; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG03g04460 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG03g04460
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptionras-related protein RGP1-like
Genome locationCp4.1LG03:5549634..5552736
RNA-Seq ExpressionCp4.1LG03g04460
SyntenyCp4.1LG03g04460
Gene Ontology termsGO:0005768 - endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0003924 - GTPase activity (molecular function)
GO:0005525 - GTP binding (molecular function)
InterPro domainsIPR001806 - Small GTPase
IPR005225 - Small GTP-binding protein domain
IPR027417 - P-loop containing nucleoside triphosphate hydrolase


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022934894.1 ras-related protein RGP1-like [Cucurbita moschata]2.43e-14194.62Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +GVKIVVPGQEPQPAT+AGCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

XP_022983954.1 ras-related protein RGP1-like [Cucurbita maxima]3.45e-14195.07Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        EGVKIVVPGQEPQPATSA CCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

XP_022998498.1 ras-related protein RABA4c-like [Cucurbita maxima]5.17e-12987.44Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF+RN FSLDSKATIGVEFQTKTLVID+KAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        Q+FDHITRWL+ELR HADKNIVIMLIGNKSDL SLR+VPTEDAKEFAQME+LFFMETSALEATNVEAAFNTILTEIYRV+SRK LIANE+TD+ GS+SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +G KIVVPGQEPQPATS GCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

XP_023521547.1 ras-related protein RGP1-like [Cucurbita pepo subsp. pepo]2.08e-14295.52Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        EGVKIVVPGQEPQPATSAGCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

XP_023525670.1 ras-related protein RABA4c-like [Cucurbita pepo subsp. pepo]1.42e-12686.1Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF+RN FSLDSKATIGVEFQTKTLVID+KAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        Q+FDHI RWL+ELR HADKNIVIMLIGNKSDL SLR+VPTEDAKEF+QME+LFFMETSALEATNVEAAFNTILTEIYRV+SRK LIANE+TD+ GS+SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +G KIVVPGQEPQ ATS GCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

TrEMBL top hitse value%identityAlignment
A0A1S3CFD0 ras-related protein RABA4c isoform X13.96e-12685.2Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF+RN FSLDSKATIGVEFQTKTL ID+KAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDHI RWL+ELRGHADKNIVIMLIGNKSDL SLR+VPTEDAKEFAQME+LFFMETSALEATNVEAAFNTILTEIYRV+S+K L+AN++TD+ GS+SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +G KIVVPGQEPQ A S+GCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

A0A6J1F3V5 ras-related protein RGP1-like1.18e-14194.62Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +GVKIVVPGQEPQPAT+AGCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

A0A6J1GBR1 ras-related protein RABA4c-like6.86e-12786.1Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF+RN FSLDSKATIGVEFQTKTLVID+KAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        Q+FDHI RWL+ELR HADKNIVIMLIGNKSDL SLR+VPTEDAKEFAQME+LFFMETSALEATNVEAAFNTILTEIYRV+SRK LIANE+TD+ G++SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +G KIVVPGQEPQ ATS GCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

A0A6J1J922 ras-related protein RGP1-like1.67e-14195.07Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        EGVKIVVPGQEPQPATSA CCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

A0A6J1KGX4 ras-related protein RABA4c-like2.50e-12987.44Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR
        MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRF+RN FSLDSKATIGVEFQTKTLVID+KAIKAQIWDTAGQER          GAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQER----------GAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        Q+FDHITRWL+ELR HADKNIVIMLIGNKSDL SLR+VPTEDAKEFAQME+LFFMETSALEATNVEAAFNTILTEIYRV+SRK LIANE+TD+ GS+SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
        +G KIVVPGQEPQPATS GCCRS
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

SwissProt top hitse value%identityAlignment
P25766 Ras-related protein RGP11.4e-8776.17Show/hide
Query:  QKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITRW
        QKIDYVFKVVLIGDSAVGKSQLL+RF+RN F+LDSKATIGVEFQT+TL ID + +KAQIWDTAGQE          RGAVGAMLVYD+TKRQSFDH+ RW
Subjt:  QKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITRW

Query:  LDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPG
        L+ELRGHADKNIVIMLIGNKSDL +LR+VPTEDAKEFA+ E+LFFMETSALE+TNVE AF T+LTEIYR+VS+K L+ANE+ D+ G++SLL+G KIVVPG
Subjt:  LDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPG

Query:  QEPQPATSAGCCRS
        QEP P T A CC S
Subjt:  QEPQPATSAGCCRS

Q40191 Ras-related protein Rab11A6.1e-7568.98Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITR
        N KIDYVFKVVLIGDSAVGKSQ+L+RF+RN FSLDSK+TIGVEFQT+TLVID K +KAQIWDTAGQE          RGAVGAMLVYD+TKRQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITR

