; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG04g04480 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG04g04480
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionProtein FAR1-RELATED SEQUENCE
Genome locationCp4.1LG04:6645375..6649913
RNA-Seq ExpressionCp4.1LG04g04480
SyntenyCp4.1LG04g04480
Gene Ontology termsGO:0010018 - far-red light signaling pathway (biological process)
GO:0042753 - positive regulation of circadian rhythm (biological process)
GO:0045893 - positive regulation of transcription, DNA-templated (biological process)
GO:1900056 - negative regulation of leaf senescence (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsIPR004330 - FAR1 DNA binding domain
IPR031052 - FHY3/FAR1 family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF4359665.1 hypothetical protein G4B88_000476 [Cannabis sativa]5.51e-11953.52Show/hide
Query:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS
        MDNEVIEFDIGLG   GGSGR+GDD  + + H  +++EEM+DSPP +  G   GSGEIYLP+GDLLDLEP EGMEFESEEAAKAFYNSYARRVGFSTRVS
Subjt:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS

Query:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------
        SSRRSRRDGAIIQRQFVCAKEGFRN+NEKRTKDREIKRPRT+TRVGCKASLSVKM +SGKWVVS FVREHNHELVPPDQ                     
Subjt:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------

Query:  --------------------------------------------------------------------------------------------ALQEAVKR
                                                                                                    ALQ+A ++
Subjt:  --------------------------------------------------------------------------------------------ALQEAVKR

Query:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        V H  +N+SK + ++GR + +   D S  NH+S   ++ S G +MSEDD+DK+I ELTNELE AN+KCEVYR+NL SVLKDI+DHKLQLSIKVQNIKI
Subjt:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

KAF4363960.1 hypothetical protein G4B88_004260 [Cannabis sativa]1.94e-11953.77Show/hide
Query:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS
        MDNEVIEFDIGLG   GGSGR+GDD  + M H  +++EEM+DSPP +  G   GSGEIYLP+GDLLDLEP EGMEFESEEAAKAFYNSYARRVGFSTRVS
Subjt:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS

Query:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------
        SSRRSRRDGAIIQRQFVCAKEGFRN+NEKRTKDREIKRPRT+TRVGCKASLSVKM +SGKWVVS FVREHNHELVPPDQ                     
Subjt:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------

Query:  --------------------------------------------------------------------------------------------ALQEAVKR
                                                                                                    ALQ+A ++
Subjt:  --------------------------------------------------------------------------------------------ALQEAVKR

Query:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        V H  +N+SK + ++GR K +   D    NH+ S  ++ S G +MSEDD+DK+I ELTNELE AN+KCEVYR+NL SVLKDI+DHKLQLSIKVQNIKI
Subjt:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

PQQ11653.1 protein FAR1-RELATED SEQUENCE 5 [Prunus yedoensis var. nudiflora]8.79e-13366.77Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSG---------LGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVG
        MDNEVIEFDIGLGGG GRDGDD  + + H  +++EEM+DSP +S          +  G GSGEIYLP+GDLLDLEP++GMEFESEEAAKAFYNSYARRVG
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSG---------LGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVG

Query:  FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ---------------
        FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN+NEKRTKDREIKRPRT+TRVGCKASLSVKM DSGKWVVS FV+EHNHELVPPDQ               
Subjt:  FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ---------------

Query:  ---------DALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDI
                 DAL+EA K+V+H  +N+ K + ++G ++ + A       H +S   + S G ++SEDD+DKKI ELTNEL+CANRKCEVYR+NL SVLKDI
Subjt:  ---------DALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDI

Query:  DDHKLQLSIKVQNIKI
        +DHKLQLSIKVQNIKI
Subjt:  DDHKLQLSIKVQNIKI

XP_022989324.1 protein FAR1-RELATED SEQUENCE 5-like [Cucurbita maxima]4.59e-11535.71Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
        MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR

Query:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ------------------------
        RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNH+LVPPDQ                        
Subjt:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ------------------------

