; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG04g08000 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG04g08000
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCp4.1LG04:3543550..3547993
RNA-Seq ExpressionCp4.1LG04g08000
SyntenyCp4.1LG04g08000
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022450.1 hypothetical protein SDJN02_16181, partial [Cucurbita argyrosperma subsp. argyrosperma]8.91e-17996.51Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSS TVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIAD PAILDDVWINRFPSAGK CT ETPDLLEESGSFSD RHLRNTKNSY+SARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDN PGEVSGGMP AKRLKKASSDSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

XP_022927649.1 uncharacterized protein LOC111434473 isoform X1 [Cucurbita moschata]1.83e-14382.56Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCTPETPD LEESGSFSDRRHLRNTKNSYRSARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMP AKRLKKAS+DSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

XP_022927650.1 uncharacterized protein LOC111434473 isoform X2 [Cucurbita moschata]6.86e-14182.17Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAV THWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCTPETPD LEESGSFSDRRHLRNTKNSYRSARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMP AKRLKKAS+DSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

XP_023529516.1 uncharacterized protein LOC111792349 isoform X1 [Cucurbita pepo subsp. pepo]7.40e-187100Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

XP_023529517.1 uncharacterized protein LOC111792349 isoform X2 [Cucurbita pepo subsp. pepo]1.34e-14584.11Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

TrEMBL top hitse value%identityAlignment
A0A6J1EIL3 uncharacterized protein LOC111434473 isoform X18.85e-14482.56Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCTPETPD LEESGSFSDRRHLRNTKNSYRSARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMP AKRLKKAS+DSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

A0A6J1EPK3 uncharacterized protein LOC111434473 isoform X23.32e-14182.17Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAV THWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCTPETPD LEESGSFSDRRHLRNTKNSYRSARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMP AKRLKKAS+DSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X23.35e-12372.73Show/hide
Query:  HTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKD----FPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRC
        HTPSSMSPPV DR+ P   SASDLT LNS+SYSSS TVD  +      PSH C QLDAVQTHWT+EKHR +L SLEASFVQ+LH+YR L+ALSSKQKMR 
Subjt:  HTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKD----FPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRC

Query:  RPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRES
        +P MP+ISSSE MVLQDASWQKAN+GR DPLL++ AD PAIL+DVWIN FPSAG QCT ET D+LEE GS SDR H+RN  NS +SARSSQQ+PPCCR+S
Subjt:  RPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRES

Query:  YTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        +TI+TEVSDQNFVD HPGE+S G P  KRLKKASSDSS N++V PYKR S ER
Subjt:  YTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

A0A6J1JEE3 uncharacterized protein LOC111486142 isoform X28.69e-13780.62Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGD LLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLN+QSYSSS TVDRFKDFPSHRCLQLDAV THWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCT ETPDL+EESGSFSDRRHLRNTKNSYR ARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMP AKRLKKASSDSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

A0A6J1JIM0 uncharacterized protein LOC111486142 isoform X12.32e-13981.01Show/hide
Query:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
        MGD LLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLN+QSYSSS TVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK
Subjt:  MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSK

Query:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP
        QKMRCRPSMPHISSSE+       +  +  GR                           KQCT ETPDL+EESGSFSDRRHLRNTKNSYR ARSSQQ+PP
Subjt:  QKMRCRPSMPHISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPP

Query:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER
        CCRESYTIITEVSDQNFVDNHPGEVSGGMP AKRLKKASSDSSANDQVVPYKRPSLER
Subjt:  CCRESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.1e-0831.16Show/hide
Query:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +       S    S  +  VL D  WQK N+ + +  +      +    L   WI  +   
Subjt:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA

Query:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTII---TEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR
         K   P T +   +  S S+    +    S  SA S +Q+    R+   I     EVSDQNFV+     + G   ++K++K    S+SS+ DQVVP  +
Subjt:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTII---TEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR

Q8L983 Cold-regulated protein 283.3e-0829.24Show/hide
Query:  DRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCR--PSMPHISSSELM
        DR     S+ S      S S  S +T +  +   S    +LD   T WT+EKH SYL  LE+SFV++L+    L    +++  R R   S  H S+ +  
Subjt:  DRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCR--PSMPHISSSELM

Query:  VLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFV
        VLQ+  WQK N G+    LE  +++          RF     +  PE                  N+  +Y    + Q    C  E  T  +E S QNF 
Subjt:  VLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFV

