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Cp4.1LG07g04480 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG07g04480
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Descriptionsuccinate dehydrogenase subunit 5, mitochondrial-like
Genome locationCp4.1LG07:2995301..2999827
RNA-Seq ExpressionCp4.1LG07g04480
SyntenyCp4.1LG07g04480
Gene Ontology termsGO:0006099 - tricarboxylic acid cycle (biological process)
GO:0045273 - respiratory chain complex II (cellular component)
InterPro domainsIPR025397 - Succinate dehydrogenase subunit 5, mitochondrial


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6585649.1 Succinate dehydrogenase subunit 5, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]3.31e-4798.75Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELKNAL+TVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
KAG7020560.1 Succinate dehydrogenase subunit 5, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]7.27e-4798.75Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLS+ELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
XP_022951155.1 succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita moschata]1.79e-4698.75Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLS+ELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
XP_023001943.1 succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita maxima]8.93e-4798.75Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELKNALQTVHDRYT+YLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
XP_023537918.1 succinate dehydrogenase subunit 5, mitochondrial-like [Cucurbita pepo subsp. pepo]3.14e-47100Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
TrEMBL top hitse value%identityAlignment
A0A6J1CRE2 succinate dehydrogenase subunit 5, mitochondrial-like isoform X26.34e-4595Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELKNAL TVHDRYT YLDAFGPEENYL+KKVETELGTKMI+LKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
A0A6J1CS25 succinate dehydrogenase subunit 5, mitochondrial-like isoform X17.95e-4595Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELKNAL TVHDRYT YLDAFGPEENYL+KKVETELGTKMI+LKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
A0A6J1GHW5 succinate dehydrogenase subunit 5, mitochondrial-like8.67e-4798.75Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLS+ELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
A0A6J1HCU3 succinate dehydrogenase subunit 5, mitochondrial-like2.13e-4495Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELK ALQTV+DRYTAYLDAFGPEENYL+KKVETELGTKMI+LKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
A0A6J1KS18 succinate dehydrogenase subunit 5, mitochondrial-like4.32e-4798.75Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        DVKPLSDELKNALQTVHDRYT+YLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
SwissProt top hitse value%identityAlignment
Q0JDA2 Succinate dehydrogenase subunit 5, mitochondrial2.0e-2666.25Show/hide
Query:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        +V PL   +++A+++ + RY  YL++FGPEENYL+KKVE ELGTKMIHLKMRCSG+GSEWGK++++GTSG+SGSYVE RA
Subjt:  DVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Q9SX77 Succinate dehydrogenase subunit 5, mitochondrial2.5e-2978.48Show/hide
Query:  VKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        VKPL +++ +AL+T + RY  YLD+F PEE YLKKKVE ELGTKMIHLKMRCSGLGSEWGKV+VLGTSGLSGSYVEQRA
Subjt:  VKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
