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Cp4.1LG14g04490 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG14g04490
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionRadical SAM superfamily protein isoform 1
Genome locationCp4.1LG14:1550052..1550330
RNA-Seq ExpressionCp4.1LG14g04490
SyntenyCp4.1LG14g04490
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044340.1 putative beta-D-xylosidase 5 isoform X2 [Cucumis melo var. makuwa]6.73e-4171.68Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQ-RSGHELMHSRSVSKGAFGSS-------------YAGQV
        MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL  ANDESSHRRTRSD+QPP FE+LDQ R   EL HSRSV+K AFGSS             YAGQV
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQ-RSGHELMHSRSVSKGAFGSS-------------YAGQV

Query:  SNN-----GNPPR
        SN      GNPPR
Subjt:  SNN-----GNPPR

KAG6576920.1 hypothetical protein SDJN03_24494, partial [Cucurbita argyrosperma subsp. sororia]2.06e-5897.83Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGNPPR
        MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL NDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGN PR
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGNPPR

KAG7014945.1 NADH-ubiquinone oxidoreductase chain 4L, partial [Cucurbita argyrosperma subsp. argyrosperma]1.56e-5598.86Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNG
        MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL NDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNG
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNG

KGN52765.1 hypothetical protein Csa_015267 [Cucumis sativus]2.28e-4171.43Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSS-------------YAGQVS
        MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL  ANDESSHRRTRSD+QPP FE+LDQRS  EL HSRSV+K AFGSS             Y GQVS
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSS-------------YAGQVS

Query:  NN-----GNPPR
        N      GNP R
Subjt:  NN-----GNPPR

XP_038905929.1 uncharacterized protein LOC120091851 [Benincasa hispida]1.14e-4374.31Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL-ANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSS-------------YAGQVSN
        MEGLIPYLFHAMKKQKPRH+YRSQSVGSSRSYHLL  NDESSHRRTRSDFQPP  E+ DQRS HELMHSRSVSKGAFGSS             Y GQV+N
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL-ANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSS-------------YAGQVSN

Query:  N----GNPP
             GNPP
Subjt:  N----GNPP

TrEMBL top hitse value%identityAlignment
A0A0A0KT06 Uncharacterized protein1.10e-4171.43Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSS-------------YAGQVS
        MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL  ANDESSHRRTRSD+QPP FE+LDQRS  EL HSRSV+K AFGSS             Y GQVS
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSS-------------YAGQVS

Query:  NN-----GNPPR
        N      GNP R
Subjt:  NN-----GNPPR

A0A5A7TM95 Putative beta-D-xylosidase 5 isoform X23.26e-4171.68Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQ-RSGHELMHSRSVSKGAFGSS-------------YAGQV
        MEGLIPYLFHAMKKQKPRH YRSQSVGSSRSYHLL  ANDESSHRRTRSD+QPP FE+LDQ R   EL HSRSV+K AFGSS             YAGQV
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL--ANDESSHRRTRSDFQPPRFEYLDQ-RSGHELMHSRSVSKGAFGSS-------------YAGQV

Query:  SNN-----GNPPR
        SN      GNPPR
Subjt:  SNN-----GNPPR

A0A5C7I5L1 Uncharacterized protein2.14e-2465.82Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL----ANDESSHRRTRSDFQPPRF--EYLDQRSGHELMHSRSVSK
        MEGLIP+L HAMKKQ+P+H YRS SVGS+RSYHLL    A D SSHRRTRSDFQPP    ++L QRSG E + SR+V++
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLL----ANDESSHRRTRSDFQPPRF--EYLDQRSGHELMHSRSVSK

A0A5N6QPG1 Uncharacterized protein2.48e-2566.67Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDES----SHRRTRSDFQPPRFEYLDQRSGHE-LMHSRSVSK
        MEGLIPYL HA+KKQKP+H YRS S GS+RSYHLL N +S    SHRRTRSDFQPP  E+++QRSG E L+ S S +K
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDES----SHRRTRSDFQPPRFEYLDQRSGHE-LMHSRSVSK

A0A6P6AFC0 uncharacterized protein LOC1113090198.11e-2458.54Show/hide
Query:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLAN-------DESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGA
        MEGLIPYL  AM+KQKP H YRS S+GSSRSYHLL         + SSHRRTRSDFQPP  E+ +QRSG + + ++S + G+
Subjt:  MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLAN-------DESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G19615.1 unknown protein4.9e-1051.72Show/hide
Query:  MEGLIPYLFHAMKK-QKPRHD-YRSQSVGSSRSYHLLANDE--------SSHRRTRSDFQP-PRFEYLDQRS---GHELMHSRSVSK
        MEGLIPYL HA+KK  KP H  YRS SVGSSRSY  L   +        SSHRRTRSD+ P    +  DQRS   G E ++  S S+
Subjt:  MEGLIPYLFHAMKK-QKPRHD-YRSQSVGSSRSYHLLANDE--------SSHRRTRSDFQP-PRFEYLDQRS---GHELMHSRSVSK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGGCTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCATGACTATAGAAGCCAATCAGTAGGTTCGAGCCGAAGCTACCATCTCTTGGCAAA
CGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCAAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGG
GTGCGTTTGGATCATCGTATGCTGGCCAGGTTTCAAATAATGGTAACCCTCCTCGCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGGGCTTAATTCCTTATCTATTCCATGCAATGAAGAAGCAAAAGCCACGCCATGACTATAGAAGCCAATCAGTAGGTTCGAGCCGAAGCTACCATCTCTTGGCAAA
CGACGAGTCGTCTCACCGACGAACACGATCGGATTTTCAGCCACCAAGGTTCGAGTACTTGGACCAACGGTCGGGGCACGAGTTAATGCATTCCCGTAGCGTTAGTAAGG
GTGCGTTTGGATCATCGTATGCTGGCCAGGTTTCAAATAATGGTAACCCTCCTCGCTAG
Protein sequenceShow/hide protein sequence
MEGLIPYLFHAMKKQKPRHDYRSQSVGSSRSYHLLANDESSHRRTRSDFQPPRFEYLDQRSGHELMHSRSVSKGAFGSSYAGQVSNNGNPPR