MEKALR+Y EVLRLVR+LPKD+RPYYAKY RENFVNYREVDA DAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
A0A1S3C3W4 LYR motif-containing protein At3g195081.71e-4892.68Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALR+Y EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
A0A5A7T6G8 LYR motif-containing protein1.71e-4892.68Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
        MEKALR+Y EVLRLVRRLPKD+RPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHS+WVLNKYSV+GSAADKLKEIC S
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNS
A0A6J1FPX9 LYR motif-containing protein At3g195081.34e-52100Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
A0A6J1J656 LYR motif-containing protein At3g195081.56e-5198.8Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
        MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELF+RAYNHSVWVLNKYSVNGSAADKLKEICNSS
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS
SwissProt top hitse value%identityAlignment
A9SNJ1 LYR motif-containing protein PHYPADRAFT_1868638.7e-1156.9Show/hide
Query:  YAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNK
        Y EVL+LV+RLP  SR YYA+YARENFV Y EV+  D +S+  L  R ++H+ WVL K
Subjt:  YAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNK
Q1G3M2 LYR motif-containing protein At3g195086.6e-2773.75Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
        M+K LR+Y  V+RLVR LP DSRPYYAKYARENFVNYREVD ++  SL+ELF RAYNHS+WVL KYS++ SAA KLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
Arabidopsis top hitse value%identityAlignment
AT3G19508.1 unknown protein4.7e-2873.75Show/hide
Query:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC
        M+K LR+Y  V+RLVR LP DSRPYYAKYARENFVNYREVD ++  SL+ELF RAYNHS+WVL KYS++ SAA KLKEIC
Subjt:  MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEIC

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAAGGCCCTGCGAATATACGCCGAGGTTCTGAGGCTGGTGAGGCGGTTGCCGAAGGATTCGAGGCCTTACTACGCTAAATACGCTCGAGAGAATTTCGTCAACTA
CAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAACCACTCCGTTTGGGTTCTCAATAAGTATTCGGTGAATGGATCTGCGGCGG
ATAAGCTGAAGGAGATTTGTAATAGCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ACCGGGCCTCATTATCGTGAAGTAATAAACGTGGAAAAGGGACTTACCTGGCCCAAACAGCACTCAAAAGCCCTAGAAACTGAAGCGATCGAAATCGAGAACCAGACGGC
GGAGAATTTCGATCGGAGAGAAATGGAGAAGGCCCTGCGAATATACGCCGAGGTTCTGAGGCTGGTGAGGCGGTTGCCGAAGGATTCGAGGCCTTACTACGCTAAATACG
CTCGAGAGAATTTCGTCAACTACAGAGAAGTCGATGCGAACGATGCCAAATCCCTAGAAGAACTCTTCCACAGAGCTTACAACCACTCCGTTTGGGTTCTCAATAAGTAT
TCGGTGAATGGATCTGCGGCGGATAAGCTGAAGGAGATTTGTAATAGCTCCTAGTTAGTGTGCGATTTCCGTCATTTGTTTGAAATAATGCCTCAAAGGGATCGGCGTTG
GCTTTCGCCCTTGCAACTCCGGCTACTACTGCCGCCGTGGATTCTGACGAATTCGTTTCCGGTACGGATTTGGAGGATTATTGAATTAAAAGGAATTTTACATTATTTGA
AAAATAATATTTGCAAATTATGTTTATAGGATAATTGAGAATAAGTTGTCTATTTAATCAGATAGTTGTTGATATAATTTTTATAAAAATATATAAACATTTAATTATAA
ATAATTATATTTCAAAATTATATACAAAATTATATACAAAGTATAAACTATTTACTTAATTAATTGTAGTTCGTTATTATTAATTATAAATTGAAATTTAATTAATTAA
Protein sequenceShow/hide protein sequence
MEKALRIYAEVLRLVRRLPKDSRPYYAKYARENFVNYREVDANDAKSLEELFHRAYNHSVWVLNKYSVNGSAADKLKEICNSS