Query:  WLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVP
        WL+ELR HADKNIVI+LIGNK DL + R VPTEDAKEFA+ E LFF+ETSALEATNVE+AF T+LTEIY +V++K+L A+E      SAS L G KI++P
Subjt:  WLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVP

Query:  GQEPQ-PATSAGCCRS
        G   + PA    CC++
Subjt:  GQEPQ-PATSAGCCRS

Q40522 Ras-related protein Rab11D1.2e-7365.02Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR
        M++   + +QKIDYVFKVVLIGDSAVGKSQ+L+RF+RN FSLDSKATIGVEFQT+TL I  K++KAQIWDTAGQE          RGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        Q+FDHI RWL+ELR HAD+NIVIMLIGNK+DL+  R VPTEDAKEFAQ E LFF+ETSA+EATN+E AF T+LTEI+ +V++K L A +D  ++G+ + L
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCCRS
         G KI+VPG          CC S
Subjt:  EGVKIVVPGQEPQPATSAGCCRS

Q9FE79 Ras-related protein RABA4c1.3e-8573.3Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR
        MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RFSRN FS++SKATIGVEFQT+TL ID+K IKAQIWDTAGQE          RGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDH+ RWL+ELRGHADKNIVIMLIGNK+DL +LR VPTEDAKEFAQ E+LFFMETSAL++ NVE +F T+LTEIYR+VS+K L+ANE+ ++ G +SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCC
        +G KIVV G+E + +   GCC
Subjt:  EGVKIVVPGQEPQPATSAGCC

Q9LH50 Ras-related protein RABA4d1.1e-8473.3Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RF+RN FS+DSKATIGVEFQTKTLVID K +KAQIWDTAGQE          RGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDH+ +WL+ELRGHADKNIVIMLIGNK DL SLR VPTEDA+EFAQ E+LFFMETSALEATNVE AF TILTEIYR++S+K+L A++D D DG++SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCC
        +G +I++P  E +     GCC
Subjt:  EGVKIVVPGQEPQPATSAGCC

Arabidopsis top hitse value%identityAlignment
AT1G16920.1 RAB GTPase homolog A1B1.0e-6159.33Show/hide
Query:  DYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITRWLDE
        DY+FKVVLIGDS VGKS LLSRF++N F+L+SK+TIGVEF T+TL +D K +KAQIWDTAGQE          RGAVGA+LVYD+T+R +F+++ RWL E
Subjt:  DYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITRWLDE

Query:  LRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPGQEP
        L+ H D NIV+ML+GNKSDL  L  VPTED K +A+ ESL FMETSALEATNVE AF  +LT+IYR+ S+K + A E    DG+AS+ +G KI V   + 
Subjt:  LRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPGQEP

Query:  QPATSAGCC
              GCC
Subjt:  QPATSAGCC

AT3G12160.1 RAB GTPase homolog A4D7.9e-8673.3Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR
        MSNL  ++NQKIDYVFKVVLIGDSAVGK+QLL+RF+RN FS+DSKATIGVEFQTKTLVID K +KAQIWDTAGQE          RGAVGAMLVYDMTKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDH+ +WL+ELRGHADKNIVIMLIGNK DL SLR VPTEDA+EFAQ E+LFFMETSALEATNVE AF TILTEIYR++S+K+L A++D D DG++SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCC
        +G +I++P  E +     GCC
Subjt:  EGVKIVVPGQEPQPATSAGCC

AT4G39990.1 RAB GTPase homolog A4B1.5e-7366.36Show/hide
Query:  KIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITRWL
        K+DYVFKVVLIGDSAVGKSQLL+RF+R+ FS+DSKATIGVEFQT+TL I++K+IKAQIWDTAGQE          RGAVGAMLVYDMTKR++F+HI RWL
Subjt:  KIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITRWL

Query:  DELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPGQ
        +ELR HADKNIVI+LIGNKSDL+  R VPTEDAKEFA+ E LFF+ETSAL ATNVE +FNT++T+IY  V++K L +  D++  GS   L G KI++PG 
Subjt:  DELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPGQ

Query:  EPQ-PATSAGCCRS
          + PA ++ CC S
Subjt:  EPQ-PATSAGCCRS

AT5G47960.1 RAB GTPase homolog A4C9.3e-8773.3Show/hide
Query:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR
        MS  QSNFNQKIDYVFKVVLIGDSAVGKSQLL+RFSRN FS++SKATIGVEFQT+TL ID+K IKAQIWDTAGQE          RGAVGAMLVYD+TKR
Subjt:  MSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKR

Query:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL
        QSFDH+ RWL+ELRGHADKNIVIMLIGNK+DL +LR VPTEDAKEFAQ E+LFFMETSAL++ NVE +F T+LTEIYR+VS+K L+ANE+ ++ G +SLL
Subjt:  QSFDHITRWLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLL

Query:  EGVKIVVPGQEPQPATSAGCC
        +G KIVV G+E + +   GCC
Subjt:  EGVKIVVPGQEPQPATSAGCC

AT5G65270.1 RAB GTPase homolog A4A2.0e-7366.82Show/hide
Query:  NQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITR
        +QKIDYVFKVVLIGDSAVGKSQ+L+R++R+ FSLDSKATIGVEFQT+TLVID K++KAQIWDTAGQE          RGAVGAMLVYD+T+RQ+FDHI R
Subjt:  NQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQE----------RGAVGAMLVYDMTKRQSFDHITR

Query:  WLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKI-VV
        WL+ELR HADKNIVI+LIGNKSDL   R +PTEDAKEFA+ E LFF+ETSA  ATNVE+AF+T+LTEI+ +V++K+L A+ED + +G+   L G KI +V
Subjt:  WLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKI-VV

Query:  PGQ-EPQPATSAGCCRS
        PG  +  P  S  CC S
Subjt:  PGQ-EPQPATSAGCCRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGACATTGGTTTCTTATTTTCCCGTAAGAGCGATGTCTAATCTGCAATCGAATTTCAATCAGAAGATCGATTATGTATTCAAGGTCGTGTTGATTGGGGATTCTGC
GGTGGGGAAGTCGCAACTTCTTTCTCGTTTTTCTAGGAATATGTTTAGTTTGGATTCGAAGGCTACGATTGGGGTTGAGTTTCAGACAAAGACGCTCGTCATTGACAAGA
AAGCTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAGAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACAAAACGTCAGTCGTTCGATCATATAACTAGA
TGGTTAGATGAACTGCGTGGGCACGCAGACAAGAACATCGTTATCATGCTTATAGGGAACAAGTCTGATCTAGATTCTCTTCGTCTTGTGCCCACAGAAGATGCTAAAGA
GTTCGCTCAAATGGAGAGCCTGTTTTTCATGGAAACATCAGCTCTGGAGGCAACTAACGTAGAGGCAGCATTCAATACCATACTGACAGAAATTTACCGAGTGGTTAGCA
GGAAGACACTGATTGCAAATGAGGATACTGATACCGACGGAAGCGCATCACTCCTCGAAGGAGTCAAAATTGTTGTCCCTGGACAAGAGCCTCAGCCTGCAACCTCTGCT
GGCTGTTGCAGGAGTTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGACATTGGTTTCTTATTTTCCCGTAAGAGCGATGTCTAATCTGCAATCGAATTTCAATCAGAAGATCGATTATGTATTCAAGGTCGTGTTGATTGGGGATTCTGC
GGTGGGGAAGTCGCAACTTCTTTCTCGTTTTTCTAGGAATATGTTTAGTTTGGATTCGAAGGCTACGATTGGGGTTGAGTTTCAGACAAAGACGCTCGTCATTGACAAGA
AAGCTATCAAGGCGCAGATATGGGATACTGCTGGACAGGAGAGAGGTGCTGTGGGGGCAATGCTGGTCTACGACATGACAAAACGTCAGTCGTTCGATCATATAACTAGA
TGGTTAGATGAACTGCGTGGGCACGCAGACAAGAACATCGTTATCATGCTTATAGGGAACAAGTCTGATCTAGATTCTCTTCGTCTTGTGCCCACAGAAGATGCTAAAGA
GTTCGCTCAAATGGAGAGCCTGTTTTTCATGGAAACATCAGCTCTGGAGGCAACTAACGTAGAGGCAGCATTCAATACCATACTGACAGAAATTTACCGAGTGGTTAGCA
GGAAGACACTGATTGCAAATGAGGATACTGATACCGACGGAAGCGCATCACTCCTCGAAGGAGTCAAAATTGTTGTCCCTGGACAAGAGCCTCAGCCTGCAACCTCTGCT
GGCTGTTGCAGGAGTTGA
Protein sequenceShow/hide protein sequence
MLTLVSYFPVRAMSNLQSNFNQKIDYVFKVVLIGDSAVGKSQLLSRFSRNMFSLDSKATIGVEFQTKTLVIDKKAIKAQIWDTAGQERGAVGAMLVYDMTKRQSFDHITR
WLDELRGHADKNIVIMLIGNKSDLDSLRLVPTEDAKEFAQMESLFFMETSALEATNVEAAFNTILTEIYRVVSRKTLIANEDTDTDGSASLLEGVKIVVPGQEPQPATSA
GCCRS