; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG09g00580 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG09g00580
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCp4.1LG09:365054..368544
RNA-Seq ExpressionCp4.1LG09g00580
SyntenyCp4.1LG09g00580
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6574206.1 Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia]1.42e-22497.31Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSAL SNRMHTLIYSFPVISKGIESVKFSLIAS  SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSG+ DKKEHSSTEELLEED+ITSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSE P EALEDESM+LKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

KAG7013270.1 Pentatricopeptide repeat-containing protein [Cucurbita argyrosperma subsp. argyrosperma]2.98e-22697.9Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIAS  SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSG+ DKKEHSSTEELLEED+ITSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSEDP EALEDESM+LKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

XP_022945794.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita moschata]6.02e-22697.9Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIAS  SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVT LGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSG+ DKKEHSSTEELLEEDEITSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSEDPDEALEDESM+LKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

XP_022968275.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita maxima]6.85e-22497.31Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASA SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVTMLG+VFQKLGMLDK EKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSG+ DKKE SSTEELLEEDE TSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSED DE LEDESMLLKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

XP_023541679.1 pentatricopeptide repeat-containing protein At4g21190 [Cucurbita pepo subsp. pepo]8.98e-233100Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein8.11e-18483.58Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        M HSL  A+LSS LAS RM TL+Y+FPV SK IESV FS   S  SSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLES+PRIFFHKMISLYY++ MHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        +FADMEELGVQP+MAIVT +GNVFQ+LGMLDKY+KL KKYPPPKWEYRYI+GKRVKIRAK L ENG+SNNG  +  K EHSST  + +E EITS+DSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDE-MSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDE MSEDPDE LEDE M  K S FEHDFMG GQL
Subjt:  DDE-MSEDPDEALEDESMLLKESTFEHDFMGFGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein2.32e-17981.79Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        M H L  A+L+S  AS RM TL+Y+FPV SK IESV FS   S  SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLE QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLFSQ+LESMPRIFFHKMISLYY+R MHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        +FADMEELGVQP+MAIVT +GN+FQ+LGMLDKYEKL KKYPPPKWEYRYI+GKRVKIR K L ENG+S NG  + +K EHSST  L +E EITS+DSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDE-MSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDE + +DPDE LEDE M  K S FEHDFMG GQL
Subjt:  DDE-MSEDPDEALEDESMLLKESTFEHDFMGFGQL

A0A6J1CI57 pentatricopeptide repeat-containing protein At4g211908.06e-18583.23Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHS V ASLSS+ ASNRM TLIYSFPVISK IESVKFS   SASS+VVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQ+LESMPR+FFHKMISLYY++ MHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        +FADMEELGVQP+  IVTM+GNVFQ+LGM DKYEKLKKKYPP KWEYRY++GKRV+IRAK L+E G+SNNGS + D+K+ SS + LLEE E  S+DSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        D+EM EDPDE LEDES L +   FE++FMG+G+L
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

A0A6J1G1Y3 pentatricopeptide repeat-containing protein At4g211902.91e-22697.9Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIAS  SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALA DGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVT LGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSG+ DKKEHSSTEELLEEDEITSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSEDPDEALEDESM+LKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

A0A6J1HWS4 pentatricopeptide repeat-containing protein At4g211903.32e-22497.31Show/hide
Query:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
        MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASA SSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI
Subjt:  MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFI

Query:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
        AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE
Subjt:  AWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFE

Query:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE
        IFADMEELGVQPSMAIVTMLG+VFQKLGMLDK EKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSG+ DKKE SSTEELLEEDE TSQDSSLE
Subjt:  IFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLE

Query:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL
        DDEMSED DE LEDESMLLKESTFEHDFMGFGQL
Subjt:  DDEMSEDPDEALEDESMLLKESTFEHDFMGFGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic7.0e-4345.18Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR
        AE LWN +   H  S+PR  F +MI+LY   D+HDK+ E+FADMEEL V P       +   F++L   +  + + ++Y   +++Y Y  G+RV+++
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR

Q8LG95 Pentatricopeptide repeat-containing protein At4g211903.4e-9863.91Show/hide
Query:  MHTLIYSFP-VISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        M +L YS P ++ +  ES         ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MHTLIYSFP-VISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIV
        LE ++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY+RDMH KLFE+FADMEELGV+P++AIV
Subjt:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIV

Query:  TMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLEDDEMSEDPDEALEDESM
        +M+G VF KL M DKYEKL KKYPPP+WE+RYI+G+RVK++AK L+E      G                +ED+I ++  S E+D   ED  E  EDE  
Subjt:  TMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLEDDEMSEDPDEALEDESM