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Query:  -----------------------------------------------------------------------------DALQEAVKRVSHTPRNNSKISSI
                                                                                     DALQEAVKRVSHTPRNNSKISSI
Subjt:  -----------------------------------------------------------------------------DALQEAVKRVSHTPRNNSKISSI

Query:  DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        DGRIKADPANDISYTNHSSSTGQD SLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDI+DHKLQLSIKVQNIKI
Subjt:  DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

XP_023529601.1 protein FAR1-RELATED SEQUENCE 5-like [Cucurbita pepo subsp. pepo]3.77e-11736.1Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
        MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR

Query:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ------------------------
        RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ                        
Subjt:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ------------------------

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Query:  -----------------------------------------------------------------------------DALQEAVKRVSHTPRNNSKISSI
                                                                                     DALQEAVKRVSHTPRNNSKISSI
Subjt:  -----------------------------------------------------------------------------DALQEAVKRVSHTPRNNSKISSI

Query:  DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
Subjt:  DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

TrEMBL top hitse value%identityAlignment
A0A314YYQ3 Protein FAR1-RELATED SEQUENCE4.25e-13366.77Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSG---------LGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVG
        MDNEVIEFDIGLGGG GRDGDD  + + H  +++EEM+DSP +S          +  G GSGEIYLP+GDLLDLEP++GMEFESEEAAKAFYNSYARRVG
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSG---------LGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVG

Query:  FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ---------------
        FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRN+NEKRTKDREIKRPRT+TRVGCKASLSVKM DSGKWVVS FV+EHNHELVPPDQ               
Subjt:  FSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ---------------

Query:  ---------DALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDI
                 DAL+EA K+V+H  +N+ K + ++G ++ + A       H +S   + S G ++SEDD+DKKI ELTNEL+CANRKCEVYR+NL SVLKDI
Subjt:  ---------DALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDI

Query:  DDHKLQLSIKVQNIKI
        +DHKLQLSIKVQNIKI
Subjt:  DDHKLQLSIKVQNIKI

A0A6J1EJN6 Protein FAR1-RELATED SEQUENCE5.35e-11399.43Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
        MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDS PLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR

Query:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ
        RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ
Subjt:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ

A0A6J1JP10 Protein FAR1-RELATED SEQUENCE2.22e-11535.71Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
        MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSR

Query:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ------------------------
        RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNH+LVPPDQ                        
Subjt:  RSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQ------------------------

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Query:  -----------------------------------------------------------------------------DALQEAVKRVSHTPRNNSKISSI
                                                                                     DALQEAVKRVSHTPRNNSKISSI
Subjt:  -----------------------------------------------------------------------------DALQEAVKRVSHTPRNNSKISSI

Query:  DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        DGRIKADPANDISYTNHSSSTGQD SLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDI+DHKLQLSIKVQNIKI
Subjt:  DGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

A0A7J6EMT8 Protein FAR1-RELATED SEQUENCE2.67e-11953.52Show/hide
Query:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS
        MDNEVIEFDIGLG   GGSGR+GDD  + + H  +++EEM+DSPP +  G   GSGEIYLP+GDLLDLEP EGMEFESEEAAKAFYNSYARRVGFSTRVS
Subjt:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS

Query:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------
        SSRRSRRDGAIIQRQFVCAKEGFRN+NEKRTKDREIKRPRT+TRVGCKASLSVKM +SGKWVVS FVREHNHELVPPDQ                     
Subjt:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------

Query:  --------------------------------------------------------------------------------------------ALQEAVKR
                                                                                                    ALQ+A ++
Subjt:  --------------------------------------------------------------------------------------------ALQEAVKR

Query:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        V H  +N+SK + ++GR + +   D S  NH+S   ++ S G +MSEDD+DK+I ELTNELE AN+KCEVYR+NL SVLKDI+DHKLQLSIKVQNIKI
Subjt:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

