; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG01g03210 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG01g03210
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptionlate embryogenesis abundant protein At5g17165-like isoform X2
Genome locationCp4.1LG01:1907219..1912741
RNA-Seq ExpressionCp4.1LG01g03210
SyntenyCp4.1LG01g03210
Gene Ontology termsNA
InterPro domainsIPR039291 - Late embryogenesis abundant protein At5g17165-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600216.1 Late embryogenesis abundant protein, partial [Cucurbita argyrosperma subsp. sororia]8.11e-6381.89Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG
        MAANSRSAGAIAGLGKRITNQIWT DSAISSSALKFR A   S   D+         +VPDDVIQPQ AEKYWAPHPHTGVFGPE DQ TA AGSRAADG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG

Query:  GNHAAAEEEKAWFRPTSLEDSEKPHGF
        GNHAAAEEEKAWFRPTSLEDSEKPHGF
Subjt:  GNHAAAEEEKAWFRPTSLEDSEKPHGF

XP_022941802.1 late embryogenesis abundant protein At5g17165-like isoform X1 [Cucurbita moschata]8.45e-6583.46Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFR A   S   D+         +VPDDVIQPQ AEKYWAPHPHTGVFGPE DQPTA AGSRAADG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG

Query:  GNHAAAEEEKAWFRPTSLEDSEKPHGF
        GNHAAAEEEKAWFRPTSLEDSEKPHGF
Subjt:  GNHAAAEEEKAWFRPTSLEDSEKPHGF

XP_022941803.1 late embryogenesis abundant protein At5g17165-like isoform X2 [Cucurbita moschata]4.05e-6583.2Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFR A   ++  +        +VPDDVIQPQ AEKYWAPHPHTGVFGPE DQPTA AGSRAADGGN
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN

Query:  HAAAEEEKAWFRPTSLEDSEKPHGF
        HAAAEEEKAWFRPTSLEDSEKPHGF
Subjt:  HAAAEEEKAWFRPTSLEDSEKPHGF

XP_022990298.1 late embryogenesis abundant protein At5g17165-like isoform X2 [Cucurbita maxima]6.18e-6078.4Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKFR A   ++  +        +VPDDVIQPQ AEKYWAPHPHTGVFGPE +QPTA   +RAADGGN
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN

Query:  HAAAEEEKAWFRPTSLEDSEKPHGF
        HAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  HAAAEEEKAWFRPTSLEDSEKPHGF

XP_023512363.1 late embryogenesis abundant protein At5g17165-like [Cucurbita pepo subsp. pepo]6.00e-6785.6Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFR A   ++  +        +VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN

Query:  HAAAEEEKAWFRPTSLEDSEKPHGF
        HAAAEEEKAWFRPTSLEDSEKPHGF
Subjt:  HAAAEEEKAWFRPTSLEDSEKPHGF

TrEMBL top hitse value%identityAlignment
A0A1S3BYE5 uncharacterized protein LOC1034944371.42e-4869.47Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTS-----DSAISSSALKFRTALFLSFGIDQ--------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGS-
        MAANSRSAGAIAGLGKRIT+QIWTS     +S ISSSA KFR A   S             +VPDDVIQPQ A+KYWAPHP TGVFGP  D P AVA + 
Subjt:  MAANSRSAGAIAGLGKRITNQIWTS-----DSAISSSALKFRTALFLSFGIDQ--------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGS-

Query:  RAADGGNHAAAEEEKAWFRPTSLEDSEKPHG
        RAAD GN++AAEEEKAWFRPTSLEDSEKPHG
Subjt:  RAADGGNHAAAEEEKAWFRPTSLEDSEKPHG

A0A6J1FNH5 late embryogenesis abundant protein At5g17165-like isoform X14.09e-6583.46Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFR A   S   D+         +VPDDVIQPQ AEKYWAPHPHTGVFGPE DQPTA AGSRAADG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG

Query:  GNHAAAEEEKAWFRPTSLEDSEKPHGF
        GNHAAAEEEKAWFRPTSLEDSEKPHGF
Subjt:  GNHAAAEEEKAWFRPTSLEDSEKPHGF

A0A6J1FT47 late embryogenesis abundant protein At5g17165-like isoform X21.96e-6583.2Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN
        MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFR A   ++  +        +VPDDVIQPQ AEKYWAPHPHTGVFGPE DQPTA AGSRAADGGN
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN

