; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG13g08030 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG13g08030
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationCp4.1LG13:8243612..8245873
RNA-Seq ExpressionCp4.1LG13g08030
SyntenyCp4.1LG13g08030
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR002885 - Pentatricopeptide repeat
IPR011990 - Tetratricopeptide-like helical domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6578527.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]2.59e-9762.76Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNW+SWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKT FSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

KAG7016087.1 Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]2.59e-9762.76Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNW+SWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKT FSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

XP_022938529.1 pentatricopeptide repeat-containing protein At3g02330, mitochondrial [Cucurbita moschata]2.43e-9863.45Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

XP_022992751.1 pentatricopeptide repeat-containing protein At3g02330, mitochondrial [Cucurbita maxima]4.11e-9562.07Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLE++VLG QIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKTGF FDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

XP_023549950.1 pentatricopeptide repeat-containing protein At3g02330, mitochondrial [Cucurbita pepo subsp. pepo]2.43e-9863.45Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

TrEMBL top hitse value%identityAlignment
A0A0A0K395 Uncharacterized protein1.26e-8556.55Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDI KSIAVFLKMR++GV+ D TTLAVSLK+CS+LE+ VLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCN LEDSL VF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQA KLFLQLQK  FSFDE+SLSGALSAAAVIK  SEG+QLHGLAIKSN SSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

A0A1S3C0E6 pentatricopeptide repeat-containing protein At3g02330 isoform X32.32e-8455.86Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDI KSIA+FLKMR +GV+ D  TLAVSLKVCS+LE+ VLGIQIHGIAVQ+GFDYDVVTGSALVDMYAKCN+LEDSL VF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QG QA KLFLQLQK  FSFDEISLSGALSAAAVIK  SEG+QLHGLAIKSN SSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

A0A5D3C5W0 Pentatricopeptide repeat-containing protein6.13e-8455.86Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDI KSIA+FLKMR +GV+ D  TLAVSLKVCS+LE+ VLGIQIHGIAVQ+GFDYDVVTGSALVDMYAKCN+LEDSL VF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QG QA KLFLQLQK  FSFDEISLSGALSAAAVIK  SEG+QLHGLAIKSN SSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

A0A6J1FEC4 pentatricopeptide repeat-containing protein At3g02330, mitochondrial1.18e-9863.45Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

A0A6J1JUF1 pentatricopeptide repeat-containing protein At3g02330, mitochondrial1.99e-9562.07Show/hide
Query:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
        MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLE++VLG QIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF
Subjt:  MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVF

Query:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------
        SELPDKNWISWSAAIAGC                                                                                  
Subjt:  SELPDKNWISWSAAIAGC----------------------------------------------------------------------------------

Query:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                               QGFQALKLFLQLQKTGF FDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM G
Subjt:  -----------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

SwissProt top hitse value%identityAlignment
P0C898 Putative pentatricopeptide repeat-containing protein At3g151307.6e-2733.87Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        +VVSW++L+SG++ NGD+  S+++F +M   G+  ++ T + +LK C +L     G+QIHG  +++GF+  V  G++LVDMY+KC ++ ++  VF  + D
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSF--DEISLSGALSAAAVIKVLSEGVQLHGLAIKSNF--SSNICVANAILDM
        ++ ISW+A IAG      G +AL  F  +Q+       DE +L+  L A +   ++  G Q+HG  ++S F   S+  +  +++D+
Subjt:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSF--DEISLSGALSAAAVIKVLSEGVQLHGLAIKSNF--SSNICVANAILDM

Q9CAA8 Putative pentatricopeptide repeat-containing protein At1g689302.9e-2635.26Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        D VSW ++I G  QNG   ++I  F +M+  G+ +DQ      L  C  L     G QIH   ++  F   +  GSAL+DMY KC  L  + +VF  +  
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAGYAPDTD
        KN +SW+A + G     +  +A+K+FL +Q++G   D  +L  A+SA A +  L EG Q HG AI S     + V+N+++ + G   D D
Subjt:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAGYAPDTD

Q9FWA6 Pentatricopeptide repeat-containing protein At3g02330, mitochondrial7.8e-4037.19Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        DVVSWNS++SGYLQNG+  KSI VF+ M   G+  D  T A+ LKVCS LE+  LG+QIHGI V++G D DVV  SAL+DMYAK  +  +SL VF  +P+
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC---------------------------------------------------------------------------------------
        KN +SWSA IAGC                                                                                       
Subjt:  KNWISWSAAIAGC---------------------------------------------------------------------------------------

Query:  ------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                           GF+AL LF +L  +G  FDEISLSG   A A++K LSEG+Q++GLAIKS+ S ++CVANA +DM G
Subjt:  ------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

Q9LYV3 Putative pentatricopeptide repeat-containing protein At5g13230, mitochondrial3.5e-3237.36Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        DVV W+ +I+ + QNG  ++++ +F++MRE  V+ ++ TL+  L  C++ +   LG Q+HG+ V++GFD D+   +AL+D+YAKC K++ ++ +F+EL  
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM
        KN +SW+  I G     +G +A  +F +  +   S  E++ S AL A A +  +  GVQ+HGLAIK+N +  + V+N+++DM
Subjt:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM

Q9SUF9 Pentatricopeptide repeat-containing protein At4g082101.4e-2534.24Show/hide
Query:  HGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSEL
        +  V  WNS++SG+L N +   ++ + L++ +  +  D  TL+ +LK+C    N  LG+Q+H + V  G++ D + GS LVD++A    ++D+  +F  L
Subjt:  HGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSEL

Query:  PDKNWISWSAAIAGC--QGFQALK--LFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM
        P+K+ I++S  I GC   GF +L   LF +L K G   D+  +S  L   + +  L  G Q+HGL IK  + S    A A++DM
Subjt:  PDKNWISWSAAIAGC--QGFQALK--LFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM

Arabidopsis top hitse value%identityAlignment
AT1G16480.1 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-2738.8Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYV-LGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELP
        DVV+WN+LI GY ++ D  K++A F  MR  GV  +  T+   L  C +  + +  G  +H   V  GF+ D    ++L+ MYAKC  L  S  +F+ L 
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYV-LGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELP

Query:  DKNWISWSAAIAG----CQGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM
        ++N I+W+A +A       G + LKL  +++  G S D+ S S  LSAAA + VL EG QLHGLA+K  F  +  + NA  DM
Subjt:  DKNWISWSAAIAG----CQGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM

AT1G16480.2 Tetratricopeptide repeat (TPR)-like superfamily protein1.2e-2738.8Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYV-LGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELP
        DVV+WN+LI GY ++ D  K++A F  MR  GV  +  T+   L  C +  + +  G  +H   V  GF+ D    ++L+ MYAKC  L  S  +F+ L 
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYV-LGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELP

Query:  DKNWISWSAAIAG----CQGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM
        ++N I+W+A +A       G + LKL  +++  G S D+ S S  LSAAA + VL EG QLHGLA+K  F  +  + NA  DM
Subjt:  DKNWISWSAAIAG----CQGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM

AT3G02330.1 Pentatricopeptide repeat (PPR) superfamily protein5.6e-4137.19Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        DVVSWNS++SGYLQNG+  KSI VF+ M   G+  D  T A+ LKVCS LE+  LG+QIHGI V++G D DVV  SAL+DMYAK  +  +SL VF  +P+
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC---------------------------------------------------------------------------------------
        KN +SWSA IAGC                                                                                       
Subjt:  KNWISWSAAIAGC---------------------------------------------------------------------------------------

Query:  ------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG
                           GF+AL LF +L  +G  FDEISLSG   A A++K LSEG+Q++GLAIKS+ S ++CVANA +DM G
Subjt:  ------------------QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAG

AT3G15130.1 Tetratricopeptide repeat (TPR)-like superfamily protein5.4e-2833.87Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        +VVSW++L+SG++ NGD+  S+++F +M   G+  ++ T + +LK C +L     G+QIHG  +++GF+  V  G++LVDMY+KC ++ ++  VF  + D
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSF--DEISLSGALSAAAVIKVLSEGVQLHGLAIKSNF--SSNICVANAILDM
        ++ ISW+A IAG      G +AL  F  +Q+       DE +L+  L A +   ++  G Q+HG  ++S F   S+  +  +++D+
Subjt:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSF--DEISLSGALSAAAVIKVLSEGVQLHGLAIKSNF--SSNICVANAILDM

