; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG03g04480 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG03g04480
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptionarabinogalactan peptide 23-like
Genome locationCp4.1LG03:5519143..5519328
RNA-Seq ExpressionCp4.1LG03g04480
SyntenyCp4.1LG03g04480
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7018086.1 hypothetical protein SDJN02_19952, partial [Cucurbita argyrosperma subsp. argyrosperma]1.57e-2798.33Show/hide
Query:  EMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
         MKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
Subjt:  EMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
KAG7019275.1 Arabinogalactan peptide 23, partial [Cucurbita argyrosperma subsp. argyrosperma]2.13e-2690.16Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEMKKI CA+LFAAATVSAVVAHDEA APAPGP+SGA AGLPAIGS+IGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
XP_022983304.1 arabinogalactan peptide 23-like [Cucurbita maxima]7.71e-2998.36Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGS IGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
XP_022998512.1 arabinogalactan peptide 23-like [Cucurbita maxima]5.05e-2586.89Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEM KI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGS+IGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
XP_038905644.1 arabinogalactan protein 23-like [Benincasa hispida]4.47e-2896.72Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEMKKIACAVLFAAATVSA VAHDEALAPAPGPSSGAA GLPAIGSVIGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
TrEMBL top hitse value%identityAlignment
A0A0A0L9U8 Uncharacterized protein1.14e-2386.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MEMKKIACAVLFAAATV+AVVA DEALAPAPGPSSGA  G+PAIGS++GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
A0A5A7U280 Arabinogalactan peptide 233.96e-2486.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MEMKKIACA+LFAAATVSA VA D+ALAPAPGPSSGAA GLPAIGS++GASLLS AAYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
A0A6J1HQG2 arabinogalactan peptide 23-like3.92e-2281.97Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEMKKI CAVLFAAATV+A VA +EA APAPGP+S A  GLPAIGS+IGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
A0A6J1J6Y9 arabinogalactan peptide 23-like3.73e-2998.36Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGS IGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
A0A6J1K873 arabinogalactan peptide 23-like2.44e-2586.89Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
        MEM KI CA+LFAAATVSAVVAHDEA APAPGP+SGA  GLPAIGS+IGASLLSVAAYYLQ
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ
SwissProt top hitse value%identityAlignment
Q8S2W4 Arabinogalactan protein 231.5e-1266.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MEMKKIAC VLFAAA+++AV+A +E  APAPGP+S A+A LPA+GS++GASL+S+ +YYL
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
Arabidopsis top hitse value%identityAlignment
AT2G41905.1 BEST Arabidopsis thaliana protein match is: arabinogalactan protein 23 (TAIR:AT3G57690.1)1.5e-1063.93Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGP-SSGAAAGLPAIGSVIGASLLSVAAYYL
        MEMKKIAC V+FAAA+++AV+A  E  APAPGP +SGA+  +PA+GS++GASL+S+ AYYL
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGP-SSGAAAGLPAIGSVIGASLLSVAAYYL
AT3G57690.1 arabinogalactan protein 231.1e-1366.67Show/hide
Query:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL
        MEMKKIAC VLFAAA+++AV+A +E  APAPGP+S A+A LPA+GS++GASL+S+ +YYL
Subjt:  MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGACGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGTGC
CGCTGCCGGCCTTCCAGCAATCGGCTCTGTCATTGGCGCTTCGTTGCTCTCTGTCGCGGCCTACTACCTGCAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGATGAAGAAGATCGCCTGCGCCGTCCTCTTCGCTGCCGCAACCGTCAGCGCCGTCGTGGCTCACGACGAGGCGTTGGCTCCAGCACCTGGACCAAGCAGCGGTGC
CGCTGCCGGCCTTCCAGCAATCGGCTCTGTCATTGGCGCTTCGTTGCTCTCTGTCGCGGCCTACTACCTGCAATGA
Protein sequenceShow/hide protein sequence
MEMKKIACAVLFAAATVSAVVAHDEALAPAPGPSSGAAAGLPAIGSVIGASLLSVAAYYLQ