A0A7J6F2R7 Protein FAR1-RELATED SEQUENCE9.39e-12053.77Show/hide
Query:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS
        MDNEVIEFDIGLG   GGSGR+GDD  + M H  +++EEM+DSPP +  G   GSGEIYLP+GDLLDLEP EGMEFESEEAAKAFYNSYARRVGFSTRVS
Subjt:  MDNEVIEFDIGLG---GGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVS

Query:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------
        SSRRSRRDGAIIQRQFVCAKEGFRN+NEKRTKDREIKRPRT+TRVGCKASLSVKM +SGKWVVS FVREHNHELVPPDQ                     
Subjt:  SSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQD--------------------

Query:  --------------------------------------------------------------------------------------------ALQEAVKR
                                                                                                    ALQ+A ++
Subjt:  --------------------------------------------------------------------------------------------ALQEAVKR

Query:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI
        V H  +N+SK + ++GR K +   D    NH+ S  ++ S G +MSEDD+DK+I ELTNELE AN+KCEVYR+NL SVLKDI+DHKLQLSIKVQNIKI
Subjt:  VSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKI

SwissProt top hitse value%identityAlignment
Q3E7I5 Protein FAR1-RELATED SEQUENCE 123.2e-1839.68Show/hide
Query:  LEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFV
        +EP+ G+EF++ E A+ FYN+YA R GF  R     RSR DG +  R+FVC+KEGF+ +N               +R GC A + V+  D+GKWV+    
Subjt:  LEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFV

Query:  REHNHELVPPDQDALQEAVKRVSHTP
        +EHNHEL    + +++E   R S  P
Subjt:  REHNHELVPPDQDALQEAVKRVSHTP

Q3EBQ3 Protein FAR1-RELATED SEQUENCE 27.0e-1845.45Show/hide
Query:  EPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVR
        E   GM+FES+EAA  FY  YAR VGF   + +SRRS+R G  I  +  C++ G      KR K   I  PR+  + GCKA L +K  +  KWV+  FV+
Subjt:  EPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVR

Query:  EHNHELVPPD
        EHNHE+ P D
Subjt:  EHNHELVPPD

Q9LIE5 Protein FAR-RED ELONGATED HYPOCOTYL 33.4e-2033Show/hide
Query:  IEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEM---------IDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRV
        ++ D+ L  G    GDD    + +    EE+M         ++      +G G  +GE+ +   + ++LEP  GMEFES   A +FY  Y+R +GF+T +
Subjt:  IEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEM---------IDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRV

Query:  SSSRRSRRDGAIIQRQFVCAKEGFRNMNEK---RTKDREIKRP-------RTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRV
         +SRRS+     I  +F C++ G +   +K   R + R+ K+        RT  +  CKAS+ VK    GKWV+  FVREHNHEL+P    A+ E  +++
Subjt:  SSSRRSRRDGAIIQRQFVCAKEGFRNMNEK---RTKDREIKRP-------RTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRV

Q9SWG3 Protein FAR-RED IMPAIRED RESPONSE 11.1e-1841.44Show/hide
Query:  LDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSC
        LDLEP  G++F++ EAA  FY  YA+ +GF+T + +SRRS++    I  +F C++ G    +E         R  TV +  CKAS+ VK    GKW++  
Subjt:  LDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSC

Query:  FVREHNHELVP
        FV++HNHEL+P
Subjt:  FVREHNHELVP

Q9SZL8 Protein FAR1-RELATED SEQUENCE 55.3e-6657.03Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPL-SGLGCGAGSGEIYLPDG-----DLLDLEPHEGMEFESEEAAKAFYNSYARRVGFST
        MDNEV++FDIG+G  SG D DD ++ + H ++++++M+DSP +  G G    SG  Y P+      DLLDLEP++G+EFESEEAAKAFYNSYARR+GFST
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPL-SGLGCGAGSGEIYLPDG-----DLLDLEPHEGMEFESEEAAKAFYNSYARRVGFST

