; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG17g09900 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG17g09900
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
Description40S ribosomal protein S15a-5-like
Genome locationCp4.1LG17:7526315..7529263
RNA-Seq ExpressionCp4.1LG17g09900
SyntenyCp4.1LG17g09900
Gene Ontology termsGO:0006412 - translation (biological process)
GO:0022627 - cytosolic small ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domainsIPR000630 - Ribosomal protein S8
IPR035987 - Ribosomal protein S8 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6592876.1 40S ribosomal protein S15a-5, partial [Cucurbita argyrosperma subsp. sororia]2.77e-8799.22Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALT+RQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

KAG7025281.1 40S ribosomal protein S15a-5 [Cucurbita argyrosperma subsp. argyrosperma]1.13e-8698.45Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKAL++RQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

XP_022959550.1 40S ribosomal protein S15a-2-like [Cucurbita moschata]7.94e-8798.45Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALT+RQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

XP_023005097.1 40S ribosomal protein S15a-5-like [Cucurbita maxima]3.93e-8797.67Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPIS+VMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKE+EAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGI+DHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

XP_023514843.1 40S ribosomal protein S15a-2-like [Cucurbita pepo subsp. pepo]3.36e-88100Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

TrEMBL top hitse value%identityAlignment
A0A1S3BDC0 40S ribosomal protein S15a-2-like8.06e-8089.15Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGK+ VELKPIS+VM+SFLKVMKDHGYI D+QVH+PQRVGRITV+LQGRIKDCKALT+RQDIKAK+IEAYR+RTLPT QWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEA+KRNVGGQVLG+FH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

A0A5D3D2U5 40S ribosomal protein S15a-2-like8.06e-8089.15Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGK+ VELKPIS+VM+SFLKVMKDHGYI D+QVH+PQRVGRITV+LQGRIKDCKALT+RQDIKAK+IEAYR+RTLPT QWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEA+KRNVGGQVLG+FH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

A0A6J1D967 40S ribosomal protein S15a-5-like isoform X21.98e-8089.15Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR+IVNAERRGK+ VELKPIS+VMSSFLKVMKDHGYI D+QV+DP RVGRITVELQGRIKDCKA+THRQDIKAK+IEAYR+RTLPT QWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEA++RNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

A0A6J1H6L4 40S ribosomal protein S15a-2-like3.84e-8798.45Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPISSVMS+FLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALT+RQDIKAKEIEAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGILDHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

A0A6J1KS88 40S ribosomal protein S15a-5-like1.90e-8797.67Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALRAIVNAERRGKATVELKPIS+VMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKE+EAYRIRTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTPEGI+DHEEAIKRNVGGQVLGYFH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

SwissProt top hitse value%identityAlignment
O82205 40S ribosomal protein S15a-23.0e-5881.4Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAE+RGKA+VELKP+S+VMSSFLK+MK+ GYI +FQVHDP RVGRITV+LQGR+ DCKALT+RQD+KA EI  Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        +VITTP+GILDHEEAIKRNVGGQVLG+FH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

P42798 40S ribosomal protein S15a-11.5e-3352Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQVLGYFH
        T  GI+DHEEA ++NVGG+VLG+F+
Subjt:  TPEGILDHEEAIKRNVGGQVLGYFH

Q00332 40S ribosomal protein S15a1.5e-3352Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQVLGYFH
        T  GI+DHEEA ++NVGG+VLG+F+
Subjt:  TPEGILDHEEAIKRNVGGQVLGYFH

Q9AT34 40S ribosomal protein S15a1.1e-3352Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQVLGYFH
        T  GI+DHEEA ++NVGG+VLG+F+
Subjt:  TPEGILDHEEAIKRNVGGQVLGYFH

Q9M0E0 40S ribosomal protein S15a-53.9e-5882.17Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAERRGKA+VELKPIS+VMSSFL++MK+ GYI +FQV+DP RVGRITV+LQGR+ DCKALT+RQD++AKEIE Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTP+GILDHEEAIKRNVGGQVLG+F+
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

Arabidopsis top hitse value%identityAlignment
AT1G07770.1 ribosomal protein S15A1.1e-3452Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQVLGYFH
        T  GI+DHEEA ++NVGG+VLG+F+
Subjt:  TPEGILDHEEAIKRNVGGQVLGYFH

AT1G07770.2 ribosomal protein S15A1.1e-3452Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQVLGYFH
        T  GI+DHEEA ++NVGG+VLG+F+
Subjt:  TPEGILDHEEAIKRNVGGQVLGYFH

