; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG07g03260 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG07g03260
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionPoly(A)-specific ribonuclease
Genome locationCp4.1LG07:2052553..2053365
RNA-Seq ExpressionCp4.1LG07g03260
SyntenyCp4.1LG07g03260
Gene Ontology termsGO:0043928 - exonucleolytic catabolism of deadenylated mRNA (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0000932 - P-body (cellular component)
GO:0005634 - nucleus (cellular component)
GO:0030015 - CCR4-NOT core complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585497.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. sororia]3.19e-192100Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYA
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYA
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYA

KAG7020412.1 putative CCR4-associated factor 1-like 7, partial [Cucurbita argyrosperma subsp. argyrosperma]2.32e-18999.62Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGV
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAG+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGV

XP_022132308.1 probable CCR4-associated factor 1 homolog 7 [Momordica charantia]1.46e-18492.54Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVW+ NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDYNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFN   DIFASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ V WVTFHSGYDFGYLLKLLTCR LP+TQAGFF+LI IYFP++YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVE
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGST+KYAGVLYGLGVE
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVE

XP_022951691.1 probable CCR4-associated factor 1 homolog 7 [Cucurbita moschata]6.14e-201100Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE

XP_038885551.1 probable CCR4-associated factor 1 homolog 7 [Benincasa hispida]1.53e-18693.31Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVW+ANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIND+NY+TLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFN  NDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDV WVTFHSGYDFGYLLKLLTCR LP  QAGFFELI +YFPV+YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGS QKYAGVLYGLGV++
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

TrEMBL top hitse value%identityAlignment
A0A0A0LMH2 Poly(A)-specific ribonuclease9.65e-18391.45Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVW+ANLEEEFALIR IVD+FNYIAMDTEFPGVVLRPLG FKNIND+NY+TLK NV+ LKLIQLGLTFSDE+GNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFN  +DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN+DV WVTFHSGYDFGYLLKLLTCR LP  QAGFFELI +YFPVLYDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGS QKYAGVLYGLGVE+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

A0A6J1BVW9 Poly(A)-specific ribonuclease7.09e-18592.54Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVW+ NLEEEFALIREIVDEFNYIAMDTEFPGVVLRP+GAFKNINDYNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFN   DIFASDSIELLRQCGIDF+KNNEEGIDVNRFGELLMSSGVVLN+ V WVTFHSGYDFGYLLKLLTCR LP+TQAGFF+LI IYFP++YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVE
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLR TFFNGST+KYAGVLYGLGVE
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVE

A0A6J1GI81 Poly(A)-specific ribonuclease2.97e-201100Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE

A0A6J1HCG0 Poly(A)-specific ribonuclease2.37e-18391.82Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVW+ NLEEEFALIREIVD+FNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLK NVD LKLIQLGLTFSDENGNLPTCGTD FCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFN ++DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLN DV WVTFHSGYDFGYLLKLLTCR LPE Q GFF+LI +YFPV+YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTA TFRKLR TFFNGS QKYAGVLYGLGVE+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

A0A6J1KTM7 Poly(A)-specific ribonuclease2.97e-201100Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
        KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE

SwissProt top hitse value%identityAlignment
Q3ZC01 CCR4-NOT transcription complex subunit 73.8e-7956.92Show/hide
Query:  SIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNT
        S +I EVW  NL+EE   IR+++ ++NY+AMDTEFPGVV RP+G F++  DY YQ L+ NVD LK+IQLGLTF +E G  P  GT     WQFNF+ FN 
Subjt:  SIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNT

Query:  INDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMKFCN
          D++A DSIELL   GI F+K+ EEGI+   F ELLM+SGVVL   V W++FHSGYDFGYL+K+LT   LPE +  FFE+++++FPV+YD+K+LMK C 
Subjt:  INDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMKFCN

Query:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNG--STQKYAGVLYGLG
        +L GGL ++AE LE+ERIG  HQAGSDSLLT   F K+R  FF       KY G LYGLG
Subjt:  SLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNG--STQKYAGVLYGLG

Q9LEU4 Probable CCR4-associated factor 1 homolog 103.7e-11976.14Show/hide
Query:  KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSI IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TLK NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMK
        FN   DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA FF+L+ +YFP +YDIKHLM 
Subjt:  FNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL+  +F GST+KY GVLYGLGVED
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

Q9S9P2 Probable CCR4-associated factor 1 homolog 22.2e-9563.26Show/hide
Query:  DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF
        D+I+IREVW+ NLE+E ALI + +D+F Y+AMDTEFPG+V + + A  N N      +YNY TLK+NV+ LKLIQLGLT SDE GNLPTCGT+K CIWQF
Subjt:  DSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNIN------DYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQF

Query:  NFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIK
        NFREFN I+D+FA DSIELLR+  ID +KNNE G+D  RF ELLM SGVVLN+ + WVTFH GYDFGYLLKLL+ + LPE  + FF+ ++ +FPV+YDIK
Subjt:  NFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIK

Query:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGL
        +LM FC +L+GGL K+AELL V+R+G+ HQAGSDSLLT  TF K++  FF GS  KY+G L+GL
Subjt:  HLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGL

Q9SAI2 Probable CCR4-associated factor 1 homolog 68.3e-11973.23Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREF+  +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF+LI +YFP +YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G   KY+GVLYGLGVE+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

