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Cp4.1LG05g04430 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG05g04430
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionProtein GL2-INTERACTING REPRESSOR 1
Genome locationCp4.1LG05:2555104..2555424
RNA-Seq ExpressionCp4.1LG05g04430
SyntenyCp4.1LG05g04430
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061725.1 hypothetical protein E6C27_scaffold212G001000 [Cucumis melo var. makuwa]2.57e-3668.42Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSS----MSMFGGSESGSGSDVSVESSCLSLWDGEVEED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNN
        MSKR RSSE EV LRV++N+SPTTSS    +S FGGS SGSG       SCLS  +GE +     E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNN
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSS----MSMFGGSESGSGSDVSVESSCLSLWDGEVEED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNN

Query:  VFLDFFNQQ-KHHA
        VFLDFF QQ +HHA
Subjt:  VFLDFFNQQ-KHHA

KAG6605971.1 hypothetical protein SDJN03_03288, partial [Cucurbita argyrosperma subsp. sororia]2.59e-6598.11Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
        MSKRPRSSE EVALRVDMNRSPTTSSMSMFGGSESG GSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN

Query:  QQKHHA
        QQKHHA
Subjt:  QQKHHA

KAG7010337.1 hypothetical protein SDJN02_27130, partial [Cucurbita argyrosperma subsp. argyrosperma]4.32e-3766.07Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
        MSKR RSSE +V LRV++NR P+ ++ S+ G   SGS SD+SVE+SCL  W+G VEE+  I+TRSMMLVGCPGCFMYVMLT+KSSQCPKC NNVFLDFF 
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN

Query:  ------QQKHHA
              QQ+HHA
Subjt:  ------QQKHHA

KAG7035922.1 hypothetical protein SDJN02_02722, partial [Cucurbita argyrosperma subsp. argyrosperma]4.17e-6698.11Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
        MSKRPRSSE EVALRVDMNRSPTTSSMSMFGGSESG GSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN

Query:  QQKHHA
        QQKHHA
Subjt:  QQKHHA

KGN48041.1 hypothetical protein Csa_002820 [Cucumis sativus]2.08e-3869.3Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPT----TSSMSMFGGSESGSGSDVSVESSCLSL----WDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKN
        MSKR RSSE EV LRV++NRSPT    +SS+S F GS SGS S++SV +SCLS       G +EE   I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKN
Subjt:  MSKRPRSSEIEVALRVDMNRSPT----TSSMSMFGGSESGSGSDVSVESSCLSL----WDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKN

Query:  NVFLDFFNQQKHHA
        NVFLDFF QQ HHA
Subjt:  NVFLDFFNQQKHHA

TrEMBL top hitse value%identityAlignment
A0A0A0KJX5 Uncharacterized protein1.01e-3869.3Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPT----TSSMSMFGGSESGSGSDVSVESSCLSL----WDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKN
        MSKR RSSE EV LRV++NRSPT    +SS+S F GS SGS S++SV +SCLS       G +EE   I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKN
Subjt:  MSKRPRSSEIEVALRVDMNRSPT----TSSMSMFGGSESGSGSDVSVESSCLSL----WDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKN

Query:  NVFLDFFNQQKHHA
        NVFLDFF QQ HHA
Subjt:  NVFLDFFNQQKHHA

A0A0L9V640 Uncharacterized protein2.58e-1646.23Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD
        MSKR RS  +EV+L +   R+ ++ S S      S + S VSV   ESSC+S    E EE     TR+M+LVGCP C MYVML++   +CPKCK+ V LD
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD

Query:  FFNQQK
        F N ++
Subjt:  FFNQQK

A0A0S3SBW0 Uncharacterized protein2.58e-1646.23Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD
        MSKR RS  +EV+L +   R+ ++ S S      S + S VSV   ESSC+S    E EE     TR+M+LVGCP C MYVML++   +CPKCK+ V LD
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD

Query:  FFNQQK
        F N ++
Subjt:  FFNQQK

A0A1S3VZ34 uncharacterized protein LOC1067799139.08e-1747.17Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD
        MSKR RS  +EV+L +   R+ ++ S S      S S S VSV   ESSC+S    E EE     TR+M+LVGCP C MYVML++   +CPKCK+ V LD
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSV---ESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLD

Query:  FFNQQK
        F N ++
Subjt:  FFNQQK

A0A5D3BBS4 Uncharacterized protein1.24e-3668.42Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSS----MSMFGGSESGSGSDVSVESSCLSLWDGEVEED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNN
        MSKR RSSE EV LRV++N+SPTTSS    +S FGGS SGSG       SCLS  +GE +     E I+TRSMMLVGCPGCFMYVMLT+KSSQCPKCKNN
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSS----MSMFGGSESGSGSDVSVESSCLSLWDGEVEED---EMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNN

Query:  VFLDFFNQQ-KHHA
        VFLDFF QQ +HHA
Subjt:  VFLDFFNQQ-KHHA

SwissProt top hitse value%identityAlignment
Q9FMS4 Protein salt-induced and EIN3/EIL1-dependent 15.9e-0439.34Show/hide
Query:  SDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF
        S +  ESS  SL   E E       +SM++VGCP C MY++ + +   +CP+C ++V LDF
Subjt:  SDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF

Q9FNI1 Protein GL2-INTERACTING REPRESSOR 12.5e-1042.16Show/hide
Query:  LRVDMNRSPTTSSMSMF--GGSESGSGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKH
        L + +N SP TSS        S S + S  S  SSC+S    E+ +DE  V       T SM+LVGCP C MYVML++   +CPKCK+ V LDF ++   
Subjt:  LRVDMNRSPTTSSMSMF--GGSESGSGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKH

Query:  HA
        +A
Subjt:  HA

Q9SRN4 Protein GL2-INTERACTING REPRESSOR 24.2e-1039.6Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
        MS+R ++      L + +N SP  S  S      S + S+ +  SSC+S    E  ++E     SM+LVGCP C MYVML+D   +CPKCK+ V LDF  
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN

Query:  Q
        +
Subjt:  Q

Arabidopsis top hitse value%identityAlignment
AT3G11600.1 unknown protein3.0e-1139.6Show/hide
Query:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN
        MS+R ++      L + +N SP  S  S      S + S+ +  SSC+S    E  ++E     SM+LVGCP C MYVML+D   +CPKCK+ V LDF  
Subjt:  MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFN

Query:  Q
        +
Subjt:  Q

AT5G06270.1 unknown protein1.8e-1142.16Show/hide
Query:  LRVDMNRSPTTSSMSMF--GGSESGSGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKH
        L + +N SP TSS        S S + S  S  SSC+S    E+ +DE  V       T SM+LVGCP C MYVML++   +CPKCK+ V LDF ++   
Subjt:  LRVDMNRSPTTSSMSMF--GGSESGSGSDVSVESSCLSLWDGEVEEDEMIV-------TRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKH

Query:  HA
        +A
Subjt:  HA

AT5G22270.1 unknown protein4.2e-0539.34Show/hide
Query:  SDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF
        S +  ESS  SL   E E       +SM++VGCP C MY++ + +   +CP+C ++V LDF
Subjt:  SDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLT-DKSSQCPKCKNNVFLDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGCAAGAGACCGAGAAGTAGCGAGATCGAGGTCGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATC
GGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTCGGGTGTCCGGGGT
GCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAATGTGTTTCTTGATTTCTTCAACCAACAAAAACATCATGCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGCAAGAGACCGAGAAGTAGCGAGATCGAGGTCGCCTTGAGAGTGGACATGAACCGCTCGCCAACGACCTCGTCGATGAGCATGTTTGGAGGATCAGAGTCGGGATC
GGGATCGGATGTGTCGGTGGAGAGTTCTTGCTTGTCGTTGTGGGATGGGGAAGTGGAGGAGGACGAGATGATAGTAACGAGATCGATGATGCTTGTCGGGTGTCCGGGGT
GCTTCATGTACGTGATGCTGACCGACAAGAGCTCCCAATGTCCCAAATGCAAGAACAATGTGTTTCTTGATTTCTTCAACCAACAAAAACATCATGCCTAG
Protein sequenceShow/hide protein sequence
MSKRPRSSEIEVALRVDMNRSPTTSSMSMFGGSESGSGSDVSVESSCLSLWDGEVEEDEMIVTRSMMLVGCPGCFMYVMLTDKSSQCPKCKNNVFLDFFNQQKHHA