Query:  RVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNS
        RVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRT+TRVGCKASLSVKM DSGKW+VS FV++HNHELVPPDQ           H  R++ 
Subjt:  RVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNS

Query:  KISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECAN
        +IS         PA  +  T  ++  G  R +   + E     K+     E++C N
Subjt:  KISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECAN

Arabidopsis top hitse value%identityAlignment
AT2G43280.1 Far-red impaired responsive (FAR1) family protein6.9e-2936.87Show/hide
Query:  LEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFV
        +EP EG+ FESE+AAK FY+ Y+RR+GF  RV S RRS +DG I+ R+F C KEG  +    R K   +++PR  TR GCKA + VK   SGKWV++ FV
Subjt:  LEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFV

Query:  REHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVL
        +EHNH LV   ++A         HT                                           D+ DK+I ELT EL    R C  Y+  L +  
Subjt:  REHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVL

Query:  KDIDDHKLQLSIKVQNI
        K +++H  Q++ KV+N+
Subjt:  KDIDDHKLQLSIKVQNI

AT3G07500.1 Far-red impaired responsive (FAR1) family protein3.7e-3036.41Show/hide
Query:  LEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFV
        +EP  GMEFESEEAAK+FY++YA  +GF  RV + RRS RDG ++ R+ VC KEGFR    +R++ R   +PR +TR GCKA + VK   SG W+V+ F 
Subjt:  LEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFV

Query:  REHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVL
        +EHNH L+P     L   V+R    P+                                       + D+ D KI EL+ EL    R+C   +  L  VL
Subjt:  REHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVL

Query:  KDIDDHKLQLSIKVQNI
        K++++H   L+I + ++
Subjt:  KDIDDHKLQLSIKVQNI

AT3G59470.1 Far-red impaired responsive (FAR1) family protein2.1e-2534.84Show/hide
Query:  LGGGSGR----DGDDYSMAMVHDSMEEEEMI--DSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRD
        +G  SG+      DD    +  +S E++E +  DS PL+        G+           EP+ G EFESE AA  FYN+YA +VGF  RVS   RSR D
Subjt:  LGGGSGR----DGDDYSMAMVHDSMEEEEMI--DSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRD

Query:  GAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKR---VSHTPRNNSKISSIDGR
        G+ I RQ VC KEG+R +  KR K   + R R  TRVGCKA + ++  +SGKWV++ FV+EHNH L+P         V+R       P  + KI  +  +
Subjt:  GAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKR---VSHTPRNNSKISSIDGR

Query:  IKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNEL
        + A+     +Y  H     +     I    + L K+I  + + +
Subjt:  IKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNEL

AT4G12850.1 Far-red impaired responsive (FAR1) family protein1.2e-2533.78Show/hide
Query:  GDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWV
        GDL   EP+ G++FESEE AK FY  Y++R+GF  R+   RRS  DG  + R+  C K+GF   N++ +         + +R GCKA++ VKM  SGKWV
Subjt:  GDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWV

Query:  VSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSN
        V+ F++EHNH L                                               S+  D       S  D ++KI ELT E+EC +R C+VYR  
Subjt:  VSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSN

Query:  LFSVLKDIDDHKLQLSIKVQNI
        L S + +++ +  +LS+KV++I
Subjt:  LFSVLKDIDDHKLQLSIKVQNI

AT4G38180.1 FAR1-related sequence 53.8e-6757.03Show/hide
Query:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPL-SGLGCGAGSGEIYLPDG-----DLLDLEPHEGMEFESEEAAKAFYNSYARRVGFST
        MDNEV++FDIG+G  SG D DD ++ + H ++++++M+DSP +  G G    SG  Y P+      DLLDLEP++G+EFESEEAAKAFYNSYARR+GFST
Subjt:  MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPL-SGLGCGAGSGEIYLPDG-----DLLDLEPHEGMEFESEEAAKAFYNSYARRVGFST

