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Cp4.1LG04g03600 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG04g03600
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionThiF domain-containing protein
Genome locationCp4.1LG04:7148805..7149676
RNA-Seq ExpressionCp4.1LG04g03600
SyntenyCp4.1LG04g03600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589164.1 hypothetical protein SDJN03_17729, partial [Cucurbita argyrosperma subsp. sororia]1.56e-5796.91Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVSFWTLKLGDYVELLTELHIDFKLNST
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSPPTAPIDSALLQVSFWTLKLGDYVELLT+LHIDFKLNST
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVSFWTLKLGDYVELLTELHIDFKLNST
KAG7022864.1 hypothetical protein SDJN02_16600, partial [Cucurbita argyrosperma subsp. argyrosperma]1.12e-3795.83Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNL+SQIYSTRSSSLSPPTAPIDSALLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
XP_022930695.1 uncharacterized protein LOC111437092 [Cucurbita moschata]6.47e-3795.83Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSPPTAPIDSALLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
XP_022989505.1 uncharacterized protein LOC111486563 [Cucurbita maxima]7.91e-3897.22Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
XP_023530330.1 uncharacterized protein LOC111792933 [Cucurbita pepo subsp. pepo]1.37e-3898.61Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
TrEMBL top hitse value%identityAlignment
A0A6J1C424 uncharacterized protein LOC1110077341.29e-2983.33Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSR F RS  S SE+FHKYLKPGALAQIRNSRMIARFNRVNLVSQIYS RSS LSPP+AP+DS LLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
A0A6J1EXJ2 uncharacterized protein LOC1114370923.13e-3795.83Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLSPPTAPIDSALLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
A0A6J1GLZ8 uncharacterized protein LOC1114552011.45e-3087.5Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSR   RS  SHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSP TAPI S LLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
A0A6J1HVZ0 uncharacterized protein LOC1114683461.58e-2781.94Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSR   RS  SHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTR SSLS  T P+ S LLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
A0A6J1JMJ5 uncharacterized protein LOC1114865633.83e-3897.22Show/hide
Query:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
        MNRRSRAF RSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQV+
Subjt:  MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G26960.1 unknown protein5.8e-0429.21Show/hide
Query:  RAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVSFWTLKLGDYVELLTELHIDFKL
        +  SRS    ++ FH+Y+KPGALAQIRN    AR N       +  + S  + PP++  +S +      T+ +     LL++++  +++
Subjt:  RAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVSFWTLKLGDYVELLTELHIDFKL
AT5G54970.1 unknown protein5.2e-0546.67Show/hide
Query:  SRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSAL
        S+S    S+ FH+YLKPGALAQIRNSR+ AR +  +LVS+   +  S L  P +P ++++
Subjt:  SRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSAL

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCGAAGATCCAGAGCGTTTTCCCGATCGTCCAAATCTCACTCCGAGACGTTCCATAAGTATCTAAAGCCTGGTGCTCTAGCGCAAATTCGGAATTCCCGGATGAT
CGCTCGATTCAATCGCGTCAATTTGGTATCTCAGATCTACTCCACTCGTTCCTCATCGCTTTCGCCGCCGACTGCACCGATCGACTCCGCTTTGCTTCAGGTCTCATTTT
GGACCTTAAAGCTTGGGGATTATGTTGAACTTCTGACCGAACTTCACATTGACTTCAAACTGAACTCAACTCTAGTCTACGAC
mRNA sequenceShow/hide mRNA sequence
TCCACCACTTTTCCCGCCTGTCCCCGCTCAATCCTCCACCTCCCGCCCACCCCACACTCCATAAATCCCCAAACCCCAATCTCCAATTTTCCTCATCCCAATCCCCTTCT
TCCCTTCCAATTTCCGGCAACATGAATCGAAGATCCAGAGCGTTTTCCCGATCGTCCAAATCTCACTCCGAGACGTTCCATAAGTATCTAAAGCCTGGTGCTCTAGCGCA
AATTCGGAATTCCCGGATGATCGCTCGATTCAATCGCGTCAATTTGGTATCTCAGATCTACTCCACTCGTTCCTCATCGCTTTCGCCGCCGACTGCACCGATCGACTCCG
CTTTGCTTCAGGTCTCATTTTGGACCTTAAAGCTTGGGGATTATGTTGAACTTCTGACCGAACTTCACATTGACTTCAAACTGAACTCAACTCTAGTCTACGAC
Protein sequenceShow/hide protein sequence
MNRRSRAFSRSSKSHSETFHKYLKPGALAQIRNSRMIARFNRVNLVSQIYSTRSSSLSPPTAPIDSALLQVSFWTLKLGDYVELLTELHIDFKLNSTLVYD