Query:  DNHPGEVSGGMPNAKRLKKASSDSSA--NDQVVPYK
        +    E  G + + KR ++A++D S+   DQVVP +
Subjt:  DNHPGEVSGGMPNAKRLKKASSDSSA--NDQVVPYK

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)2.4e-0929.24Show/hide
Query:  DRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCR--PSMPHISSSELM
        DR     S+ S      S S  S +T +  +   S    +LD   T WT+EKH SYL  LE+SFV++L+    L    +++  R R   S  H S+ +  
Subjt:  DRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCR--PSMPHISSSELM

Query:  VLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFV
        VLQ+  WQK N G+    LE  +++          RF     +  PE                  N+  +Y    + Q    C  E  T  +E S QNF 
Subjt:  VLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFV

Query:  DNHPGEVSGGMPNAKRLKKASSDSSA--NDQVVPYK
        +    E  G + + KR ++A++D S+   DQVVP +
Subjt:  DNHPGEVSGGMPNAKRLKKASSDSSA--NDQVVPYK

AT4G33980.2 FUNCTIONS IN: molecular_function unknown2.4e-0929.24Show/hide
Query:  DRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCR--PSMPHISSSELM
        DR     S+ S      S S  S +T +  +   S    +LD   T WT+EKH SYL  LE+SFV++L+    L    +++  R R   S  H S+ +  
Subjt:  DRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCR--PSMPHISSSELM

Query:  VLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFV
        VLQ+  WQK N G+    LE  +++          RF     +  PE                  N+  +Y    + Q    C  E  T  +E S QNF 
Subjt:  VLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFV

Query:  DNHPGEVSGGMPNAKRLKKASSDSSA--NDQVVPYK
        +    E  G + + KR ++A++D S+   DQVVP +
Subjt:  DNHPGEVSGGMPNAKRLKKASSDSSA--NDQVVPYK

AT5G42900.1 cold regulated gene 278.1e-1031.16Show/hide
Query:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +       S    S  +  VL D  WQK N+ + +  +      +    L   WI  +   
Subjt:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA

Query:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTII---TEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR
         K   P T +   +  S S+    +    S  SA S +Q+    R+   I     EVSDQNFV+     + G   ++K++K    S+SS+ DQVVP  +
Subjt:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTII---TEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR

AT5G42900.2 cold regulated gene 278.1e-1031.16Show/hide
Query:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +       S    S  +  VL D  WQK N+ + +  +      +    L   WI  +   
Subjt:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA

Query:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTII---TEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR
         K   P T +   +  S S+    +    S  SA S +Q+    R+   I     EVSDQNFV+     + G   ++K++K    S+SS+ DQVVP  +
Subjt:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTII---TEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR

AT5G42900.3 cold regulated gene 274.7e-1030.81Show/hide
Query:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA
        ++T WT+EKH  YL S+EASFV +L  Y  L AL   + +       S    S  +  VL D  WQK N+ + +  +      +    L   WI  +   
Subjt:  VQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRP---SMPHISSSELMVLQDASWQKANIGRNDPLL--ERIADYPAILDDVWINRFPSA

