; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG15g04790 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG15g04790
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionCold regulated protein 27, putative isoform 2
Genome locationCp4.1LG15:5839491..5842958
RNA-Seq ExpressionCp4.1LG15g04790
SyntenyCp4.1LG15g04790
Gene Ontology termsGO:0009409 - response to cold (biological process)
GO:0042752 - regulation of circadian rhythm (biological process)
InterPro domainsIPR044678 - Cold-regulated protein 27/28


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022952080.1 uncharacterized protein LOC111454842 isoform X1 [Cucurbita moschata]7.98e-16494.33Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV
        CRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RV
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV

XP_022952081.1 uncharacterized protein LOC111454842 isoform X2 [Cucurbita moschata]3.45e-17194.55Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER
        CRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RVAPYKRLSSER
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER

XP_022972373.1 uncharacterized protein LOC111470946 isoform X2 [Cucurbita maxima]1.64e-16994.16Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR HIRNKTNSCQSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER
        CRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSDS GNDRVAPYKRLSSER
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER

XP_023553838.1 uncharacterized protein LOC111811294 isoform X1 [Cucurbita pepo subsp. pepo]5.11e-176100Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV
        CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV

XP_023553839.1 uncharacterized protein LOC111811294 isoform X2 [Cucurbita pepo subsp. pepo]2.20e-183100Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER
        CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER

TrEMBL top hitse value%identityAlignment
A0A6J1GJA3 uncharacterized protein LOC111454842 isoform X21.67e-17194.55Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER
        CRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RVAPYKRLSSER
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER

A0A6J1GJF7 uncharacterized protein LOC111454842 isoform X39.98e-12578.95Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSE                             + + +   H  S    CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV
        CRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RV
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV

A0A6J1GKR5 uncharacterized protein LOC111454842 isoform X13.86e-16494.33Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWT+EKHRLFLDSLEASFVQDLHRYRHLRA SSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKAN+GRTDPLL KTADSPAILEDVWINHFPSAG  CTLETTDVLEECGSCSDR HIRNKTNS QSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV
        CRDSHTI TEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGN+RV
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV

A0A6J1I4M4 uncharacterized protein LOC111470946 isoform X11.83e-16293.93Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR HIRNKTNSCQSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV
        CRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSDS GNDRV
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRV

A0A6J1I9R8 uncharacterized protein LOC111470946 isoform X27.95e-17094.16Show/hide
Query:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ
        MVDAHTPSSMSPPVADRES MSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLD+LEASFVQDLHRYRHLRAFSSKQ
Subjt:  MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQ

Query:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC
        K+RRK IMPNISSSES+VLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAG   T ETTDVLEECGSCSDR HIRNKTNSCQSARSSQQIP C
Subjt:  KVRRKLIMPNISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSC

Query:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER
        CRDSHTI  EVSDQNFVDTHPGELS GTPITKRLKKASSDS GNDRVAPYKRLSSER
Subjt:  CRDSHTIFTEVSDQNFVDTHPGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER

SwissProt top hitse value%identityAlignment
Q8L8T7 Cold-regulated protein 271.2e-1029.91Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  Y  L A    + V       +    S  +  VL D  WQK
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK

Query:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIF---TEVSDQNFVDT
         N+ + +  ++     +S   L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  RD   I     EVSDQNFV  
Subjt:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIF---TEVSDQNFVDT

Query:  HPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL
        + G   +     K      S+SS  D+V P  +L
Subjt:  HPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL

Arabidopsis top hitse value%identityAlignment
AT4G33980.1 BEST Arabidopsis thaliana protein match is: cold regulated gene 27 (TAIR:AT5G42900.2)7.8e-0529.69Show/hide
Query:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNI--SS
        DR+   + + S      S S  S  T + S  D          +LD   T WT+EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNI--SS