Query:  LL
        LL
Subjt:  LL

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein5.0e-4445.18Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR
        AE LWN +   H  S+PR  F +MI+LY   D+HDK+ E+FADMEEL V P       +   F++L   +  + + ++Y   +++Y Y  G+RV+++
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein5.0e-4445.18Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR
        AE LWN +   H  S+PR  F +MI+LY   D+HDK+ E+FADMEEL V P       +   F++L   +  + + ++Y   +++Y Y  G+RV+++
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein5.0e-4445.18Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR
        AE LWN +   H  S+PR  F +MI+LY   D+HDK+ E+FADMEEL V P       +   F++L   +  + + ++Y   +++Y Y  G+RV+++
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein5.0e-4445.18Show/hide
Query:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR
        AE LWN +   H  S+PR  F +MI+LY   D+HDK+ E+FADMEEL V P       +   F++L   +  + + ++Y   +++Y Y  G+RV+++
Subjt:  AEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIR

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein2.4e-9963.91Show/hide
Query:  MHTLIYSFP-VISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        M +L YS P ++ +  ES         ++ VVCAA+GPRPR PRVWKTRKRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MHTLIYSFP-VISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIV
        LE ++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY+RDMH KLFE+FADMEELGV+P++AIV
Subjt:  LEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIV

Query:  TMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLEDDEMSEDPDEALEDESM
        +M+G VF KL M DKYEKL KKYPPP+WE+RYI+G+RVK++AK L+E      G                +ED+I ++  S E+D   ED  E  EDE  
Subjt:  TMLGNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLEDDEMSEDPDEALEDESM

Query:  LL
        LL
Subjt:  LL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGCACTCTCTTGTTCCAGCATCGCTCTCGTCCGCCTTGGCTTCCAACCGGATGCATACTTTGATTTACTCTTTTCCAGTCATATCCAAAGGGATTGAATCTGTTAA
ATTTTCGTTGATTGCAAGTGCAAGCAGTTCAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAGGAAGAGGATTGGAACCATATCCA
AGGCAGCAAAGCTTGTTGATTGTGTCAAGGGACTGTCTAACGTGAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAGTTTCCTCTTATTACT
GTAAAAAAGGCCCTGAAGACCTTAGAGATCCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGCAAAGGGCAAGGAAGAACAATGGGTAGCTATTT
CACATTATTAAATGCCTTAGCTGAAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTATTTTCTCAGCATCTGGAGAGCATGCCTCGCATATTCTTCCATA
AAATGATATCCCTTTACTATGAACGGGATATGCACGACAAGTTATTTGAGATATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAGTATGGCGATTGTCACTATGCTT
GGAAATGTCTTCCAAAAGTTGGGTATGTTAGATAAATATGAAAAATTGAAGAAGAAATATCCCCCACCGAAATGGGAATATCGTTACATAAGAGGAAAGCGCGTAAAAAT
ACGAGCAAAGAATCTGCACGAAAATGGTAGTTCCAACAATGGTTCGGGTGATTTCGACAAAAAGGAGCATAGTTCAACAGAAGAACTGTTGGAGGAAGATGAAATAACTT
CCCAAGATTCGAGTCTTGAAGATGATGAAATGAGTGAAGACCCAGATGAAGCCTTGGAAGATGAAAGTATGTTGTTGAAAGAATCCACTTTTGAGCACGATTTCATGGGA
TTTGGACAATTGTAA
mRNA sequenceShow/hide mRNA sequence
TTATTTGTTTTTTTTTTCCGGGACAATATCGACGAAGGATGAAAAGAAGAAATATGGGAAATTGAAGACATCTTACACATTTCTTCAATGGCGCACTCTCTTGTTCCAGC
ATCGCTCTCGTCCGCCTTGGCTTCCAACCGGATGCATACTTTGATTTACTCTTTTCCAGTCATATCCAAAGGGATTGAATCTGTTAAATTTTCGTTGATTGCAAGTGCAA
GCAGTTCAGTGGTATGCGCTGCAAAAGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAGGAAGAGGATTGGAACCATATCCAAGGCAGCAAAGCTTGTTGATTGT
GTCAAGGGACTGTCTAACGTGAAAGAGGAAGTCTATGGGGCTCTTGATTCCTTCATTGCCTGGGAACTAGAGTTTCCTCTTATTACTGTAAAAAAGGCCCTGAAGACCTT
AGAGATCCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGCAAAGGGCAAGGAAGAACAATGGGTAGCTATTTCACATTATTAAATGCCTTAGCTG
AAGATGGAAGACTTGATGAAGCTGAAGAGCTTTGGAACAAATTATTTTCTCAGCATCTGGAGAGCATGCCTCGCATATTCTTCCATAAAATGATATCCCTTTACTATGAA
CGGGATATGCACGACAAGTTATTTGAGATATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAGTATGGCGATTGTCACTATGCTTGGAAATGTCTTCCAAAAGTTGGG
TATGTTAGATAAATATGAAAAATTGAAGAAGAAATATCCCCCACCGAAATGGGAATATCGTTACATAAGAGGAAAGCGCGTAAAAATACGAGCAAAGAATCTGCACGAAA
ATGGTAGTTCCAACAATGGTTCGGGTGATTTCGACAAAAAGGAGCATAGTTCAACAGAAGAACTGTTGGAGGAAGATGAAATAACTTCCCAAGATTCGAGTCTTGAAGAT
GATGAAATGAGTGAAGACCCAGATGAAGCCTTGGAAGATGAAAGTATGTTGTTGAAAGAATCCACTTTTGAGCACGATTTCATGGGATTTGGACAATTGTAAGTTCAAGA
TATAGATAATGTATTCCCCATTTCAAGTTCGTCAAAATTCTCTCCCTCAATATATAGTGTACACTTTTCTCTTCTTTTCTTTCTTTCTGTAATTTTGATCATACGGGATC
ACCAGTAGCATTGTGATCATCGAGCCAATTCCCTCAATATTATAATGCCCGACCTAACATATATTTTTGTTATTGAGAGTAAATGAAAGAAAAAGAAAATGTTCTTAATA
AGTCGTAGAAGTCAATTTCATCAGCTGAGTGTGAGATAGCTGAATGTCGTGAACTAATTGCCTTCAAAAAAGGATAATAAATATGATCCGAAACTCGTGCATATTCTGTA
TTAAAGTCAATCTCATTACCGTAAAACTTCTAAAGTGGTATATAGAGAACAAAATTCTAGTGCACTATCATGTGGTAGTAGGGTAGGGAAGGGAAAGGGGTTTGGGTTGT
TGTCTCACTAAAAGAAAACAGAATTGTTTTTCATTCATCATCAGAACCAGAGCCTTCTGAACTTGAACTCTGCTGTTTATGCGCTTTTCCATTGGCAACAGGGCCCTTCT
TTTTCACATTTTGTTCATCAGCTTCATCTTCGCTGTACTCGCTCTCGTAATCATCATATTCTTCTTCATCATTTTCCTCTTCCTCTTCAATTCCATCCTCCATACTTGGT
CCTTCTTCTGCAATAAAGCCACCACGGGTACCCGCACGGGTTCGTTTTGATATCTTCAATTTCAGGTTTGTCTTGTTATCGCAACCAATCCAAGAATCACACAGGCAGTA
ACAAGTCAAATTGTAGTTCCCCTCAGCTGGGGCATGGAACTTGCCTAGAACCAATCTCGATCCCGCTTTTACCTTCTCTACCGCTTCCCTAACTGCAGCACTAGTTTCCT
TCACACTTGCTCCAGATCCCTCCATTTGTTCTTCGATTGCCTTGGAAGCTGCAGTTATGGCCGTAGCCTCATCCATGAAACTAACCTTCTGGTAAAACCAAACATTGTTT
GAATTTGGGTCTGCAAGCAGGAACCAGAAGTTTTCTTCTTTGTGAAAGGGGTAGTAGGGAGCATGTGGGAGAGCACCCACCAGCCCATTACGGCGTTCGAGTGTCACCCA
AGCCTGAATGGTGACAGTATCACCCTCTTGGATACCCTCTTCACCTTCTGTTTCACATGAGATAGTAACTGTAACGGAAGGCATCATTTCCAGCATCGTTTCAACATCTT
GTACTTCAGCAGGCGAGAAACCACCCACCTGAGCAAGCAGCTCAGCACGCTCTTCTTGAGTCAGCTTCTGAAGATCCTCAAATGCTCTCACTTTCTGC
Protein sequenceShow/hide protein sequence
MAHSLVPASLSSALASNRMHTLIYSFPVISKGIESVKFSLIASASSSVVCAAKGPRPRYPRVWKTRKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLIT
VKKALKTLEIQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFSQHLESMPRIFFHKMISLYYERDMHDKLFEIFADMEELGVQPSMAIVTML
GNVFQKLGMLDKYEKLKKKYPPPKWEYRYIRGKRVKIRAKNLHENGSSNNGSGDFDKKEHSSTEELLEEDEITSQDSSLEDDEMSEDPDEALEDESMLLKESTFEHDFMG
FGQL