; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG12g04400 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG12g04400
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionAuxin-responsive family protein
Genome locationCp4.1LG12:3679140..3679442
RNA-Seq ExpressionCp4.1LG12g04400
SyntenyCp4.1LG12g04400
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADN34225.1 auxin-responsive family protein [Cucumis melo subsp. melo]8.96e-5783.17Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR
        MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHH LY PCFR
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR

Query:  V
        V
Subjt:  V

KAE8646784.1 hypothetical protein Csa_005698 [Cucumis sativus]3.44e-5783Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV
        MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHHLY PCFR 
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV

KAG6575258.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]4.02e-6696Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV
        MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLK+AEDEYGFHQKGTITLPCH+HQFRFVQALIDQETSFH  HHHLYGPCFRV
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV

XP_011656853.1 auxin-responsive protein SAUR32 [Cucumis sativus]5.23e-5883Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV
        MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHHLY PCFR 
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV

XP_038876020.1 auxin-responsive protein SAUR32 [Benincasa hispida]8.96e-5783.17Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQH-HHLYGPCFR
        MGSGERSQG+FK VPKGCLAIKVGHE EEKQRFIVP+ Y NHPLF+QLLK+AE+EYGF QKGTIT+PCH+ QFR+VQALIDQETSFHH H HHLY PCFR
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQH-HHLYGPCFR

Query:  V
        V
Subjt:  V

TrEMBL top hitse value%identityAlignment
A0A0A0KFM7 Uncharacterized protein2.53e-5883Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV
        MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHHLY PCFR 
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV

A0A1S3CBD9 auxin-responsive protein SAUR325.07e-5682.18Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR
        MGSGE SQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHH LY PCFR
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR

Query:  V
        V
Subjt:  V

A0A5A7TA19 Auxin-responsive family protein4.34e-5783.17Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR
        MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHH LY PCFR
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR

Query:  V
        V
Subjt:  V

A0A6J1KS93 auxin-responsive protein SAUR32-like2.23e-4374.51Show/hide
Query:  MGSGERS-QGSFK-SVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCF
        M S ERS QGS K  VPKG LAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AE+EYGF QKGTIT+PCH+ QFR+VQALIDQE SFH  H H+  PCF
Subjt:  MGSGERS-QGSFK-SVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCF

Query:  RV
        RV
Subjt:  RV

E5GCM6 Auxin-responsive family protein4.34e-5783.17Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR
        MGSGERSQ SFK VPKGCLAIKVGHE EEKQRF+VP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ QFR+VQALID+ETSFHH HHH LY PCFR
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHH-LYGPCFR

Query:  V
        V
Subjt:  V

SwissProt top hitse value%identityAlignment
O22150 Auxin-responsive protein SAUR361.9e-1248.61Show/hide
Query:  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS
        VP+G LAI VG +  +  R +VP+ YFNHPLF +LL++AE EYGF  +G IT+PC    F  V+  I   +S
Subjt:  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS

Q41220 Auxin-responsive protein SAUR156.2e-1138.27Show/hide
Query:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGF-HQKGTITLPCHIHQFRFVQALI
        +G+ +  +    S P+G +A+ VG   ++K+R++VP+ Y N PLF QLL ++E+E+G+ H  G +T+PCH   F  V + I
Subjt:  MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGF-HQKGTITLPCHIHQFRFVQALI

Q9FJF7 Auxin-responsive protein SAUR224.0e-1046.38Show/hide
Query:  RSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGF-HQKGTITLPCHIHQF
        RS  +  + PKG LA+ VG    +K+R++VPL Y N P F  LL ++EDE+GF H  G +T+PCH   F
Subjt:  RSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGF-HQKGTITLPCHIHQF

Q9SGU2 Auxin-responsive protein SAUR711.5e-0944.78Show/hide
Query:  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQF-RFVQAL
        VP+G + + VGHE E   RF+V     NHP+F+ LLKQ+  EYG+ Q+G + +PCH+  F R +++L
Subjt:  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQF-RFVQAL