Query:  SESLVLQDASWQKANIGRTDPLLHKTAD
         +  VLQ+  WQK N G+    L  +++
Subjt:  SESLVLQDASWQKANIGRTDPLLHKTAD

AT4G33980.2 FUNCTIONS IN: molecular_function unknown7.8e-0529.69Show/hide
Query:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNI--SS
        DR+   + + S      S S  S  T + S  D          +LD   T WT+EKH  +LD LE+SFV+ L+    L    +++  R + +  N   S+
Subjt:  DRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPNI--SS

Query:  SESLVLQDASWQKANIGRTDPLLHKTAD
         +  VLQ+  WQK N G+    L  +++
Subjt:  SESLVLQDASWQKANIGRTDPLLHKTAD

AT5G42900.1 cold regulated gene 278.6e-1229.91Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  Y  L A    + V       +    S  +  VL D  WQK
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK

Query:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIF---TEVSDQNFVDT
         N+ + +  ++     +S   L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  RD   I     EVSDQNFV  
Subjt:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIF---TEVSDQNFVDT

Query:  HPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL
        + G   +     K      S+SS  D+V P  +L
Subjt:  HPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL

AT5G42900.2 cold regulated gene 278.6e-1229.91Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  Y  L A    + V       +    S  +  VL D  WQK
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK

Query:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIF---TEVSDQNFVDT
         N+ + +  ++     +S   L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  RD   I     EVSDQNFV  
Subjt:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIF---TEVSDQNFVDT

Query:  HPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL
        + G   +     K      S+SS  D+V P  +L
Subjt:  HPGELSDGTPITKRLKKASSDSSGNDRVAPYKRL

AT5G42900.3 cold regulated gene 276.6e-1230.04Show/hide
Query:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK
        R + +S  SS+   + EG+     S +    + ++T WT+EKH L+L S+EASFV  L  Y  L A    + V       +    S  +  VL D  WQK
Subjt:  RLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN---ISSSESLVLQDASWQK

Query:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIFT--EVSDQNFVDTH
         N+ + +  ++     +S   L   WI H+    K     T +   +  S S+      K   C   SA S +Q+ S  RD   I    EVSDQNFV  +
Subjt:  ANIGRTDPLLH--KTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQ--SARSSQQIPSCCRDSHTIFT--EVSDQNFVDTH