AT2G19720.1 ribosomal protein S15A B2.1e-5981.4Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAE+RGKA+VELKP+S+VMSSFLK+MK+ GYI +FQVHDP RVGRITV+LQGR+ DCKALT+RQD+KA EI  Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        +VITTP+GILDHEEAIKRNVGGQVLG+FH
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

AT4G29430.1 ribosomal protein S15A E2.8e-5982.17Show/hide
Query:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY
        MGRRILNDALR IVNAERRGKA+VELKPIS+VMSSFL++MK+ GYI +FQV+DP RVGRITV+LQGR+ DCKALT+RQD++AKEIE Y  RTLPTRQWGY
Subjt:  MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGY

Query:  VVITTPEGILDHEEAIKRNVGGQVLGYFH
        VVITTP+GILDHEEAIKRNVGGQVLG+F+
Subjt:  VVITTPEGILDHEEAIKRNVGGQVLGYFH

AT5G59850.1 Ribosomal protein S8 family protein1.1e-3452Show/hide
Query:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT
        +LNDAL+++ NAE+RGK  V ++P S V+  FL VM+ HGYI +F+  D  R G+I VEL GR+  C  ++ R D+  KEIE +  R LP+RQ+GY+V+T
Subjt:  ILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVIT

Query:  TPEGILDHEEAIKRNVGGQVLGYFH
        T  GI+DHEEA ++NVGG+VLG+F+
Subjt:  TPEGILDHEEAIKRNVGGQVLGYFH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTAGGAGGATATTGAACGATGCATTAAGAGCGATTGTCAATGCTGAGAGGAGGGGAAAAGCTACGGTGGAACTGAAACCCATTTCTTCTGTTATGTCTTCCTTCCT
TAAAGTCATGAAAGATCATGGATATATCAATGACTTTCAAGTTCATGATCCACAACGAGTTGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCTC
TCACCCACAGGCAGGACATCAAGGCAAAGGAAATTGAAGCTTACAGAATACGAACGCTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTG
GATCATGAAGAGGCAATAAAAAGGAATGTTGGTGGTCAGGTTCTTGGATATTTTCATTAG
mRNA sequenceShow/hide mRNA sequence
TGAAAATTGCCCCCACATCTGGAAATTGCCTCCATTTCTTTCCACCGCAGTTCGGAGTCGTATCTCGAGTTAGGGCTGAGCCAACCGCGCCGTCGTTTCCTCTTCTGCCT
CACCGCCTCCATTTCTTCCACCGCAGTTCGGAGTTGTATCTCGAGTTAGGGCTGAGCCAAACGCGCCGTCGTTTTCTATTCTGCCTCACCGGTTCAAATAGGTCGCAGGA
AAACGCCATGATAGAGGAAATTTGGTCTCAGGATTTGTGACTTTTCGTGTACTCTAAGATATGGGTAGGAGGATATTGAACGATGCATTAAGAGCGATTGTCAATGCTGA
GAGGAGGGGAAAAGCTACGGTGGAACTGAAACCCATTTCTTCTGTTATGTCTTCCTTCCTTAAAGTCATGAAAGATCATGGATATATCAATGACTTTCAAGTTCATGATC
CACAACGAGTTGGAAGGATAACAGTTGAGCTGCAAGGTAGGATCAAGGATTGCAAGGCTCTCACCCACAGGCAGGACATCAAGGCAAAGGAAATTGAAGCTTACAGAATA
CGAACGCTTCCAACACGTCAGTGGGGTTATGTTGTGATTACTACTCCAGAAGGCATCTTGGATCATGAAGAGGCAATAAAAAGGAATGTTGGTGGTCAGGTTCTTGGATA
TTTTCATTAGAGAAACCCCCATTTTTTGCAGCTTCCTTGATTGAAAGATCCTTGTGATTTTTCTCAGATGTTTCTCATTTTGCATTGGGATCTTAGGACTTTGAGCACTG
TTGTCCACTTTTTCAGTATTATTGCTCTTACCAATAATGTAAGCTTGATTTTATGTGCTTTTTTGTTAACTACTATTTCTTCCCTTACTAAAATTTAATTAGTTTGAAGT
TTAAAGTTTAATTTAAACATATACATGCATACATGCATAATATTCCATCCATTTTCCATTTTGTTTCTTTCTAAAAACTCCTCCAAAGCCCTCCTTCTACCTTATTTCAA
TACT
Protein sequenceShow/hide protein sequence
MGRRILNDALRAIVNAERRGKATVELKPISSVMSSFLKVMKDHGYINDFQVHDPQRVGRITVELQGRIKDCKALTHRQDIKAKEIEAYRIRTLPTRQWGYVVITTPEGIL
DHEEAIKRNVGGQVLGYFH