Q9SKZ2 Probable CCR4-associated factor 1 homolog 71.4e-12175.56Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K DSIQIREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYD
        QFNFREF+  +DI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LPETQ GFFE+I +YFP +YD
Subjt:  QFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL+  FF GS +KY+GVLYGLGVE+
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.9e-12073.23Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREF+  +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF+LI +YFP +YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G   KY+GVLYGLGVE+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein5.9e-12073.23Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREF+  +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF+LI +YFP +YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G   KY+GVLYGLGVE+
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.2e-12073.33Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ
        MS+  K DSIQIREVW+ NL+EE  LIR++VD+F Y+AMDTEFPG+V+RP+G FK+  DY+Y+TLK+NV+ LK+IQLGLTFS+E GNLPTCGTDK+CIWQ
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQ

Query:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI
        FNFREF+  +DIFA DSIELL+Q GID  KN  +GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LP++Q  FF+LI +YFP +YDI
Subjt:  FNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDI

Query:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE
        KHLMKFCNSLHGGLNKLAELLEVER+G+CHQAGSDSLLT+CTFRKL+  FF G   KY+GVLYGLGVE+E
Subjt:  KHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein9.7e-12375.56Show/hide
Query:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW
        MS+  K DSIQIREVW+ NLE E ALIRE+VD+F ++AMDTEFPG+V RP+G FK   +Y+Y+TLK+NV+ LK+IQLGLTFSDE GNLPTCGTD K+CIW
Subjt:  MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTD-KFCIW

Query:  QFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYD
        QFNFREF+  +DI+A+DSIELLRQ GIDF KNNE GID  RF ELLMSSG+VLN +V WVTFHSGYDFGYLLKLLTC+ LPETQ GFFE+I +YFP +YD
Subjt:  QFNFREFNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYD

Query:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        IKHLMKFCNSLHGGLNKLAELL+VER+G+CHQAGSDSLLT+CTFRKL+  FF GS +KY+GVLYGLGVE+
Subjt:  IKHLMKFCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED

AT5G10960.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.6e-12076.14Show/hide
Query:  KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE
        K DSI IREVWD NL EEFALIREIVD+F+YIAMDTEFPGVVL+P+  FK  ND NY+TLK NVD LKLIQ+GLTFSDENGNLPTCGTDKFCIWQFNFRE
Subjt:  KGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFRE

Query:  FNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMK
        FN   DI+AS+SIELLRQCGIDF+KN E+GIDV RFGEL+MSSG+VLN+ + WVTFH GYDFGYL+KLLTC+ LP  QA FF+L+ +YFP +YDIKHLM 
Subjt:  FNTINDIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMK

Query:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED
        FCN L GGLN+LAEL+ VER+G+CHQAGSDSLLT  +FRKL+  +F GST+KY GVLYGLGVED
Subjt:  FCNSLHGGLNKLAELLEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVED


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGACGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACAT
AGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAAT
GATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGG
CCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTA
CTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAA
ATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAG
mRNA sequenceShow/hide mRNA sequence
ATGTCGATTTTACCCAAAGGCGATTCGATTCAAATCCGTGAGGTCTGGGACGCCAATTTAGAAGAGGAGTTTGCGCTTATCCGTGAAATTGTTGATGAGTTTAATTACAT
AGCCATGGATACTGAGTTCCCCGGCGTTGTGCTTCGACCGCTTGGTGCTTTCAAGAATATCAACGACTACAACTACCAAACTCTCAAGAGTAATGTTGATACTTTGAAGT
TGATTCAATTGGGTCTTACGTTTTCTGATGAGAATGGAAATCTTCCAACTTGTGGAACGGATAAGTTTTGCATTTGGCAGTTCAATTTCCGTGAGTTCAATACTATTAAT
GATATTTTTGCTAGTGATTCCATTGAACTTCTGCGCCAGTGTGGTATTGATTTTCAGAAGAACAACGAAGAGGGTATCGATGTTAATCGATTTGGTGAGCTTCTAATGTC
TTCTGGGGTTGTGTTGAACAATGATGTTATCTGGGTTACGTTCCACAGTGGGTATGATTTTGGTTACTTGCTGAAATTGCTGACTTGCCGAGCCTTACCCGAAACGCAGG
CCGGGTTTTTTGAGCTCATCAAGATCTATTTTCCAGTGCTCTATGATATCAAGCATTTGATGAAGTTCTGCAACAGTCTCCATGGTGGGTTGAACAAACTTGCAGAATTA
CTAGAAGTGGAGAGGATTGGAGTTTGTCATCAAGCAGGATCAGATAGTCTGCTCACTGCTTGTACTTTTAGGAAGTTGAGGGGCACCTTTTTCAATGGTTCTACGCAGAA
ATACGCAGGTGTTTTATACGGTCTCGGTGTCGAAGATGAATAG
Protein sequenceShow/hide protein sequence
MSILPKGDSIQIREVWDANLEEEFALIREIVDEFNYIAMDTEFPGVVLRPLGAFKNINDYNYQTLKSNVDTLKLIQLGLTFSDENGNLPTCGTDKFCIWQFNFREFNTIN
DIFASDSIELLRQCGIDFQKNNEEGIDVNRFGELLMSSGVVLNNDVIWVTFHSGYDFGYLLKLLTCRALPETQAGFFELIKIYFPVLYDIKHLMKFCNSLHGGLNKLAEL
LEVERIGVCHQAGSDSLLTACTFRKLRGTFFNGSTQKYAGVLYGLGVEDE