Query:  PGELSDGTPITKRLKKASSDSSGNDRVAPYKRL
         G   +     K      S+SS  D+V P  +L
Subjt:  PGELSDGTPITKRLKKASSDSSGNDRVAPYKRL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTAGACGCTCATACGCCGTCGTCCATGTCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTC
TTCTTCCAATACCGTTGATGCGTCCGAGGGGGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGAT
TATTTCTTGATTCTTTAGAAGCATCTTTTGTCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTTTCCTCGAAACAGAAAGTGCGTCGGAAGCTGATCATGCCTAAT
ATATCTTCTTCAGAGTCGCTGGTCCTTCAGGATGCCTCCTGGCAGAAGGCTAACATTGGGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGA
GGATGTATGGATAAATCATTTCCCTTCTGCAGGAAAACCGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGGCACATAAGAAACA
AGACAAACTCCTGTCAATCTGCCAGAAGTTCTCAGCAGATTCCTTCATGCTGTCGTGATTCTCATACAATCTTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCAT
CCAGGAGAGTTGTCTGATGGCACGCCTATTACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACGACCGGGTTGCACCATATAAAAGATTATCATCAGAAAG
ATGA
mRNA sequenceShow/hide mRNA sequence
CACAGACCACCACCATTCACCGAATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTCATATCTGCACGAGCCTGAATCCCGAGAGGGTTTCGGACCTAAATTTTCGCCCA
CGATTTCCATTTTTTCTTTGATTTGATTTTCGATATTTGGCTGTTCCGAACGATTTCGCTTTGTCTTTGATCCTTCCGAAATGGTAGACGCTCATACGCCGTCGTCCATG
TCGCCGCCGGTTGCAGATCGAGAATCACCCATGTCGGTCTCTGCTAGCGACTTGACTCGTTTGAACTCCGAATCCTACTCTTCTTCCAATACCGTTGATGCGTCCGAGGG
GGATTTGCCTTTGATGCCTTCTCATCATTGTTTTCAACTGGATGCGGTGCAAACACATTGGACAGATGAGAAACACAGATTATTTCTTGATTCTTTAGAAGCATCTTTTG
TCCAAGATTTGCATCGATATAGGCATCTTCGTGCTTTTTCCTCGAAACAGAAAGTGCGTCGGAAGCTGATCATGCCTAATATATCTTCTTCAGAGTCGCTGGTCCTTCAG
GATGCCTCCTGGCAGAAGGCTAACATTGGGAGAACTGATCCTTTATTGCATAAGACTGCCGATTCTCCCGCTATTTTAGAGGATGTATGGATAAATCATTTCCCTTCTGC
AGGAAAACCGTGTACTCTGGAAACTACTGATGTTCTTGAAGAATGTGGAAGTTGTAGTGATAGGAGGCACATAAGAAACAAGACAAACTCCTGTCAATCTGCCAGAAGTT
CTCAGCAGATTCCTTCATGCTGTCGTGATTCTCATACAATCTTTACAGAAGTTTCAGATCAAAACTTTGTGGATACTCATCCAGGAGAGTTGTCTGATGGCACGCCTATT
ACAAAACGATTAAAGAAAGCTTCCTCTGATTCTTCAGGCAACGACCGGGTTGCACCATATAAAAGATTATCATCAGAAAGATGAAAGCCAGATGCAAAAACTTTGTGCCT
CCAAATTCAGATTTGTGTTACTGTGTAAGAGGGAGCTGACAACAACTCATTCCAACATGTGAAAACACCTGGCTGTTCAAGCTCGTTAACCGAACGCGACACGATTCTGT
TTTCCTTTTGAAAGAGCATCGAAAAGTAAATAAGGGAAGTGACAACAATAATTCTACCAGAAGATCTACGGCTGGAAGGAGAAAATACGTTTGTTTATGGTACAAACTAA
ACTTTTTCTTAGTTCATCAAATATAGAGTGAAAATATATGTTAACCCTTTCATTTCTCCTGCTTTTTTTCTTCTTAGAGTTTGAAGAAATGGAAATTCCAATAGATTTAG
GGTATGAATATACATGATATAGAGAAAGCTAGACACCGACCCTGATACTGATATAGATATACACACCCTTTTTCATCTGTTTTGAAATACTCTCATTTTGAAGTTCAGGT
AGAGACCTCAAATGTAAATTACTATTACATAAAACAATAGATTTGAACAGACTTATTGATTCTCTTTAGGTGGAGCCTTTCTCTTGCTTATGGAGTATGTTGATGGCTAA
GTGCTCGCTTGAGTAGTTGCTTTGTTCGAATGGTTATCAAACGGGACTTAAGCTATTATATCTTTGCTTGCTTCGTTACGATCTTATATAAGCTATAATATGCAGATTCA
ATCTTTTTTTTTTCTTTCAAAAAACCATTGTTGGTTTTTTCTTGGAAAATTTGTGATGATTGTTGCTATTTTGTCCCTAATATTCTAACA
Protein sequenceShow/hide protein sequence
MVDAHTPSSMSPPVADRESPMSVSASDLTRLNSESYSSSNTVDASEGDLPLMPSHHCFQLDAVQTHWTDEKHRLFLDSLEASFVQDLHRYRHLRAFSSKQKVRRKLIMPN
ISSSESLVLQDASWQKANIGRTDPLLHKTADSPAILEDVWINHFPSAGKPCTLETTDVLEECGSCSDRRHIRNKTNSCQSARSSQQIPSCCRDSHTIFTEVSDQNFVDTH
PGELSDGTPITKRLKKASSDSSGNDRVAPYKRLSSER