; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG04g04410 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG04g04410
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionTubulin-tyrosine ligase
Genome locationCp4.1LG04:6604069..6606781
RNA-Seq ExpressionCp4.1LG04g04410
SyntenyCp4.1LG04g04410
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589072.1 hypothetical protein SDJN03_17637, partial [Cucurbita argyrosperma subsp. sororia]4.88e-14096.98Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFH+RGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQE SNDDNSDNTK EEIDH REVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ

KAG7022779.1 hypothetical protein SDJN02_16515, partial [Cucurbita argyrosperma subsp. argyrosperma]8.43e-14197.49Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFH+RGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTK EEIDH REVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ

XP_022928482.1 uncharacterized protein LOC111435277 [Cucurbita moschata]8.43e-14197.49Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFH+RGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDH REVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ

XP_022989470.1 uncharacterized protein LOC111486519 isoform X1 [Cucurbita maxima]6.70e-13390.64Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQN----RNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDI
        YLQKYNISDVFH+RGLPLSQNQDQN    RNWCRMY ENIHYAYIEGTLDRTTIDLYE QE +NDDNSD+TK+E+IDH +EVIKNDIFEDIVNVVDLKDI
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQN----RNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDI

Query:  ITQ
        ITQ
Subjt:  ITQ

XP_023529793.1 uncharacterized protein LOC111792510 [Cucurbita pepo subsp. pepo]5.29e-144100Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ

TrEMBL top hitse value%identityAlignment
A0A0A0K4Z6 Uncharacterized protein9.87e-7657.35Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        M++ L++S RKL +WFT+TFKPIMTHDELEPIMATLGFI LEP +N   ISWKSY YS A    KS+S +  PP PRLPYPR+DGLHIYTYRAFLDA+NF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNS------DNTKDEEIDHPREVIKNDIFEDIVNVVDLK
        YL+K++ISD+FH+RGLPL +N D+NR W RM  E  ++ Y EGTLD+TT+ LY F + +N +N         T DEE +    + ++   ED + +V LK
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNS------DNTKDEEIDHPREVIKNDIFEDIVNVVDLK

Query:  DIIT
        D+IT
Subjt:  DIIT

A0A6J1C2J2 uncharacterized protein LOC1110076747.25e-7957.77Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSIS-TTERPPVPRLPYPRVDGLHIYTYRAFLDAIN
        M++ L++S RKL +W+T+TFKPIMTH+ELEPIMATLGF+GLEP +N   ISWKSY YS A    KS++   E PP PRLP+PR+DGLHIYTYRAFLDA+N
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSIS-TTERPPVPRLPYPRVDGLHIYTYRAFLDAIN

Query:  FYLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNT-------KDEEIDHPREVIKNDIFEDIVNVVD
        FYL+K++ISD+FH+RGLPL +NQD+NR W RM  E  ++ Y EGTLD+TT++ Y F + +   NS+N        K E+ DH R +I+++  EDI+ +V 
Subjt:  FYLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNT-------KDEEIDHPREVIKNDIFEDIVNVVD

Query:  LKDIIT
        LKDIIT
Subjt:  LKDIIT

A0A6J1EK23 uncharacterized protein LOC1114352774.08e-14197.49Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVIN DEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPRVDGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ
        YLQKYNISDVFH+RGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDH REVIKNDIFEDIVNVVDLKDIITQ
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ

A0A6J1JK57 uncharacterized protein LOC111486519 isoform X23.48e-7694.69Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHV
        YLQKYNISDVFH+
Subjt:  YLQKYNISDVFHV

A0A6J1JMG4 uncharacterized protein LOC111486519 isoform X13.24e-13390.64Show/hide
Query:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF
        MDEYLKQSKRKLVMWFT+TFKPIMTHDELEPIMATLGF+GLEPVINRDEISWKSYVYSGAHSLIKS+STTERPP+PRLPYPR+DGLHIYTYRAFLDAINF
Subjt:  MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINF

Query:  YLQKYNISDVFHVRGLPLSQNQDQN----RNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDI
        YLQKYNISDVFH+RGLPLSQNQDQN    RNWCRMY ENIHYAYIEGTLDRTTIDLYE QE +NDDNSD+TK+E+IDH +EVIKNDIFEDIVNVVDLKDI
Subjt:  YLQKYNISDVFHVRGLPLSQNQDQN----RNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDI

Query:  ITQ
        ITQ
Subjt:  ITQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGCTCGAACCTATTATGGCGACTCTAGG
CTTTATCGGCCTCGAACCGGTCATTAACCGCGACGAAATCTCCTGGAAATCATACGTATACTCCGGTGCTCATAGCCTGATTAAGTCAATTTCGACGACGGAGCGTCCTC
CGGTACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCTCCAGAAATATAACATCTCCGATGTC
TTCCATGTTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATGCTTACATAGAAGGGACTTTAGATCG
AACAACCATTGATCTATATGAATTTCAAGAGAAAAGTAATGATGATAATAGTGATAACACCAAGGATGAAGAGATTGACCACCCTCGAGAGGTGATAAAGAATGATATTT
TTGAAGATATTGTCAATGTTGTTGATTTGAAAGATATTATAACACAATAA
mRNA sequenceShow/hide mRNA sequence
CACCCTCCAAAAATACTCTCTCAAATCCCTACATTCAAGATCCCTTCCTCCCAAAGAAAACTCAAAAACTCTCCATCACTCCCTCCTCCTTAACCCTTCGATTTCCCGAT
TAAGCCGCCGTAACTCCGCCGTGTAATGGATGAATACCTCAAGCAATCCAAGCGGAAATTAGTCATGTGGTTCACCAGAACCTTCAAGCCGATCATGACGCACGACGAGC
TCGAACCTATTATGGCGACTCTAGGCTTTATCGGCCTCGAACCGGTCATTAACCGCGACGAAATCTCCTGGAAATCATACGTATACTCCGGTGCTCATAGCCTGATTAAG
TCAATTTCGACGACGGAGCGTCCTCCGGTACCGCGATTGCCGTATCCGAGAGTCGACGGTCTTCACATTTATACGTACAGAGCATTTCTTGACGCAATCAATTTTTACCT
CCAGAAATATAACATCTCCGATGTCTTCCATGTTAGAGGATTGCCACTGTCTCAAAACCAAGATCAAAATAGGAATTGGTGTCGTATGTACAATGAAAATATTCATTATG
CTTACATAGAAGGGACTTTAGATCGAACAACCATTGATCTATATGAATTTCAAGAGAAAAGTAATGATGATAATAGTGATAACACCAAGGATGAAGAGATTGACCACCCT
CGAGAGGTGATAAAGAATGATATTTTTGAAGATATTGTCAATGTTGTTGATTTGAAAGATATTATAACACAATAAGATCATCAATGATTACAATGAATACAATTTCGACG
TTTTTTTTTGTAACACATCTTGAAAATGTGTTATTTTTGTAGACATCGTCAGGGTTTTTTTTGTAGCACATCTTGAAAATGTGTTATTTTTGTAGACATCGTTAGGGTTG
TTGATTTCAAAGATATGTTAGGGTTGTTGATTTCAAGTTAGGGTTGTTGATTTCAAAGATATTACAACGCAACAAGATTACCAATGATTACAATGAATACAATTTCGACG
TTTTTTTTTTGTAGCAC
Protein sequenceShow/hide protein sequence
MDEYLKQSKRKLVMWFTRTFKPIMTHDELEPIMATLGFIGLEPVINRDEISWKSYVYSGAHSLIKSISTTERPPVPRLPYPRVDGLHIYTYRAFLDAINFYLQKYNISDV
FHVRGLPLSQNQDQNRNWCRMYNENIHYAYIEGTLDRTTIDLYEFQEKSNDDNSDNTKDEEIDHPREVIKNDIFEDIVNVVDLKDIITQ