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Cp4.1LG02g04410 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG02g04410
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionPolyamine-modulated factor 1-binding protein
Genome locationCp4.1LG02:2347640..2349817
RNA-Seq ExpressionCp4.1LG02g04410
SyntenyCp4.1LG02g04410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004136463.2 uncharacterized protein LOC101215419 [Cucumis sativus]5.07e-3267.33Show/hide
Query:  MATSESKPDDRSI------SLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGG
        MATSESKP+D+ I      SLPESESQLS L++DISQQAQGAMENMLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNNGG
Subjt:  MATSESKPDDRSI------SLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGG

Query:  G
        G
Subjt:  G
XP_023524409.1 uncharacterized protein LOC111788313 [Cucurbita pepo subsp. pepo]8.43e-65100Show/hide
Query:  MMELLRSSCSGISAMATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRTLLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDM
        MMELLRSSCSGISAMATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRTLLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDM
Subjt:  MMELLRSSCSGISAMATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRTLLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDM

Query:  LNNGGGTL
        LNNGGGTL
Subjt:  LNNGGGTL
XP_038898229.1 uncharacterized protein LOC120085955 isoform X1 [Benincasa hispida]6.98e-3369.07Show/hide
Query:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
        MATSESKP D+ I LPESESQLS L++DISQQAQGAME+MLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNNG GTL
Subjt:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
XP_038898230.1 uncharacterized protein LOC120085955 isoform X2 [Benincasa hispida]6.39e-3369.07Show/hide
Query:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
        MATSESKP D+ I LPESESQLS L++DISQQAQGAME+MLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNNG GTL
Subjt:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
XP_038898231.1 uncharacterized protein LOC120085955 isoform X3 [Benincasa hispida]5.04e-3369.07Show/hide
Query:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
        MATSESKP D+ I LPESESQLS L++DISQQAQGAME+MLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNNG GTL
Subjt:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
TrEMBL top hitse value%identityAlignment
A0A0A0LJE0 Uncharacterized protein2.68e-3267.33Show/hide
Query:  MATSESKPDDRSI------SLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGG
        MATSESKP+D+ I      SLPESESQLS L++DISQQAQGAMENMLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNNGG
Subjt:  MATSESKPDDRSI------SLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGG

Query:  G
        G
Subjt:  G
A0A5A7TBQ0 Uncharacterized protein3.71e-3166.35Show/hide
Query:  MATSESKPDDRSI------SLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNN-G
        MATSESKP+D+ I      SLPE ESQLS L++DISQQAQGAMENMLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNN G
Subjt:  MATSESKPDDRSI------SLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNN-G

Query:  GGTL
        GGTL
Subjt:  GGTL
A0A6J1CHL8 uncharacterized protein LOC1110114972.32e-3165.98Show/hide
Query:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
        MATS  KPDD+ I+LPE+ESQLSVL+ D+SQQ QGAMENMLRMISEID+    ++E ++  + + +    VLEEEKQQFQQAAYTVLDMLNN  GTL
Subjt:  MATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL
A0A6J1FEZ1 uncharacterized protein LOC1114434689.97e-3265.71Show/hide
Query:  MATSESKPDDRSISLPESES--------QLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKP+D+ I LPESES        QLSVL++ ISQQAQGAMENMLRMISEID+    +LE ++  + + +    VLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPDDRSISLPESES--------QLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL
A0A6J1IGC1 uncharacterized protein LOC1114766762.01e-3165.71Show/hide
Query:  MATSESKPDDRSISLPESES--------QLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNN
        MA+SESKP D+ I LPESES        QLSVL++ ISQQAQGAMENMLRMISEID+    +LE ++  + + +    VLEEEKQQFQQAAYTVLDMLNN
Subjt:  MATSESKPDDRSISLPESES--------QLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNN

Query:  GGGTL
        GGGTL
Subjt:  GGGTL
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT5G25570.1 unknown protein5.6e-1343.43Show/hide
Query:  MATSESKPDDRSISL----PESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGG
        MA S S+ D + ++      +++S L+ LV+++SQQ Q  MENML+M+ EID+    + E ++  K   +   R+LEEEK QFQ+AAYT+LDML+N  G
Subjt:  MATSESKPDDRSISL----PESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGG
AT5G25570.2 unknown protein5.6e-1343.43Show/hide
Query:  MATSESKPDDRSISL----PESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGG
        MA S S+ D + ++      +++S L+ LV+++SQQ Q  MENML+M+ EID+    + E ++  K   +   R+LEEEK QFQ+AAYT+LDML+N  G
Subjt:  MATSESKPDDRSISL----PESESQLSVLVYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGG
AT5G25570.3 unknown protein6.8e-1148.57Show/hide
Query:  VYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGG
        + ++SQQ Q  MENML+M+ EID+    + E ++  K   +   R+LEEEK QFQ+AAYT+LDML+N  G
Subjt:  VYDISQQAQGAMENMLRMISEIDRT---LLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGG

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATGGAACTCCTTCGTTCATCTTGTTCCGGCATCTCTGCGATGGCGACTTCCGAATCAAAACCCGACGATCGGTCTATTTCGTTGCCGGAATCTGAATCGCAGCTCTC
AGTTCTGGTCTACGATATATCACAACAGGCCCAAGGTGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCGAACACTGCTGGAATATTTGAAGACATGGAAAA
GTGCAGGCGTTCTGCTCTCGAGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGAACGCTGTAA
mRNA sequenceShow/hide mRNA sequence
CCCGCGCAAACGATGATGGAACTCCTTCGTTCATCTTGTTCCGGCATCTCTGCGATGGCGACTTCCGAATCAAAACCCGACGATCGGTCTATTTCGTTGCCGGAATCTGA
ATCGCAGCTCTCAGTTCTGGTCTACGATATATCACAACAGGCCCAAGGTGCTATGGAGAACATGCTTAGAATGATCAGTGAAATTGATCGAACACTGCTGGAATATTTGA
AGACATGGAAAAGTGCAGGCGTTCTGCTCTCGAGAGTCCTAGAGGAAGAGAAACAACAATTTCAACAAGCTGCTTACACTGTTTTAGACATGCTCAACAACGGAGGGGGA
ACGCTGTAAGATTTCTCTCAAAGTTTCTGCACATTTCAGCCAATACGTATCCCTTTTATGTATGTACACCGTGACTCATCACTTGTTTCTTGATAGTCGAATACCACGTC
ATCATTTAGGCCTTGGGTCATGTAAAAACCAAGCAGATATGAATTTTGTCTTCAAACAAAGAATAAATGATCACCCTCTCTTAAAACATTCAAGTCCTCTATTTTAGAGC
CATCAGCCATGAGAATTGAGCTCCCTCTCTTGCCAAATCTTT
Protein sequenceShow/hide protein sequence
MMELLRSSCSGISAMATSESKPDDRSISLPESESQLSVLVYDISQQAQGAMENMLRMISEIDRTLLEYLKTWKSAGVLLSRVLEEEKQQFQQAAYTVLDMLNNGGGTL