Query:  HAAAEEEKAWFRPTSLEDSEKPHGF
        HAAAEEEKAWFRPTSLEDSEKPHGF
Subjt:  HAAAEEEKAWFRPTSLEDSEKPHGF

A0A6J1JRN3 late embryogenesis abundant protein At5g17165-like isoform X16.24e-6078.74Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKFR A   S   D+         +VPDDVIQPQ AEKYWAPHPHTGVFGPE +QPTA   +RAADG
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQ---------LVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADG

Query:  GNHAAAEEEKAWFRPTSLEDSEKPHGF
        GNHAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  GNHAAAEEEKAWFRPTSLEDSEKPHGF

A0A6J1JSV5 late embryogenesis abundant protein At5g17165-like isoform X22.99e-6078.4Show/hide
Query:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN
        MAANSRSAGAIAGLGKRITNQI TSDSAISSSALKFR A   ++  +        +VPDDVIQPQ AEKYWAPHPHTGVFGPE +QPTA   +RAADGGN
Subjt:  MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGID-------QLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGN

Query:  HAAAEEEKAWFRPTSLEDSEKPHGF
        HAA EEEKAWFRPTSLEDSEKPHGF
Subjt:  HAAAEEEKAWFRPTSLEDSEKPHGF

SwissProt top hitse value%identityAlignment
F4KFM8 Late embryogenesis abundant protein At5g171653.9e-1253.73Show/hide
Query:  VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLEDSEKPH
        VPD++I+P  ++KYW+PHP TGVFGP      A    R   GG   +  EEKAWFRPTSLED +K H
Subjt:  VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLEDSEKPH

Arabidopsis top hitse value%identityAlignment
AT3G03150.1 unknown protein1.2e-1355.22Show/hide
Query:  VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLEDSEKPH
        VPD+VI+P  ++KYW+PHP TGVFGP   + +A A     D     A  EE AWFRPTSLEDS+K H
Subjt:  VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLEDSEKPH

AT5G17165.1 unknown protein2.7e-1353.73Show/hide
Query:  VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLEDSEKPH
        VPD++I+P  ++KYW+PHP TGVFGP      A    R   GG   +  EEKAWFRPTSLED +K H
Subjt:  VPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLEDSEKPH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGAAAACGAATCACAAACCAGATCTGGACCAGCGATTCTGCGATCTCCTCCTCTGCTCTGAAGTTCAG
GACAGCGTTGTTCTTATCATTTGGAATTGATCAGTTAGTCCCTGATGATGTGATTCAGCCTCAAGTTGCTGAAAAGTACTGGGCTCCTCATCCACACACCGGCGTTTTTG
GGCCAGAGGTCGATCAGCCTACTGCAGTGGCGGGAAGCCGTGCTGCAGATGGTGGCAACCACGCTGCTGCGGAGGAGGAAAAGGCGTGGTTCCGACCAACCAGTCTGGAG
GATTCCGAGAAACCCCACGGGTTTTAG
mRNA sequenceShow/hide mRNA sequence
TGCGTTGAGAGCTTTTGTCGGCTTTTGGCGGGTATGATACGACGCCGTACTGGCGAACTATAAAAGAAGGATTTGCTGCTTCAGGATTAGAATCAAGAATCAAAAGCAAT
TACTCGCCGTTTTTCTTCTTCATTCTCTCTCTCTGTTTAAGCCTGAATTGTATGGCCGCCAATTCGAGGAGCGCAGGAGCGATCGCCGGCTTGGGAAAACGAATCACAAA
CCAGATCTGGACCAGCGATTCTGCGATCTCCTCCTCTGCTCTGAAGTTCAGGACAGCGTTGTTCTTATCATTTGGAATTGATCAGTTAGTCCCTGATGATGTGATTCAGC
CTCAAGTTGCTGAAAAGTACTGGGCTCCTCATCCACACACCGGCGTTTTTGGGCCAGAGGTCGATCAGCCTACTGCAGTGGCGGGAAGCCGTGCTGCAGATGGTGGCAAC
CACGCTGCTGCGGAGGAGGAAAAGGCGTGGTTCCGACCAACCAGTCTGGAGGATTCCGAGAAACCCCACGGGTTTTAG
Protein sequenceShow/hide protein sequence
MAANSRSAGAIAGLGKRITNQIWTSDSAISSSALKFRTALFLSFGIDQLVPDDVIQPQVAEKYWAPHPHTGVFGPEVDQPTAVAGSRAADGGNHAAAEEEKAWFRPTSLE
DSEKPHGF