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Cp4.1LG06g03280 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG06g03280
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionUnknown protein
Genome locationCp4.1LG06:1822661..1825190
RNA-Seq ExpressionCp4.1LG06g03280
SyntenyCp4.1LG06g03280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591561.1 hypothetical protein SDJN03_13907, partial [Cucurbita argyrosperma subsp. sororia]5.20e-1397.22Show/hide
Query:  ALVAESAIHGFDLREKSDIELHLSFAGMISIHAYER
        AL AESAIHGFDLREKSDIELHLSFAGMISIHAYER
Subjt:  ALVAESAIHGFDLREKSDIELHLSFAGMISIHAYER
KAG7024450.1 hypothetical protein SDJN02_13265 [Cucurbita argyrosperma subsp. argyrosperma]7.02e-8095.83Show/hide
Query:  MNLWKHSQRRIFHGQLWVRNMILLMRHTTFIMLMLRHWALVAESAIHGFDLREKSDIELHLSFAGMISIHAYERLPMDDSFICTIPWKFKQLLTLLVSSY
        MNLWKHSQRRIFHGQLWVRNMILLMRHTTFIMLMLR+WAL AESAIHGFDLREKSDIELHLSFAGMISIHAYERLPMDDSFICTIPWKFKQ LTLLVSSY
Subjt:  MNLWKHSQRRIFHGQLWVRNMILLMRHTTFIMLMLRHWALVAESAIHGFDLREKSDIELHLSFAGMISIHAYERLPMDDSFICTIPWKFKQLLTLLVSSY

Query:  WIYYGHPIEVETINPCSCFH
        WIYYGHPIEVETINPCS  H
Subjt:  WIYYGHPIEVETINPCSCFH
TrEMBL top hitse value%identityAlignment
A0A0A0LDN7 Uncharacterized protein2.41e-1554.65Show/hide
Query:  VCLNSQPVFDYCDMYMMNLW------KHSQRRIFHGQLWVRNMILLMRHTTFIMLMLRHWALVAESAIHGFDLREKSDIELHLSFA
        V L+   V +   M M+ LW      KHSQ RI H QLWV N+IL MR  TF M MLR WAL +ES IHGF LR+K+DIEL+L+ A
Subjt:  VCLNSQPVFDYCDMYMMNLW------KHSQRRIFHGQLWVRNMILLMRHTTFIMLMLRHWALVAESAIHGFDLREKSDIELHLSFA
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTATGGAGGAAGTTTGTCTTAACAGCCAGCCTGTCTTTGATTATTGTGACATGTATATGATGAATCTATGGAAGCACAGTCAAAGAAGAATCTTCCACGGCCAACT
GTGGGTTCGGAATATGATTCTTTTGATGAGGCATACGACTTTTATAATGCTTATGCTAAGGCACTGGGCTTTGGTAGCAGAGTCAGCAATTCATGGTTTCGATCTAAGAG
AAAAGAGCGACATAGAGCTACACTTATCATTTGCAGGAATGATCTCTATCCATGCATATGAGAGGCTACCTATGGATGATAGCTTTATATGCACAATTCCGTGGAAGTTT
AAGCAACTCCTTACCTTACTTGTGAGCTCATATTGGATCTATTATGGTCATCCCATTGAAGTTGAGACCATAAATCCTTGCAGTTGTTTCCACTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTATGGAGGAAGTTTGTCTTAACAGCCAGCCTGTCTTTGATTATTGTGACATGTATATGATGAATCTATGGAAGCACAGTCAAAGAAGAATCTTCCACGGCCAACT
GTGGGTTCGGAATATGATTCTTTTGATGAGGCATACGACTTTTATAATGCTTATGCTAAGGCACTGGGCTTTGGTAGCAGAGTCAGCAATTCATGGTTTCGATCTAAGAG
AAAAGAGCGACATAGAGCTACACTTATCATTTGCAGGAATGATCTCTATCCATGCATATGAGAGGCTACCTATGGATGATAGCTTTATATGCACAATTCCGTGGAAGTTT
AAGCAACTCCTTACCTTACTTGTGAGCTCATATTGGATCTATTATGGTCATCCCATTGAAGTTGAGACCATAAATCCTTGCAGTTGTTTCCACTAAAATTCTCAACGCCC
TCAATAGTAGTCTTTGCTCTAGCTTTTAATTGAAGACTTGCTACCCATATAGTATATGGGCCCTCTTATATTCATTATGGTTACGTTGGATATGTGGACTTTATAGTAGA
TAATGCATGCATATAATTATTTGGTTTATAAATAGTGACACAGTTGTACGTAAGAGTGTATTATAGGTCTCTTAACAAATATGTCAACTATATAGGAGGTGCCCTAC
Protein sequenceShow/hide protein sequence
MAMEEVCLNSQPVFDYCDMYMMNLWKHSQRRIFHGQLWVRNMILLMRHTTFIMLMLRHWALVAESAIHGFDLREKSDIELHLSFAGMISIHAYERLPMDDSFICTIPWKF
KQLLTLLVSSYWIYYGHPIEVETINPCSCFH