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Cp4.1LG04g14830 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG04g14830
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionCLAVATA3/ESR-RELATED
Genome locationCp4.1LG04:11868624..11868902
RNA-Seq ExpressionCp4.1LG04g14830
SyntenyCp4.1LG04g14830
Gene Ontology termsNA
InterPro domainsIPR038821 - CLE-related protein 45-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6587538.1 hypothetical protein SDJN03_16103, partial [Cucurbita argyrosperma subsp. sororia]5.90e-58100Show/hide
Query:  MLSTKALVFALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS
        MLSTKALVFALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS
Subjt:  MLSTKALVFALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS

KAG6589506.1 hypothetical protein SDJN03_14929, partial [Cucurbita argyrosperma subsp. sororia]6.03e-3474.16Show/hide
Query:  KALVFALLLAG-VSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPD-SVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR
        K L F  LLAG V   +QPQTASGL TID+ALKWVAFKSP  +TH  D S KKL MKNM++APSPAM+FDPNQSNKR VKKGSDPIHNR
Subjt:  KALVFALLLAG-VSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPD-SVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR

KDO55565.1 hypothetical protein CISIN_1g039594mg [Citrus sinensis]4.94e-1654.65Show/hide
Query:  FALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSP-ITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR
        F LL+    L +QPQ  SGL +IDL L+W     P + NT    +V  K L+M N SLAP+P++ FDPNQSNKR V+KGSDPIHNR
Subjt:  FALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSP-ITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR

KGN63668.1 hypothetical protein Csa_014085 [Cucumis sativus]1.80e-2666.67Show/hide
Query:  STKALVFALLLAGVSLCV---QPQT-ASGLTTIDLALKWVAFKSPIT-NTHNPDSVKKLKMKNMSLA-PSPAMHFDPNQSNKRGVKKGSDPIHNRS
        S K L F  ++A   LCV   QPQT A+GL+TID ALKWVAFKS  T NTH  DS  +   KN++LA PSPAM+FDPNQSNKRGVKKGSDPIHNRS
Subjt:  STKALVFALLLAGVSLCV---QPQT-ASGLTTIDLALKWVAFKSPIT-NTHNPDSVKKLKMKNMSLA-PSPAMHFDPNQSNKRGVKKGSDPIHNRS

OMP04794.1 hypothetical protein COLO4_09292 [Corchorus olitorius]5.21e-1652.87Show/hide
Query:  FALLLAGVSLCV-QPQTASGLTTIDLALKWVAFKSPITNTHN---PDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR
        F LLLA +SL V QP+  SGL +IDLAL+W     P          D+         SLAPSP+M FDPNQS+KR V+KGSDPIHNR
Subjt:  FALLLAGVSLCV-QPQTASGLTTIDLALKWVAFKSPITNTHN---PDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR

TrEMBL top hitse value%identityAlignment
A0A067ENV6 Uncharacterized protein2.39e-1654.65Show/hide
Query:  FALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSP-ITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR
        F LL+    L +QPQ  SGL +IDL L+W     P + NT    +V  K L+M N SLAP+P++ FDPNQSNKR V+KGSDPIHNR
Subjt:  FALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSP-ITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR

A0A0A0LPD5 Uncharacterized protein8.70e-2766.67Show/hide
Query:  STKALVFALLLAGVSLCV---QPQT-ASGLTTIDLALKWVAFKSPIT-NTHNPDSVKKLKMKNMSLA-PSPAMHFDPNQSNKRGVKKGSDPIHNRS
        S K L F  ++A   LCV   QPQT A+GL+TID ALKWVAFKS  T NTH  DS  +   KN++LA PSPAM+FDPNQSNKRGVKKGSDPIHNRS
Subjt:  STKALVFALLLAGVSLCV---QPQT-ASGLTTIDLALKWVAFKSPIT-NTHNPDSVKKLKMKNMSLA-PSPAMHFDPNQSNKRGVKKGSDPIHNRS

A0A1R3KCL9 Uncharacterized protein2.52e-1652.87Show/hide
Query:  FALLLAGVSLCV-QPQTASGLTTIDLALKWVAFKSPITNTHN---PDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR
        F LLLA +SL V QP+  SGL +IDLAL+W     P          D+         SLAPSP+M FDPNQS+KR V+KGSDPIHNR
Subjt:  FALLLAGVSLCV-QPQTASGLTTIDLALKWVAFKSPITNTHN---PDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR

A0A314YU30 Uncharacterized protein9.67e-1653.85Show/hide
Query:  LCVQPQTASGLTTIDLALKW-VAFKSPITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS
        L +QP+  SGL ++DLAL+W     S + + H  ++V  + L+ K +SLAP+P+M FDPNQSNKR V+KGSDPIHNRS
Subjt:  LCVQPQTASGLTTIDLALKW-VAFKSPITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS

V4VM13 Uncharacterized protein9.67e-1653.49Show/hide
Query:  FALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSP-ITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR
        F LL+    L +QPQ  SGL +ID  L+W     P + NT    +V  K L+M N SLAP+P++ FDPNQSNKR V+KGSDPIHNR
Subjt:  FALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSP-ITNTHNPDSV--KKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCAGCACCAAAGCTTTGGTCTTTGCCTTACTTCTTGCTGGGGTTTCCTTGTGTGTTCAACCCCAAACAGCATCTGGGCTCACCACCATTGATCTTGCTCTCAAATG
GGTGGCCTTCAAATCGCCAATTACCAACACCCACAACCCTGATTCTGTGAAGAAATTGAAGATGAAGAACATGAGCCTGGCTCCTTCACCAGCCATGCATTTTGACCCCA
ATCAGTCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGATCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCTCAGCACCAAAGCTTTGGTCTTTGCCTTACTTCTTGCTGGGGTTTCCTTGTGTGTTCAACCCCAAACAGCATCTGGGCTCACCACCATTGATCTTGCTCTCAAATG
GGTGGCCTTCAAATCGCCAATTACCAACACCCACAACCCTGATTCTGTGAAGAAATTGAAGATGAAGAACATGAGCCTGGCTCCTTCACCAGCCATGCATTTTGACCCCA
ATCAGTCCAACAAAAGAGGAGTCAAGAAAGGATCCGACCCGATTCACAACAGATCCTAG
Protein sequenceShow/hide protein sequence
MLSTKALVFALLLAGVSLCVQPQTASGLTTIDLALKWVAFKSPITNTHNPDSVKKLKMKNMSLAPSPAMHFDPNQSNKRGVKKGSDPIHNRS