Q9ZUZ3 Auxin-responsive protein SAUR322.8e-3260.33Show/hide
Query:  MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS-----
        MG+GE++  SF          K VPKGCLAIKVG + EE+QRFIVP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ +FR+VQALID E S     
Subjt:  MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS-----

Query:  -FHHQH------HHLYGPCFR
          HH+H      HHL G CFR
Subjt:  -FHHQH------HHLYGPCFR

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family2.0e-3360.33Show/hide
Query:  MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS-----
        MG+GE++  SF          K VPKGCLAIKVG + EE+QRFIVP+ YFNHPLF+QLLK+AEDEYGF QKGTIT+PCH+ +FR+VQALID E S     
Subjt:  MGSGERSQGSF----------KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS-----

Query:  -FHHQH------HHLYGPCFR
          HH+H      HHL G CFR
Subjt:  -FHHQH------HHLYGPCFR

AT3G60690.1 SAUR-like auxin-responsive protein family1.1e-1547.95Show/hide
Query:  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSF
        VPKG  A+ +G +  + QR +VP+ YFNHPLF +LL++AE+E+GF Q+G IT+PC    F+ VQ  I+  + F
Subjt:  VPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSF

AT3G61900.1 SAUR-like auxin-responsive protein family1.8e-2958.42Show/hide
Query:  MGSGER----------------SQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQET
        MGSGE+                S+   K VPKGCLAIKVG + EEKQRF+VP+FYFNHPLF+QLL++AE+EYGF QKGTIT+PCH+  FR+VQ +I++E 
Subjt:  MGSGER----------------SQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQET

Query:  S
        S
Subjt:  S

AT4G00880.1 SAUR-like auxin-responsive protein family3.3e-2857.14Show/hide
Query:  KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS---------FHHQHHHLYGPCFRV
        + VPKGCLA+KVG + EE++RF++P+ YFNHPLF QLLK+AE+E+GF QKGTIT+PCH+ +FR+VQ LID+E +          HH HH+    CFRV
Subjt:  KSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETS---------FHHQHHHLYGPCFRV

AT5G53590.1 SAUR-like auxin-responsive protein family1.4e-2156.96Show/hide
Query:  VPKGCLAIKVGHEHEEK--QRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQH
        VPKGC+AI VGHE +E+   RF+VPL + +HPLFL LLK+AE EYGF   G IT+PC + +F+ VQ +ID+ET   H H
Subjt:  VPKGCLAIKVGHEHEEK--QRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGTGGGGAGAGAAGCCAAGGGAGCTTCAAGAGCGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATGAACATGAAGAGAAGCAGCGATTTATAGTCCCTCT
CTTCTATTTCAATCACCCTTTGTTCTTGCAGCTACTCAAGCAAGCTGAAGACGAATATGGGTTTCATCAAAAGGGAACCATCACTCTTCCTTGTCATATCCACCAATTTA
GGTTTGTTCAAGCCTTGATTGATCAAGAAACCTCCTTCCATCACCAACACCACCACCTCTACGGTCCTTGCTTTAGGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTAGTGGGGAGAGAAGCCAAGGGAGCTTCAAGAGCGTCCCAAAGGGCTGTTTGGCTATCAAAGTTGGGCATGAACATGAAGAGAAGCAGCGATTTATAGTCCCTCT
CTTCTATTTCAATCACCCTTTGTTCTTGCAGCTACTCAAGCAAGCTGAAGACGAATATGGGTTTCATCAAAAGGGAACCATCACTCTTCCTTGTCATATCCACCAATTTA
GGTTTGTTCAAGCCTTGATTGATCAAGAAACCTCCTTCCATCACCAACACCACCACCTCTACGGTCCTTGCTTTAGGGTTTGA
Protein sequenceShow/hide protein sequence
MGSGERSQGSFKSVPKGCLAIKVGHEHEEKQRFIVPLFYFNHPLFLQLLKQAEDEYGFHQKGTITLPCHIHQFRFVQALIDQETSFHHQHHHLYGPCFRV