Query:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCR--ESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR
         K   P T +   +  S S+    +    S  SA S +Q+    R  +  ++  EVSDQNFV+     + G   ++K++K    S+SS+ DQVVP  +
Subjt:  GKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCR--ESYTIITEVSDQNFVDNHPGEVSGGMPNAKRLKKA-SSDSSANDQVVPYKR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCGACCATCTTCTACATCTTCCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGTAGATCGACAACCACCCTCCCCGTCCTCTGCCAGCGACTTGACTTGTTTGAA
CTCCCAATCCTACTCTTCTTCCCTTACTGTTGATCGCTTCAAGGATTTTCCTTCTCATCGCTGTCTGCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACA
GATCATATCTTGGTTCTTTAGAAGCATCTTTTGTTCAAGAGTTGCATCAATATAGACGCTTGCAAGCTTTGTCCTCAAAACAGAAAATGCGTTGCAGGCCGAGCATGCCT
CATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGCAGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGAAAGGATAGCCGATTATCCTGCTATTTT
AGACGATGTTTGGATAAATCGTTTTCCTTCTGCAGGAAAGCAGTGTACTCCGGAGACTCCTGATCTCCTTGAAGAATCTGGAAGTTTTAGTGATAGGAGACACTTAAGAA
ACACGAAAAACTCCTATCGATCTGCCAGAAGTTCACAGCAGGTCCCTCCATGCTGTCGTGAGTCTTATACAATAATTACAGAAGTTTCCGATCAAAACTTTGTGGATAAT
CATCCAGGAGAGGTGTCTGGTGGCATGCCTAATGCAAAAAGATTAAAGAAAGCTTCTTCTGATTCTTCGGCCAATGACCAGGTAGTACCATATAAAAGACCATCATTAGA
AAGATAA
mRNA sequenceShow/hide mRNA sequence
TGGAGCCTTTCATTTGGGTTGCGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGTTTCTGCACGACCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCTCTC
ACGATTCCTTGTTCTTTGATTTCATTCCATTATTTGCTTTTCTTCCATCTTTGATCCATTCGTAATGGGCGACCATCTTCTACATCTTCCTCATACGCCGTCGTCCATGT
CGCCGCCGGTTGTAGATCGACAACCACCCTCCCCGTCCTCTGCCAGCGACTTGACTTGTTTGAACTCCCAATCCTACTCTTCTTCCCTTACTGTTGATCGCTTCAAGGAT
TTTCCTTCTCATCGCTGTCTGCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATCATATCTTGGTTCTTTAGAAGCATCTTTTGTTCAAGAGTTGCA
TCAATATAGACGCTTGCAAGCTTTGTCCTCAAAACAGAAAATGCGTTGCAGGCCGAGCATGCCTCATATATCTTCTTCAGAGTTGATGGTCCTTCAAGATGCCTCCTGGC
AGAAGGCTAACATTGGGAGGAATGATCCTTTATTGGAAAGGATAGCCGATTATCCTGCTATTTTAGACGATGTTTGGATAAATCGTTTTCCTTCTGCAGGAAAGCAGTGT
ACTCCGGAGACTCCTGATCTCCTTGAAGAATCTGGAAGTTTTAGTGATAGGAGACACTTAAGAAACACGAAAAACTCCTATCGATCTGCCAGAAGTTCACAGCAGGTCCC
TCCATGCTGTCGTGAGTCTTATACAATAATTACAGAAGTTTCCGATCAAAACTTTGTGGATAATCATCCAGGAGAGGTGTCTGGTGGCATGCCTAATGCAAAAAGATTAA
AGAAAGCTTCTTCTGATTCTTCGGCCAATGACCAGGTAGTACCATATAAAAGACCATCATTAGAAAGATAAAAGCCAGACGCCACACTGTCTTCAGAACATCCTCAAAAC
TTGATGCCTCCAAATTCAGATTTGTGTTACTTTATGAGATGGAGCTGACAACATTTCATTCCAACATGTGAAAAATGGTCTGTTCAAGCTCGCTAGCCAAATACGACATG
GTTTTGTTTTCGATTCGAAAGAGCATTGTAAAGAAAACAAGGGAAATGGCGGCCATAATTCTTGACCAGAAGATGTGCAGCAAGAAGGAGAAAATATGTTTGTATATGGT
ACAAACTAAACTTTTTCCTAGTTCAAATATTGAGTTAAATATATGTTAACCCTTTCTTTTCTCCTGTTTTCCTTTTTCTTAGAGGTTGAAAAAATGGAAATTCTAATAGG
GTGTAGGTTATTGAATATAGGTATTAGTTATACAGAAGCTAAGACACCCTGATAGTGAGATAGATACACACTTTTTTAGTTTGTTTCAAATACTCTCGTTTTGAACCTCT
GTTAGGAATCTCAAGTGTAAATTATTATTAGGAGTCTTCCAACTGAAATTTTCATACATGTTCATACAACACCCTATATACGTTATGTTACACAACTTGTTTATTATTAT
TATTATTATTTCATATT
Protein sequenceShow/hide protein sequence
MGDHLLHLPHTPSSMSPPVVDRQPPSPSSASDLTCLNSQSYSSSLTVDRFKDFPSHRCLQLDAVQTHWTDEKHRSYLGSLEASFVQELHQYRRLQALSSKQKMRCRPSMP
HISSSELMVLQDASWQKANIGRNDPLLERIADYPAILDDVWINRFPSAGKQCTPETPDLLEESGSFSDRRHLRNTKNSYRSARSSQQVPPCCRESYTIITEVSDQNFVDN
HPGEVSGGMPNAKRLKKASSDSSANDQVVPYKRPSLER