Query:  RVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNS
        RVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRT+TRVGCKASLSVKM DSGKW+VS FV++HNHELVPPDQ           H  R++ 
Subjt:  RVSSSRRSRRDGAIIQRQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNS

Query:  KISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECAN
        +IS         PA  +  T  ++  G  R +   + E     K+     E++C N
Subjt:  KISSIDGRIKADPANDISYTNHSSSTGQDRSLGINMSEDDLDKKINELTNELECAN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATAATGAGGTGATTGAATTTGATATTGGATTGGGGGGAGGCAGTGGGAGAGATGGAGATGACTATTCTATGGCTATGGTGCATGATTCCATGGAGGAAGAGGAAAT
GATTGATAGCCCTCCTTTGAGTGGTCTTGGTTGTGGTGCTGGCAGTGGTGAGATTTATCTTCCTGATGGTGATCTTTTGGATCTTGAACCTCATGAAGGAATGGAATTCG
AGTCGGAAGAGGCTGCCAAGGCTTTCTATAACTCGTATGCTCGACGGGTTGGGTTTAGTACTCGTGTCAGCTCCTCCCGTCGATCTAGGCGTGATGGAGCGATTATACAG
AGGCAATTTGTTTGTGCCAAAGAGGGGTTTAGGAATATGAATGAGAAACGAACCAAAGACCGAGAAATTAAGCGCCCTCGAACCGTTACAAGAGTCGGTTGCAAAGCATC
CTTGTCTGTAAAGATGCACGATTCTGGGAAATGGGTTGTGTCTTGTTTTGTTAGAGAGCATAACCATGAGTTAGTTCCTCCTGATCAGGATGCCCTTCAGGAGGCTGTAA
AAAGGGTTTCTCATACGCCAAGGAATAACAGTAAAATTTCTTCGATCGATGGGCGAATTAAAGCGGACCCTGCAAATGATATAAGCTATACTAATCATAGTAGTAGCACA
GGTCAAGACAGGAGCTTGGGTATAAACATGTCCGAGGACGATTTGGACAAGAAAATCAATGAACTGACGAACGAGTTGGAGTGTGCAAATCGAAAGTGTGAAGTGTATCG
ATCTAACCTTTTTTCGGTGCTGAAAGATATTGATGATCACAAGTTGCAATTATCTATTAAAGTGCAGAACATAAAAATCAGGGGAGAAAATGACTGTTTTGAAGACCGTG
GCGATGTTCGTCTTATTGATGGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATAATGAGGTGATTGAATTTGATATTGGATTGGGGGGAGGCAGTGGGAGAGATGGAGATGACTATTCTATGGCTATGGTGCATGATTCCATGGAGGAAGAGGAAAT
GATTGATAGCCCTCCTTTGAGTGGTCTTGGTTGTGGTGCTGGCAGTGGTGAGATTTATCTTCCTGATGGTGATCTTTTGGATCTTGAACCTCATGAAGGAATGGAATTCG
AGTCGGAAGAGGCTGCCAAGGCTTTCTATAACTCGTATGCTCGACGGGTTGGGTTTAGTACTCGTGTCAGCTCCTCCCGTCGATCTAGGCGTGATGGAGCGATTATACAG
AGGCAATTTGTTTGTGCCAAAGAGGGGTTTAGGAATATGAATGAGAAACGAACCAAAGACCGAGAAATTAAGCGCCCTCGAACCGTTACAAGAGTCGGTTGCAAAGCATC
