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Cp4.1LG03g03680 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG03g03680
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptiondehydration-responsive element-binding protein 2F
Genome locationCp4.1LG03:2164443..2165173
RNA-Seq ExpressionCp4.1LG03g03680
SyntenyCp4.1LG03g03680
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6580829.1 Dehydration-responsive element-binding protein 2F, partial [Cucurbita argyrosperma subsp. sororia]4.55e-10690.91Show/hide
Query:  FVSMFPHPRPA-TFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEE
        FVSMFPHPRPA TFMLNL AQPSLNLIHQRLQQL TPH FLSPSLPSPS+KLKDESKNEKEDEASLGEE TTVTR+MVEEKPQIDLNEFLQQLGIIKE E
Subjt:  FVSMFPHPRPA-TFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEE

Query:  EEKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSFWDFEEHHSMTIIP
         EKSVIESE EE ISNNKEAESNNCLKDD S+EVEVVSDKSFNWDSIME+HPNIEHH F NFQVYDRYEDDLSFWDFEEH SMTIIP
Subjt:  EEKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSFWDFEEHHSMTIIP

KAG7017584.1 Dehydration-responsive element-binding protein 2F, partial [Cucurbita argyrosperma subsp. argyrosperma]3.72e-10590.37Show/hide
Query:  FVSMFPHPRPA-TFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEE
        FVSMFPHPRPA TFMLNL AQPSLNLIHQRLQQL TPH FLSPSLPSPS+KLKDESKNEKEDEASLGEE TTVTR+MVEEKPQIDLNEFLQQLGIIKE E
Subjt:  FVSMFPHPRPA-TFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEE

Query:  EEKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSFWDFEEHHSMTIIP
         EKSVIESE EE ISNNKEAESNNCLKDD S+EVEVVSDKSFNWDSIME+HPNIEHH F NFQVYDRYEDDLSFWDFEE+ SMTIIP
Subjt:  EEKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSFWDFEEHHSMTIIP

XP_022983040.1 dehydration-responsive element-binding protein 2F [Cucurbita maxima]5.83e-10587.89Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE
        FVS+FP+PRPATFMLNLNAQPSLNLIHQRLQQL T HGFLSPSLPSPSKKL+DE+KN KEDEASLGEETTTVT DMVE+KPQIDLNEFLQQLGIIKEE E
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE

Query:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSF----WDFEEHHSMTIIP
        EKSVIESE EEGI+NNKEAE NNCLKDDPS+EVEVVSD+SFNWDSIMEMH NIEHH F NFQVY+RYEDDLSF    WDFEEHHSMTIIP
Subjt:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSF----WDFEEHHSMTIIP

XP_023538900.1 dehydration-responsive element-binding protein 2F-like [Cucurbita pepo subsp. pepo]2.11e-5861.65Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKD--ESKNEKEDEASLGEE--TTTVTRDMVEEKPQIDLNEFLQQLGIIK
        F+SMFPH RPA FMLNLNAQPS++LIHQRLQQL T  GFL+PS     KK++D  E++ EK+DEA + +E  TTT T   VEEKPQIDLNEFLQQLGI+K
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKD--ESKNEKEDEASLGEE--TTTVTRDMVEEKPQIDLNEFLQQLGIIK

Query:  EEEEEKSVIESEREEGISN---NKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIE------HHQFENFQVYD---RYEDDLSF----WDFEEHH
        E EEEK +  SE EEG        E+ SNN LKD  S+E+EV+SDKSFNWDSIM++H NIE      HHQ  NF+VYD    YEDDLSF    WDF+E H
Subjt:  EEEEEKSVIESEREEGISN---NKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIE------HHQFENFQVYD---RYEDDLSF----WDFEEHH

Query:  SMTIIP
        S  IIP
Subjt:  SMTIIP

XP_038905734.1 dehydration-responsive element-binding protein 2F [Benincasa hispida]1.60e-6663.81Show/hide
Query:  FVSMFPHPR------PATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSP-SLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLG
        F+S+FP+P       P +FMLNLNAQPSL+LIHQRLQQL TP  FLSP SL SPSKKL++E + EK+D+ +L  E TT  RD+ EEKPQIDLNEFLQQLG
Subjt:  FVSMFPHPR------PATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSP-SLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLG

Query:  IIKEEEEEKSVIESEREEGISNNKE-----------AESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRY---EDDLSF----WD
        I+KEEEEEK VIE E EEG +NN             +ESNNC   D S+EVEV+SDKSFNWDSIMEM+PNIE H F NFQVYD Y   EDDLSF    WD
Subjt:  IIKEEEEEKSVIESEREEGISNNKE-----------AESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRY---EDDLSF----WD