Arabidopsis top hitse value%identityAlignment
AT1G47420.1 succinate dehydrogenase 51.8e-3078.48Show/hide
Query:  VKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA
        VKPL +++ +AL+T + RY  YLD+F PEE YLKKKVE ELGTKMIHLKMRCSGLGSEWGKV+VLGTSGLSGSYVEQRA
Subjt:  VKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETELGTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAATCCGAGGAAAAAGCGAAAGCGATGGAGAAAATGGTTGTTCTCAGATCACTATTGCGTTCTGTCCGCGCCGGATCTTACAGCATCGCCGGCGTCCGACACCGGAGT
TTACTGCAAAGTCACTACCAGGCCGCTAGGAATTTCTCCAATCTATCGTCGCCTCGTTCTTCTTTCTCAGATTCTCCTCAGAGAGTTTCTTATGGATGTTAAGCCTTTGT
CCGATGAGCTTAAGAATGCACTACAGACGGTTCATGATCGCTATACTGCCTACTTGGATGCATTTGGTCCCGAGGAAAACTATCTGAAAAAGAAAGTGGAAACAGAGTTG
GGAACAAAGATGATTCACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCAGGGTCATATGTCGAGCAAAG
AGCATAA
mRNA sequenceShow/hide mRNA sequence
ATGAATCCGAGGAAAAAGCGAAAGCGATGGAGAAAATGGTTGTTCTCAGATCACTATTGCGTTCTGTCCGCGCCGGATCTTACAGCATCGCCGGCGTCCGACACCGGAGT
TTACTGCAAAGTCACTACCAGGCCGCTAGGAATTTCTCCAATCTATCGTCGCCTCGTTCTTCTTTCTCAGATTCTCCTCAGAGAGTTTCTTATGGATGTTAAGCCTTTGT
CCGATGAGCTTAAGAATGCACTACAGACGGTTCATGATCGCTATACTGCCTACTTGGATGCATTTGGTCCCGAGGAAAACTATCTGAAAAAGAAAGTGGAAACAGAGTTG
GGAACAAAGATGATTCACTTGAAAATGAGATGCAGTGGCCTTGGATCTGAGTGGGGAAAGGTTTCTGTGCTGGGAACCTCTGGTCTATCAGGGTCATATGTCGAGCAAAG
AGCATAAATTTGGCTGTAATTGCAAGCTTCCGTTAGTTTGAGTGTATGTTCTTCAATGTTTTATTGTGCATCTTCTCTCAAAACCAATTAACCGTGGAGTTAATGGCAAT
TGAATAAGATCTCACCTTGAGGAATGAGTAAACAGAATTTAACATCCTCATTTGTTTACCAATTATTCGGTTTCTTCTACAAGTTTATATCGTCAGTTTCTAAATTTTTG
CATTTCTGAGTTTTATATCGTTCTGTGTGATCTGTGGAGGAGTCGACCTTAACTCCGATTATTGCTACAGTAACTGCGTGATTGTTATTAATAGCTTAAGTGTTAAAGCA
TATGTTTGTGAAGTAAAGAAGAGGTGAAAATTGGATATAATCAGACCACTAGCTTGGAGGTGGTCTGTTGGACTCTTCACTCCCAACATTGCCTCTACAAAAATGAAACT
TAGCACAGGATTTGGACATCAATATGTCTTTACAACTTTGGTGCCTTTATTCCATTTACTCCATGACCAAGATTCAGATGGCGACTTGGGCAGAGGAGGAAGGAACAGTG
CCTTCCTGCAAAGACCGAACGGCCATCCTTCACAATGACAAAGTTCCTGCAAGGCAGTGTGCCTCTTGAGATCTTCGTCTACAAAATCAAGACCATTTAAGCTCGAACCT
CGGGAAAAGTTGGCCTCCACAGAAAAGAATGCTTCCTTGGTTGCAGCACTTGAACAACATGTGAGAAAATCCAGGAAAAGCTGTCCGACAGGTTAGTCTTTCGTCTCAAC
TTTTCCATTGCTCGACTTCTGATTTCTGATACAATTTCCTGAGAAGAAGATAAAAAAACTTAAGAGAAACAGATTTCATATAAGATGAAAGAGAAAACAAAAGAATTAAC
TGGTGAGTACTTCCTCTTCATCGTCGAAGTCACTCGTAGGATATTTGTCCTCTGCGTTTGAATTCGGTAGCTGTCTGCTAAAAGTATGGCAGTTGCAAAATGCATCCTTC
AAAGCAGCTGCTAGAAAGGATTTCTTAGAAGGATTTGGTGGGTCTTCTTGATAAAAGACCCCCATATTTGAGAGGCTGGATTTGTTAGTTCCTTTACGAGCCAGTGACAT
ATATAGAGAAGTAATTGCACCTTACTGCCGCTCCACTTTAGGGATCAAAATGGCTCCATTTCTTACAGTGCCTTCTCAGCTTATTGAAAATAACGCTTTCTAATCCTTAG
GTGTAAAGATAAAGTAAGTAGGAACACATGACACTCCAACTAATGATGTTGAACTGCACTAGAGATTCTAGCTGAAAGCTCACACTGCATTCTCTTTACATTACTTTGAA
TATTAATTGGCCATGCTATATGCTAATCTAACACCTACTTTTCAAGGCATTTGGACTCTCACTTAATGCTCAAGATTTCGGTGATTTCAGACATTTAACCAACCAATATC
TCCTACTTTTGACAACTTTGTCGAGATCGGCCAGTTCCACTGTTCGAGCTCATGGGAGAGAAGAGTACGAAATCAAATCAACCGATCTTTAAAAGTCGGGTCTCAATCTG
GCTCTCCCAAGACTCGTGACTAGGAAGTGCATATTGGATGCTCTGTTGGAGCAGCTATATGTTTATTGATGGCGAATTTGGAGTTGTTCTCCATCATGCTTGTTACGTGA
GGCAAAGCATCTTCATACGGCTATGCTTAAAGTCCAAGATGATATTGCTCAAAATTTATTCCTACAAGATGTGATGGAGATGGAGACACCTTATCTTAAAGTAAGTTGAG
AATAATATTATTAGGTAATTCTTGACTTAAAAAATTACTTTTCTTTTCACTTTTAGTTGTTACAAAAGAATAACCTTTGCTTCGGTTAATTGTGTTAGAATTTTTAGAAA
AATGATGACTTGTCCATTCTAGTTTGTTGCTATATGCTTGTATTGTCGT
Protein sequenceShow/hide protein sequence
MNPRKKRKRWRKWLFSDHYCVLSAPDLTASPASDTGVYCKVTTRPLGISPIYRRLVLLSQILLREFLMDVKPLSDELKNALQTVHDRYTAYLDAFGPEENYLKKKVETEL
GTKMIHLKMRCSGLGSEWGKVSVLGTSGLSGSYVEQRA