CTTGTCTGTAAAGATGCACGATTCTGGGAAATGGGTTGTGTCTTGTTTTGTTAGAGAGCATAACCATGAGTTAGTTCCTCCTGATCAGGATGCCCTTCAGGAGGCTGTAA
AAAGGGTTTCTCATACGCCAAGGAATAACAGTAAAATTTCTTCGATCGATGGGCGAATTAAAGCGGACCCTGCAAATGATATAAGCTATACTAATCATAGTAGTAGCACA
GGTCAAGACAGGAGCTTGGGTATAAACATGTCCGAGGACGATTTGGACAAGAAAATCAATGAACTGACGAACGAGTTGGAGTGTGCAAATCGAAAGTGTGAAGTGTATCG
ATCTAACCTTTTTTCGGTGCTGAAAGATATTGATGATCACAAGTTGCAATTATCTATTAAAGTGCAGAACATAAAAATCAGGGGAGAAAATGACTGTTTTGAAGACCGTG
GCGATGTTCGTCTTATTGATGGCTAACCTTCTCAGATCAGCATCGTTTTCGACATCAATATCCGAGGACCTCCACTATAACTTGGCGTTTGACGTTAAGGTGATTTTTTA
TTCCTCGATGATTGTACTTGTGGCTTTAGAGTACTGTTCGAGATCAAAGATGAAATTCTCCAGATAGCATGATGAGCCCTGCAAAAGAACTTAGATTTCGACAAGTGATG
CTTTTACCTTACTAAAATGGGTTGCACCCTTGTCGATGCTTGTTTTCTCACTATTCTCATGGTGAGGTTTACTATAGCGCTCAAATTCGCTAGATCTGTCCTCACAACAT
CGAGGCAACTCTTAAATCTTTGGTAAGGTTTGTCACCATCCGAACTTTTGCCTTTTGGGAGCTATCTAATTCTTTCATACACTCCTCCATCTGGGCTACAGAGCTGGTCG
AGCTATCCCACGCTCCAAGCTACCTGTAATGGTCTCTCAAGTTTTATCGTTGTGTCTATTTGGTTCTTGAAATTTTAAAATTAACATTTTAATCCTAGGTTTGGTCACTA
GAGTTGTTTCTCTAGTTTGTCAAATCAGGCCTGCATTCCCGATGTCTTGATTTGACACTCCAAATTGGTTGCATTGACTCAAATAATCAAACTCGAGCATACAAAACCAA
GCAACCTTGAATTGAGCATACAGCCCAAGTCCACCGTTAACAGATATTGTCTTTTTTGAACTTTTCATTTCGAGCTTCCCTCAAAGTTTTAAAATACGTATACTAAAGAA
AGGTTTCCACACCTTTATAAGAAATGTTTTGTTCTCCTCTCCAACCAATATAAGAACTAAAAACCTCCATTAAAACCTCCAAGCTCGGAAGCAAGCAGTTCTCCGCCGTA
ACCCATGAACCAGAATCAAAGCTCCTCGACACAGACCCAGATCCGATTCACCAACCAAGCTTTAGCCACTGCAGAGAAGTAACTAATGGCAACGTGGGGTCACCGGCAAA
TGGTAATTGACGGAACGGAACGGAACGGAATCAACTTGTAAGCAACCAACGGAACGGAAGTTGAAGGGGAGAGATTGGTCCCACCGGCGACCAACTTCCTGCGGAGAAGT
GTGGGGTTAATGACTAAACAAGTGTGGCTTCCATTCTTTGCATCTCATGTTATTTGATGGAACCTACCCTTCTTTAAAAAAATTAAAAAAAAAAAAAATTAAAATTAAAA
AATTA
Protein sequenceShow/hide protein sequence
MDNEVIEFDIGLGGGSGRDGDDYSMAMVHDSMEEEEMIDSPPLSGLGCGAGSGEIYLPDGDLLDLEPHEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQ
RQFVCAKEGFRNMNEKRTKDREIKRPRTVTRVGCKASLSVKMHDSGKWVVSCFVREHNHELVPPDQDALQEAVKRVSHTPRNNSKISSIDGRIKADPANDISYTNHSSST
GQDRSLGINMSEDDLDKKINELTNELECANRKCEVYRSNLFSVLKDIDDHKLQLSIKVQNIKIRGENDCFEDRGDVRLIDG