; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG03g02230 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG03g02230
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptionmitochondrial import inner membrane translocase subunit Tim9
Genome locationCp4.1LG03:604202..606611
RNA-Seq ExpressionCp4.1LG03g02230
SyntenyCp4.1LG03g02230
Gene Ontology termsNA
InterPro domainsIPR004217 - Tim10-like
IPR035427 - Tim10-like domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON38573.1 Tim10/DDP family zinc finger [Parasponia andersonii]1.02e-5492.47Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK MLADL+ LPEEDKL+M+TMIDQLQIRDSLRMYNSLVERCF DCID FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_004137789.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucumis sativus]4.47e-5896.77Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022145535.1 mitochondrial import inner membrane translocase subunit Tim9-like [Momordica charantia]1.50e-5694.62Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+MLADL+GLP+EDKLKMA+MIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_022934857.1 mitochondrial import inner membrane translocase subunit Tim9 [Cucurbita moschata]1.89e-59100Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

XP_042940042.1 mitochondrial import inner membrane translocase subunit Tim9 [Carya illinoinensis]1.19e-5389.25Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+MLADLE LPEEDK++M+TMI+QLQIRDSLRMYNSLVERCF DC+D FQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAAT+D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

TrEMBL top hitse value%identityAlignment
A0A0A0LFK3 zf-Tim10_DDP domain-containing protein2.16e-5896.77Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A1S3B5G6 mitochondrial import inner membrane translocase subunit Tim92.16e-5896.77Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A5D3DN53 Mitochondrial import inner membrane translocase subunit Tim92.16e-5896.77Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADL+GLPEEDK+KMATMIDQLQIRDSLRMYNSLVERCF DCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1F3Y8 mitochondrial import inner membrane translocase subunit Tim99.15e-60100Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

A0A6J1IZ98 mitochondrial import inner membrane translocase subunit Tim99.15e-60100Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

SwissProt top hitse value%identityAlignment
P57745 Mitochondrial import inner membrane translocase subunit Tim99.1e-1746.15Show/hide
Query:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ + + +I+  Q++D +R+Y++LVERCF DC+++F    LT +E+TC+ RC+EKFLKHS RVG+RF E N
Subjt:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q757S0 Mitochondrial import inner membrane translocase subunit TIM97.0e-1746.15Show/hide
Query:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN
        ++ L   ++ +   +++Q Q++D +R+Y++LVERCF+DC+++F    LT +E+TC+ RC+EKFLKHS RVG RF E N
Subjt:  LEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELN

Q9XGX7 Mitochondrial import inner membrane translocase subunit Tim97.7e-4082.8Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDK+ML DL+GLPEEDK++MA M+DQLQIRDSLRMYNSLVERCF DC+D F+RK+L KQEE+CVRRCAEKFLKHSMRVGMRFAELNQG AT D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX8 Mitochondrial import inner membrane translocase subunit Tim92.6e-4083.87Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MDKNML DL+ LPEEDKLKMA+MI+QLQIRDSLRMYN+LVERCF DC+D+F+RK+L KQEETCV+RCAEKFLKHSMRVG+RFAELNQGAAT+D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Q9XGX9 Mitochondrial import inner membrane translocase subunit TIM91.6e-3780.65Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD +M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD

Arabidopsis top hitse value%identityAlignment
AT3G46560.1 Tim10/DDP family zinc finger protein1.1e-3880.65Show/hide
Query:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD
        MD +M+A L+GLPEEDK KMA+MIDQLQ+RDSLRMYNSLVERCF DC+D+F RKSL KQEETCV RCAEKFLKH+MRVGMRFAELNQ A T D
Subjt:  MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACAAGAACATGCTTGCTGATTTGGAGGGTCTTCCTGAAGAAGACAAGCTCAAAATGGCCACCATGATCGACCAGCTCCAGATTCGAGACAGTCTGAGAATG
TACAACTCATTGGTCGAGAGATGCTTTGCGGATTGCATAGACAACTTTCAGCGAAAGTCCCTAACGAAGCAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAG
TTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTGCTGAGCTCAACCAAGGAGCCGCTACCTCAGATTAG
mRNA sequenceShow/hide mRNA sequence
TAGGGGCTGAAATGGAAAATATACGAACATTGAAGGACCATTTAGCAAAAAAACTATTACGCTCTCTCCAACTTATAATTCCAACCTAGCTGAGCTGATAGCGGC
GATACAGAGAAGGGAGAAGAAACCAGAGAAGTTGAACCCTAAACCCTTTGCTTTCTTTGGAATCGAAGATGGACAAGAACATGCTTGCTGATTTGGAGGGTCTTC
CTGAAGAAGACAAGCTCAAAATGGCCACCATGATCGACCAGCTCCAGATTCGAGACAGTCTGAGAATGTACAACTCATTGGTCGAGAGATGCTTTGCGGATTGCA
TAGACAACTTTCAGCGAAAGTCCCTAACGAAGCAAGAGGAAACATGTGTACGTAGGTGTGCCGAGAAGTTCTTGAAGCACTCAATGCGCGTTGGAATGAGATTTG
CTGAGCTCAACCAAGGAGCCGCTACCTCAGATTAGTGTAGCATCAGAGGACACCCAGACATATTCTTGAGACCTTCAGTTCTTTCACCTCTGGAATTATAGTATG
TTTCTTCCATATTCTTGAAACCTTCAGTGCTTTCACCTCTGGATTTATAATAGCACGTCTTCCATAAATGTTGCAACTGGGATTAAGTGGTGATTTGATTTGACT
TATATATTAAAGTTTTAGTAGCAGACTTTCAATAAATGTTTGAGATTTGATATCCATTAGGATGATTTAACTTAGTTTTTTGCTTATTGCTGGTAATATGGCCTT
TTCTTCAACTTCATAACCAATTTGATAGAAAAATGATTGGAGATCAAATCTTGAACAGTTAGATGAACTGCAATTGGTTGGGTTTGTTTGGCAGAGCCTTCTGAT
GAACGCACTTCATTCTTCATCTAATCTAAGCATCTCATGCTTGGG
Protein sequenceShow/hide protein sequence
MDKNMLADLEGLPEEDKLKMATMIDQLQIRDSLRMYNSLVERCFADCIDNFQRKSLTKQEETCVRRCAEKFLKHSMRVGMRFAELNQGAATSD