Query:  FEEHHSMTII
        FEE  S  II
Subjt:  FEEHHSMTII

TrEMBL top hitse value%identityAlignment
A0A1S3B811 dehydration-responsive element-binding protein 2F1.71e-5557.94Show/hide
Query:  FVSMFPHP-RPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSP-SLPSPSKKLKDESKNEKEDEASLGEETTT---VTRDMVEE-KPQIDLNEFLQQLGI
        F+S+FPH  R A  +    +  SL+LIHQRLQQL  PH FLS  SL SPSKKL+D+ + EK++EAS+ EETTT    TR + EE KPQIDLNEFLQQLGI
Subjt:  FVSMFPHP-RPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSP-SLPSPSKKLKDESKNEKEDEASLGEETTT---VTRDMVEE-KPQIDLNEFLQQLGI

Query:  IKEEEEEKSVIESEREEGISNNKEAE---------------SNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDR----YEDDLSF--
        +KEEE+EK  IE E E+G  NNK+ +               SNNC   D S+EVEV+SDKSFNWDSIME+HPNIE + F NFQ+YD     YEDDLSF  
Subjt:  IKEEEEEKSVIESEREEGISNNKEAE---------------SNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDR----YEDDLSF--

Query:  --WDFEEHHSMTII
          WDFEE HS  II
Subjt:  --WDFEEHHSMTII

A0A5D3DQ97 Dehydration-responsive element-binding protein 2F1.71e-5557.94Show/hide
Query:  FVSMFPHP-RPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSP-SLPSPSKKLKDESKNEKEDEASLGEETTT---VTRDMVEE-KPQIDLNEFLQQLGI
        F+S+FPH  R A  +    +  SL+LIHQRLQQL  PH FLS  SL SPSKKL+D+ + EK++EAS+ EETTT    TR + EE KPQIDLNEFLQQLGI
Subjt:  FVSMFPHP-RPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSP-SLPSPSKKLKDESKNEKEDEASLGEETTT---VTRDMVEE-KPQIDLNEFLQQLGI

Query:  IKEEEEEKSVIESEREEGISNNKEAE---------------SNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDR----YEDDLSF--
        +KEEE+EK  IE E E+G  NNK+ +               SNNC   D S+EVEV+SDKSFNWDSIME+HPNIE + F NFQ+YD     YEDDLSF  
Subjt:  IKEEEEEKSVIESEREEGISNNKEAE---------------SNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDR----YEDDLSF--

Query:  --WDFEEHHSMTII
          WDFEE HS  II
Subjt:  --WDFEEHHSMTII

A0A6J1FV94 dehydration-responsive element-binding protein 2F6.26e-5559.05Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKD--ESKNEKEDEASLGEE------TTTVTRDMVEEKPQIDLNEFLQQL
        F+SMFPH RPA FMLNLNAQPS++LIHQRLQQL T  GFLSPS     KK++D  E++ EK+DEA + +E      TT  T   VEEKPQIDLNEFLQQL
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKD--ESKNEKEDEASLGEE------TTTVTRDMVEEKPQIDLNEFLQQL

Query:  GIIKEEEEEKSVIESEREEGISN---NKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIE------HHQFENFQVYD---RYEDDLSF----WDF
        GI+KE   EK +  SE EEG        E+ SNN LKD  S+E+EV+SDKSFNWDSIM+++ NIE      HHQ  NF+VYD    YEDDLSF    WDF
Subjt:  GIIKEEEEEKSVIESEREEGISN---NKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIE------HHQFENFQVYD---RYEDDLSF----WDF

Query:  EEHHSMTIIP
        +E HS  IIP
Subjt:  EEHHSMTIIP

A0A6J1I3D8 dehydration-responsive element-binding protein 2F-like4.90e-5760.58Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKD--ESKNEKEDEASLGEE----TTTVTRDMVEEKPQIDLNEFLQQLGI
        F+SMFPH RPA FMLNLNAQPS++LIHQRLQQL T  GFLSPS     KK++D  E++ EK+DEA + ++    TTT T   VEEKPQIDLNEFLQQLGI
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKD--ESKNEKEDEASLGEE----TTTVTRDMVEEKPQIDLNEFLQQLGI

Query:  IKEEEEEKSVIESEREEGISN---NKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIE------HHQFENFQVYD---RYEDDLSF----WDFEE
        +K  EEEK +  SE EEG        E+ SNN LKD  S+E+EV+SDKSFNWDSIM++H NIE      HHQ  NF+VYD    YEDDLSF    WDF+E
Subjt:  IKEEEEEKSVIESEREEGISN---NKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIE------HHQFENFQVYD---RYEDDLSF----WDFEE

Query:  HHSMTIIP
         HS  IIP
Subjt:  HHSMTIIP

A0A6J1J4K5 dehydration-responsive element-binding protein 2F2.82e-10587.89Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE
        FVS+FP+PRPATFMLNLNAQPSLNLIHQRLQQL T HGFLSPSLPSPSKKL+DE+KN KEDEASLGEETTTVT DMVE+KPQIDLNEFLQQLGIIKEE E
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE

Query:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSF----WDFEEHHSMTIIP
        EKSVIESE EEGI+NNKEAE NNCLKDDPS+EVEVVSD+SFNWDSIMEMH NIEHH F NFQVY+RYEDDLSF    WDFEEHHSMTIIP
Subjt:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSF----WDFEEHHSMTIIP

SwissProt top hitse value%identityAlignment
Q9SVX5 Dehydration-responsive element-binding protein 2F2.7e-1235.71Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE
        F+SMF    P+  MLN+NAQPS+++I QRL++L    G LS S  S S   + ++     DE +   ET  +     ++KP+IDL EFLQQLGI+K+E E
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE

Query:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEM-HPNIEHHQFE--NFQVYDRYEDDLSF---WDF
         +    +E       N++ E+ +  + +           +F+WD+++EM        QF+  NF  YD +EDD+SF   WD+
Subjt:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEM-HPNIEHHQFE--NFQVYDRYEDDLSF---WDF

Arabidopsis top hitse value%identityAlignment
AT3G57600.1 Integrase-type DNA-binding superfamily protein1.9e-1335.71Show/hide
Query:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE
        F+SMF    P+  MLN+NAQPS+++I QRL++L    G LS S  S S   + ++     DE +   ET  +     ++KP+IDL EFLQQLGI+K+E E
Subjt:  FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEE

Query:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEM-HPNIEHHQFE--NFQVYDRYEDDLSF---WDF
         +    +E       N++ E+ +  + +           +F+WD+++EM        QF+  NF  YD +EDD+SF   WD+
Subjt:  EKSVIESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEM-HPNIEHHQFE--NFQVYDRYEDDLSF---WDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTCGTTTCTATGTTCCCTCATCCCCGCCCTGCAACCTTTATGCTTAATCTCAATGCTCAGCCTAGTCTTAATCTTATTCACCAGAGGCTTCAACAGCTTACAACT
CCTCATGGCTTTCTCTCCCCTTCCCTCCCTTCTCCTTCTAAGAAACTTAAAGACGAGAGTAAGAACGAGAAAGAAGACGAAGCTTCACTAGGAGAGGAGACAACG
ACGGTGACAAGGGATATGGTAGAAGAGAAGCCACAGATTGATCTAAACGAGTTTCTGCAACAGCTTGGGATTATCAAAGAAGAAGAAGAGGAGAAGTCAGTGATT
GAATCAGAAAGAGAGGAAGGCATTAGTAACAATAAGGAAGCAGAATCGAATAATTGTTTGAAAGACGATCCCAGTGAGGAAGTTGAAGTGGTTAGTGACAAAAGC
TTTAATTGGGATTCAATTATGGAAATGCATCCAAATATTGAACATCATCAATTCGAAAACTTTCAAGTTTATGATCGTTATGAAGATGATCTAAGTTTTTGGGAT
TTTGAAGAACACCATTCCATGACAATCATACCTTAA
mRNA sequenceShow/hide mRNA sequence
TTCGTTTCTATGTTCCCTCATCCCCGCCCTGCAACCTTTATGCTTAATCTCAATGCTCAGCCTAGTCTTAATCTTATTCACCAGAGGCTTCAACAGCTTACAACT
CCTCATGGCTTTCTCTCCCCTTCCCTCCCTTCTCCTTCTAAGAAACTTAAAGACGAGAGTAAGAACGAGAAAGAAGACGAAGCTTCACTAGGAGAGGAGACAACG
ACGGTGACAAGGGATATGGTAGAAGAGAAGCCACAGATTGATCTAAACGAGTTTCTGCAACAGCTTGGGATTATCAAAGAAGAAGAAGAGGAGAAGTCAGTGATT
GAATCAGAAAGAGAGGAAGGCATTAGTAACAATAAGGAAGCAGAATCGAATAATTGTTTGAAAGACGATCCCAGTGAGGAAGTTGAAGTGGTTAGTGACAAAAGC
TTTAATTGGGATTCAATTATGGAAATGCATCCAAATATTGAACATCATCAATTCGAAAACTTTCAAGTTTATGATCGTTATGAAGATGATCTAAGTTTTTGGGAT
TTTGAAGAACACCATTCCATGACAATCATACCTTAA
Protein sequenceShow/hide protein sequence
FVSMFPHPRPATFMLNLNAQPSLNLIHQRLQQLTTPHGFLSPSLPSPSKKLKDESKNEKEDEASLGEETTTVTRDMVEEKPQIDLNEFLQQLGIIKEEEEEKSVI
ESEREEGISNNKEAESNNCLKDDPSEEVEVVSDKSFNWDSIMEMHPNIEHHQFENFQVYDRYEDDLSFWDFEEHHSMTIIP