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Cp4.1LG08g03250 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG08g03250
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionAcidic leucine-rich nuclear phosphoprotein 32-related protein 2
Genome locationCp4.1LG08:2189922..2191183
RNA-Seq ExpressionCp4.1LG08g03250
SyntenyCp4.1LG08g03250
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582410.1 hypothetical protein SDJN03_22412, partial [Cucurbita argyrosperma subsp. sororia]4.08e-4583.16Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD   GED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
KAG6597344.1 hypothetical protein SDJN03_10524, partial [Cucurbita argyrosperma subsp. sororia]9.13e-5797.8Show/hide
Query:  MGGDSKDVEETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDSKDVEE VDSVAAGEVGDSG GEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
Subjt:  MGGDSKDVEETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
XP_004134046.1 uncharacterized protein LOC101205158 [Cucumis sativus]1.25e-4684.95Show/hide
Query:  GDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        GDSKDV    E+T+DS AAGEVGD   GE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
XP_022924268.1 uncharacterized protein LOC111431793 [Cucurbita moschata]7.01e-4683.16Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD   GED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
XP_038897861.1 uncharacterized protein LOC120085750 [Benincasa hispida]8.52e-4783.16Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        M GDSKDV    E+ +DS A GEVGD   GE+YSESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
TrEMBL top hitse value%identityAlignment
A0A0A0L701 Uncharacterized protein6.04e-4784.95Show/hide
Query:  GDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        GDSKDV    E+T+DS AAGEVGD   GE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSCIIM
Subjt:  GDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
A0A1S3AX40 uncharacterized protein LOC103483558 isoform X21.39e-4383.52Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
        M GDSKDV    E+T+DS AAGEVGD   GE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
A0A5A7U1V8 Uncharacterized protein1.39e-4383.52Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
        M GDSKDV    E+T+DS AAGEVGD   GE+YSESNALLPPRRGGMSRK NKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCS
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCS
A0A6J1EBY1 uncharacterized protein LOC1114317933.39e-4683.16Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD   GED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
A0A6J1INK9 uncharacterized protein LOC1114791205.00e-4582.11Show/hide
Query:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        MGGDS+ V    E +VDS AAGEVGD    ED SESNALLPPRRGGMSRKSNKPRMKVRW DSNGNNLAEILEFQPSDVSDSGDEE DSCSC+IM
Subjt:  MGGDSKDV----EETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34010.1 unknown protein5.2e-0446.67Show/hide
Query:  RMKVRWTDSNGNNLAEILEFQPSDVSDSGDE----EDDSCSCIIM
        R KV+W D+ G  +AE+ EF+PS+V +S DE       SC C IM
Subjt:  RMKVRWTDSNGNNLAEILEFQPSDVSDSGDE----EDDSCSCIIM
AT1G55475.1 unknown protein3.1e-0444.19Show/hide
Query:  KPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        + + KV+W D  G  LAEI EF+PSD  D   +   +C CII+
Subjt:  KPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
AT2G33390.1 unknown protein1.7e-1547.56Show/hide
Query:  ETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM
        + + S+ + E+ D    E+ SES  LLPPR+GGMSR ++K +  V+W D  G+NLAE+L ++PS+VSD+ D++ DSC C IM
Subjt:  ETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTGGCGATTCTAAGGATGTTGAGGAGACTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAAAGGCGAAGATTACAGTGAATCGAATGCTCTATTGCC
GCCCCGGCGTGGCGGAATGTCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGCG
ATGTGAGCGACTCGGGGGACGAGGAGGATGATTCTTGCAGCTGTATAATTATGTAG
mRNA sequenceShow/hide mRNA sequence
CAAAGTAAACGCCTTCTTGTATCGTTGTTTTAATTCCTTCTCCGATCTCGACAGCGCACCGCTCCATCGCCCATTTTCTCTTTGGGGTTTGGAGGCGATTTTATTTTCTG
TCACTTTCTCGGGAATCTTTCGATTCTAAGCCTTATTTTCTTTGTTTGGTTCAAATTTTAGATCGAGGGGTTTTTGATGGGGTTGTTGGGTTCGTAAATCTTGAACCCAT
GAGCCCTAACTCGGTTCTGGATTTGTGATTTTTGCGATGATTCGGTTCAGAAATCTCAAATTTGGGTTTGATTTTTGATCTTTGGTGAACTATGGGTGGCGATTCTAAGG
ATGTTGAGGAGACTGTGGATTCTGTGGCTGCCGGAGAAGTTGGGGATTCCGGTAAAGGCGAAGATTACAGTGAATCGAATGCTCTATTGCCGCCCCGGCGTGGCGGAATG
TCGAGGAAATCGAATAAGCCGAGGATGAAAGTCCGGTGGACTGATAGTAATGGTAATAATCTAGCGGAGATTTTGGAGTTTCAACCGAGCGATGTGAGCGACTCGGGGGA
CGAGGAGGATGATTCTTGCAGCTGTATAATTATGTAGATTATTACATCAAATATGTGTATAATGACAGGAAGCTGAGAGTCATTGGTGGTATTTCTGACTGTATACTGAT
TGCCTTACTACGACGACGAGTTCTCGAAGATTGACGGGTTAATATGTCGATATTCCTTGCGGTGTTTGGTGATGTGTGTTCAGGGATATCTTGTACTGTTTTGGTTTTCG
AGTTTGTAAGATCATATCGATGATGCGAATAATGATGTTATTATAACAAATATTCAGATTAGTTGAGCGTTGTACTATTGTTTATACCTCTAGATCTTGAGAGGTCGTGA
ACGTTTTTGTTTGGTTTAATAACAAATTTAGTCGATTCGTAAAAAGTTAGAATTTAGTCCCTAAAGTTTTAAATGTCATAATTAGTCTTTAAACTATACT
Protein sequenceShow/hide protein sequence
MGGDSKDVEETVDSVAAGEVGDSGKGEDYSESNALLPPRRGGMSRKSNKPRMKVRWTDSNGNNLAEILEFQPSDVSDSGDEEDDSCSCIIM