AT5G13230.1 Tetratricopeptide repeat (TPR)-like superfamily protein2.5e-3337.36Show/hide
Query:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
        DVV W+ +I+ + QNG  ++++ +F++MRE  V+ ++ TL+  L  C++ +   LG Q+HG+ V++GFD D+   +AL+D+YAKC K++ ++ +F+EL  
Subjt:  DVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD

Query:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM
        KN +SW+  I G     +G +A  +F +  +   S  E++ S AL A A +  +  GVQ+HGLAIK+N +  + V+N+++DM
Subjt:  KNWISWSAAIAGC----QGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCATCATGGTGATGTGGTTTCATGGAATTCTTTGATTTCTGGGTACTTGCAAAATGGTGACATACATAAGTCAATTGCTGTCTTTTTGAAAATGAGAGAA
ATGGGAGTTTTGTTAGACCAAACTACCCTGGCGGTTTCTTTAAAAGTTTGCTCCATGTTGGAAAATTACGTTCTGGGAATTCAGATTCATGGTATTGCAGTCCAA
ATGGGTTTTGATTATGATGTTGTGACAGGAAGTGCTCTAGTAGATATGTATGCCAAGTGTAACAAACTAGAGGATTCACTTAGTGTTTTCTCTGAATTGCCAGAT
AAGAATTGGATTTCATGGAGTGCTGCAATTGCAGGCTGTCAAGGGTTTCAAGCTTTAAAGCTATTTCTTCAGTTGCAGAAAACCGGTTTCAGTTTCGATGAAATA
TCTCTTTCTGGTGCATTGAGTGCAGCTGCAGTGATCAAAGTGCTCTCTGAGGGGGTTCAGCTACATGGATTAGCCATTAAGTCTAATTTTTCATCAAATATCTGT
GTTGCAAATGCCATCCTGGATATGGCTGGGTATGCGCCTGATACAGACACCATACAGGTTGAAGGGATTGAAGAAAATGGGCATCGGGAGGTCAAATCCTATGGC
TTTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCTCATCATGGTGATGTGGTTTCATGGAATTCTTTGATTTCTGGGTACTTGCAAAATGGTGACATACATAAGTCAATTGCTGTCTTTTTGAAAATGAGAGAA
ATGGGAGTTTTGTTAGACCAAACTACCCTGGCGGTTTCTTTAAAAGTTTGCTCCATGTTGGAAAATTACGTTCTGGGAATTCAGATTCATGGTATTGCAGTCCAA
ATGGGTTTTGATTATGATGTTGTGACAGGAAGTGCTCTAGTAGATATGTATGCCAAGTGTAACAAACTAGAGGATTCACTTAGTGTTTTCTCTGAATTGCCAGAT
AAGAATTGGATTTCATGGAGTGCTGCAATTGCAGGCTGTCAAGGGTTTCAAGCTTTAAAGCTATTTCTTCAGTTGCAGAAAACCGGTTTCAGTTTCGATGAAATA
TCTCTTTCTGGTGCATTGAGTGCAGCTGCAGTGATCAAAGTGCTCTCTGAGGGGGTTCAGCTACATGGATTAGCCATTAAGTCTAATTTTTCATCAAATATCTGT
GTTGCAAATGCCATCCTGGATATGGCTGGGTATGCGCCTGATACAGACACCATACAGGTTGAAGGGATTGAAGAAAATGGGCATCGGGAGGTCAAATCCTATGGC
TTTTCTTAG
Protein sequenceShow/hide protein sequence
MPHHGDVVSWNSLISGYLQNGDIHKSIAVFLKMREMGVLLDQTTLAVSLKVCSMLENYVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNKLEDSLSVFSELPD
KNWISWSAAIAGCQGFQALKLFLQLQKTGFSFDEISLSGALSAAAVIKVLSEGVQLHGLAIKSNFSSNICVANAILDMAGYAPDTDTIQVEGIEENGHREVKSYG
FS