; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG06g02230 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG06g02230
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionNADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial
Genome locationCp4.1LG06:1244611..1248474
RNA-Seq ExpressionCp4.1LG06g02230
SyntenyCp4.1LG06g02230
Gene Ontology termsGO:0009060 - aerobic respiration (biological process)
GO:0015990 - electron transport coupled proton transport (biological process)
GO:0022900 - electron transport chain (biological process)
GO:0032981 - mitochondrial respiratory chain complex I assembly (biological process)
GO:0005747 - mitochondrial respiratory chain complex I (cellular component)
GO:0008137 - NADH dehydrogenase (ubiquinone) activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0048038 - quinone binding (molecular function)
GO:0051539 - 4 iron, 4 sulfur cluster binding (molecular function)
InterPro domainsIPR006137 - NADH:ubiquinone oxidoreductase-like, 20kDa subunit
IPR006138 - NADH-ubiquinone oxidoreductase, 20 Kd subunit


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7024337.1 hypothetical protein SDJN02_13151 [Cucurbita argyrosperma subsp. argyrosperma]2.05e-15299.53Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPT YARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

XP_022936396.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita moschata]1.24e-153100Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

XP_022977107.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita maxima]5.04e-15399.53Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARG FSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

XP_022982415.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like [Cucurbita maxima]6.60e-14997.17Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGAFSLHTTAP LSSSS+ASPTPYA P PPST SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

XP_038897936.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Benincasa hispida]9.38e-14997.17Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPY RP PPS SSPTGLPKAAEYVISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFL WWTK
Subjt:  NRRKDFLHWWTK

TrEMBL top hitse value%identityAlignment
A0A0A0L3Y8 Oxidored_q6 domain-containing protein9.16e-14997.17Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGA SLHTTAPALSSSSTASPTPYARP PPS SSPTGLPKAAEYVISKVDDL+NWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFL WWTK
Subjt:  NRRKDFLHWWTK

A0A6J1F7C6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial5.99e-154100Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

A0A6J1FRF4 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like2.63e-14896.7Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGA SLHTTAP LSSSS+ASPTPYA P PPST SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

A0A6J1IHI6 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial2.44e-15399.53Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARG FSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

A0A6J1J2L0 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like3.20e-14997.17Show/hide
Query:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
        MAAVSRASTRIPHLLAARGAFSLHTTAP LSSSS+ASPTPYA P PPST SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY
Subjt:  MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARY

Query:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
        DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI
Subjt:  DLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI

Query:  NRRKDFLHWWTK
        NRRKDFLHWWTK
Subjt:  NRRKDFLHWWTK

SwissProt top hitse value%identityAlignment
O21272 NADH-ubiquinone oxidoreductase 20 kDa subunit4.3e-7883.66Show/hide
Query:  EYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYY
        E+++SK+D+L+NWAR+GS+WPMTFGLACCAVEMMH+ A+RYDLDRFG+IFRPSPRQSD MIVAGTLTNKMAPALRKVYDQM EPRWV+SMGSCANGGGYY
Subjt:  EYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYY

Query:  HYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK
        HYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQLQKKI R +  L+W  K
Subjt:  HYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK

P42026 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial1.4e-7671.72Show/hide
Query:  AARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKA-AEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPR
        AA     +H++  A S SST      AR   P    P  LP +  EYV++K+DDL+NWARR S+WPMTFGLACCAVEMMH  A RYD+DRFGV+FR SPR
Subjt:  AARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKA-AEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPR

Query:  QSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK
        QSD MIVAGTLTNKMAPALRKVYDQMPEPR+V+SMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKI R K    W+ +
Subjt:  QSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK

P42027 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial5.7e-9982.03Show/hide
Query:  MAAVSR-ASTRIPHLLAARGAFS---LHTTAPALSSSSTASPTPYARPPPPSTSS-PTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHT
        MA ++R  +TR+P +L +  A +   LHT+ PALS ++T  PT Y RP PPSTS+ P GL K AE+VISKVDDL+NWARRGSIWPMTFGLACCAVEMMHT
Subjt:  MAAVSR-ASTRIPHLLAARGAFS---LHTTAPALSSSSTASPTPYARPPPPSTSS-PTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHT

Query:  GAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQ
        GAARYDLDRFG+IFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG+LQ
Subjt:  GAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQ

Query:  LQKKINRRKDFLHWWTK
        LQKKINRRKDFLHWW K
Subjt:  LQKKINRRKDFLHWWTK

Q42577 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial4.4e-9982.27Show/hide
Query:  MAAVSR-ASTRIPHLL------AARGAFSLHTTAPALSSSSTASPTPYARPPPPSTS-SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEM
        MA ++R  +TR+P LL      AA     LHT+ PALS S+  SPT Y RP PPSTS  P GL KAAE+VISKVDDL+NWAR GSIWPMTFGLACCAVEM
Subjt:  MAAVSR-ASTRIPHLL------AARGAFSLHTTAPALSSSSTASPTPYARPPPPSTS-SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEM

Query:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYG
        MHTGAARYDLDRFG+IFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG
Subjt:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYG

Query:  ILQLQKKINRRKDFLHWWTK
        +LQLQKKINRRKDFLHWW K
Subjt:  ILQLQKKINRRKDFLHWWTK

Q43844 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial2.7e-9383.42Show/hide
Query:  AFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCM
        A ++HTT P+LS    +SP       PPS ++P G+ K AEYVISKVDDL+NWARRGSIWPMTFGLACCAVEMMH GAARYD DRFG+IFRPSPRQSD M
Subjt:  AFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCM

Query:  IVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK
        IVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKD L WWT+
Subjt:  IVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK

Arabidopsis top hitse value%identityAlignment
AT5G11770.1 NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial3.1e-10082.27Show/hide
Query:  MAAVSR-ASTRIPHLL------AARGAFSLHTTAPALSSSSTASPTPYARPPPPSTS-SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEM
        MA ++R  +TR+P LL      AA     LHT+ PALS S+  SPT Y RP PPSTS  P GL KAAE+VISKVDDL+NWAR GSIWPMTFGLACCAVEM
Subjt:  MAAVSR-ASTRIPHLL------AARGAFSLHTTAPALSSSSTASPTPYARPPPPSTS-SPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEM

Query:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYG
        MHTGAARYDLDRFG+IFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSY+VVRGCDRIVPVDIYVPGCPPTAEALLYG
Subjt:  MHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYG

Query:  ILQLQKKINRRKDFLHWWTK
        +LQLQKKINRRKDFLHWW K
Subjt:  ILQLQKKINRRKDFLHWWTK

ATCG00430.1 photosystem II reaction center protein G7.3e-4147.89Show/hide
Query:  VISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY
        + + ++DL NW+R  S+WP+ +G +CC +E      +R+D DR+G++ R SPRQ+D ++ AGT+T KMAP+L ++Y+QMPEP++VI+MG+C   GG +  
Subjt:  VISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHY

Query:  -SYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINR
         SY+ VRG D+++PVD+Y+PGCPP  EA++  I +L+KKI R
Subjt:  -SYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCCGTGAGCCGAGCTTCCACTCGCATCCCTCATCTGCTTGCTGCACGGGGAGCTTTTTCTCTTCATACCACTGCCCCAGCTTTGTCTTCTTCGTCGACCGCCTC
TCCGACACCGTATGCTAGGCCGCCGCCTCCTTCGACCTCGTCCCCGACGGGGCTTCCCAAAGCGGCTGAGTATGTGATCTCGAAGGTTGATGACCTCTTGAACTGGGCTC
GCCGCGGCTCTATCTGGCCCATGACATTCGGCCTTGCTTGTTGCGCCGTTGAAATGATGCACACTGGTGCTGCCCGCTACGACCTTGATCGCTTCGGTGTCATCTTCCGT
CCCAGCCCTAGGCAATCTGACTGCATGATTGTTGCTGGTACCCTCACCAACAAGATGGCCCCAGCTCTTCGAAAGGTTTATGATCAAATGCCAGAACCACGGTGGGTTAT
ATCCATGGGAAGCTGTGCAAATGGTGGTGGATACTATCACTACTCGTACGCAGTGGTTCGGGGTTGCGACCGGATTGTCCCTGTCGATATCTATGTTCCTGGTTGCCCTC
CTACTGCTGAGGCATTACTCTACGGAATTCTTCAGTTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCATTGGTGGACCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTAGAGCCAATAGCGCGCCACGTGAACAGACGACGTTGGTAATTAGGAATAATACCGATTCGCGGATTTTTGGTTCTCATTTTCCATTTCGGTCTGTATCGGAAGTTC
TGAATCTTGATCCGTGGCAATGGCCGCCGTGAGCCGAGCTTCCACTCGCATCCCTCATCTGCTTGCTGCACGGGGAGCTTTTTCTCTTCATACCACTGCCCCAGCTTTGT
CTTCTTCGTCGACCGCCTCTCCGACACCGTATGCTAGGCCGCCGCCTCCTTCGACCTCGTCCCCGACGGGGCTTCCCAAAGCGGCTGAGTATGTGATCTCGAAGGTTGAT
GACCTCTTGAACTGGGCTCGCCGCGGCTCTATCTGGCCCATGACATTCGGCCTTGCTTGTTGCGCCGTTGAAATGATGCACACTGGTGCTGCCCGCTACGACCTTGATCG
CTTCGGTGTCATCTTCCGTCCCAGCCCTAGGCAATCTGACTGCATGATTGTTGCTGGTACCCTCACCAACAAGATGGCCCCAGCTCTTCGAAAGGTTTATGATCAAATGC
CAGAACCACGGTGGGTTATATCCATGGGAAGCTGTGCAAATGGTGGTGGATACTATCACTACTCGTACGCAGTGGTTCGGGGTTGCGACCGGATTGTCCCTGTCGATATC
TATGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTCTACGGAATTCTTCAGTTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCATTGGTGGACCAAGTGAGA
CCATCCATCCAAGTCGACTATTGGACGTTGGTGGATTCTTGGAAGTATAATAAGCTATATTACAAGGTTTGTGGAAATGAAATAGAAGATTATGAGTGATATTTCAATAA
GACCCCATAACTGAGATCGCCCTTGATGATGGTTTTTTTTCTCTGTTATTCTGGAGGCAAAGAATTATGTGCCTCCTTCAACTCTGGAGTTTTCTCATGCTTCCTGATTT
TTTCAACTCAATTTAATGTCTTCTGATTATTGTTAATGACGTTTATCAATTTCTCCTCCCAAATTTTAATCCCGTAAGTAACCGC
Protein sequenceShow/hide protein sequence
MAAVSRASTRIPHLLAARGAFSLHTTAPALSSSSTASPTPYARPPPPSTSSPTGLPKAAEYVISKVDDLLNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFR
PSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYAVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLHWWTK