; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Cp4.1LG18g03210 (gene) of Cucurbita pepo (MU-CU-16) v4.1 genome

Gene IDCp4.1LG18g03210
OrganismCucurbita pepo var. pepo MU-CU-16 (Cucurbita pepo (MU-CU-16) v4.1)
DescriptionRING-type E3 ubiquitin transferase
Genome locationCp4.1LG18:4796274..4796828
RNA-Seq ExpressionCp4.1LG18g03210
SyntenyCp4.1LG18g03210
Gene Ontology termsGO:0016567 - protein ubiquitination (biological process)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR044675 - E3 ubiquitin-protein ligase RING1-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6590024.1 RING-H2 finger protein ATL1, partial [Cucurbita argyrosperma subsp. sororia]3.48e-12196.2Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDSASNYFAQPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAA AA 
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
         EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

XP_022960602.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita moschata]4.61e-12196.2Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDSASNYFAQPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA  
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
         EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

XP_022987479.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita maxima]6.32e-12195.11Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDSASN+F+QPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAA    
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
        VEEEGNGNECVVCLSAFEEGEEVKKLPRC+HMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

XP_023516728.1 E3 ubiquitin-protein ligase EL5-like [Cucurbita pepo subsp. pepo]3.49e-128100Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
        VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

XP_038879803.1 RING-H2 finger protein ATL39-like [Benincasa hispida]2.27e-9379.35Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDS+S  FAQPT HPAKSSLPMLYYGLVV+GTAAIVLVLYNFIVI WCSDNR  RASPALAG+YAEM+NSSRS  SS    LCSFKFKKGS  AAAAA 
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
         EEEG GNEC VCLSAFE+G+EVKKLPRC HMFHA CIDMWLFSH DCPLCRAPV   GLS+ Q +AEQ+ NSGHGL ESG LV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

TrEMBL top hitse value%identityAlignment
A0A6J1D0Z7 RING-type E3 ubiquitin transferase2.37e-8776.37Show/hide
Query:  SASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEE
        S+S  F QPT HPAKSSLPMLYYGLVV+GTAAIVLV+YNFIVI WCSD RRGR SP +A +YAEM++SS S QSS+RNLL SF+FKKG+ AAAA A  EE
Subjt:  SASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEE

Query:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAV-PGLSKRQTVAEQQGNSGHGLPESGGLV
        EGNG EC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPVA+ PGL +  T AEQ  NSGHGL ESGGLV
Subjt:  EGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAV-PGLSKRQTVAEQQGNSGHGLPESGGLV

A0A6J1EGS5 RING-type E3 ubiquitin transferase9.25e-8678.92Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGS-AAAAAAA
        M DSAS + AQPT+HPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSD+  G+AS ALAG+YAEMVNSSRS QSSNRNLL SFKFKKGS A AAA A
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGS-AAAAAAA

Query:  VVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQT
         +EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAPV  P L +R T
Subjt:  VVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQT

A0A6J1H7W2 RING-type E3 ubiquitin transferase2.23e-12196.2Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDSASNYFAQPT+HPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAA  
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
         EEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHA CIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

A0A6J1HZG2 RING-type E3 ubiquitin transferase5.89e-9377.01Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        M DSAS + AQPT+HPAKSSLPMLYYGLVVIGTA IVLVLYN I+I WCSDN  G+ASPALAG+YAEMVNSSRS QSSNRNLL SFKFKKGS A A A  
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTV---AEQQGNSGHGLPESGGLV
        +EEEG GNEC VCLSAFE+GEEVKKLPRC HMFHA CIDMWL+SH DCPLCRAP   P L +R T    AEQQ NSGHGL ES  LV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTV---AEQQGNSGHGLPESGGLV

A0A6J1JJ05 RING-type E3 ubiquitin transferase3.06e-12195.11Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV
        MSDSASN+F+QPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAG+YAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAA    
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAV

Query:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV
        VEEEGNGNECVVCLSAFEEGEEVKKLPRC+HMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQT AEQQGNSGHGLPESGGLV
Subjt:  VEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV

SwissProt top hitse value%identityAlignment
P93823 RING-H2 finger protein ATL11.9e-1332.24Show/hide
Query:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEEE
        P    + ++ P+L   ++ I   A +LV Y   VI  C +        RR R+S             +R L  S    +  FKFKK    A      ++ 
Subjt:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEEE

Query:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA
         N  EC VCL+ F+E E+++ +P C H+FH  CID+WL  + +CPLCR  V+
Subjt:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA

Q9LF64 RING-H2 finger protein ATL524.0e-1631.89Show/hide
Query:  NYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGNYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA
        ++F    +  + SS   L   L+ I T+A++LV Y  ++  +C  + +  +S  L       G ++     S +    N +++ S   +K+K G      
Subjt:  NYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGNYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA

Query:  AAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTVAEQQGNSGH
                +G++C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRA       P A  G +    VA  Q NS H
Subjt:  AAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTVAEQQGNSGH

Q9LRB7 E3 ubiquitin-protein ligase EL58.1e-1734.68Show/hide
Query:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIV---LVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSN------------RNLLCS
        M +S+S+    P + PA     M   G+  +    IV   L L   ++  +C + RR   + + +G         RS    +            R+L  +
Subjt:  MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIV---LVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSN------------RNLLCS

Query:  FKFKKGSAAAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVP
          + + +AAAAA    EE+ +G EC VCL+  E+GEE + LPRC H FHA C+DMWL SH  CPLCR  V VP
Subjt:  FKFKKGSAAAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVP

Q9LSW9 RING-H2 finger protein ATL164.2e-1333.73Show/hide
Query:  PTNHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKK----
        P  H A S   S P+L   ++ I   A +LV Y   VI  C              S  RR    P +   Y+  +  SR L  S    +  FKFKK    
Subjt:  PTNHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKK----

Query:  GSAAAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA
                   EEE    EC VCLS F++ E+++ +P C H+FH  CID+WL ++ +CPLCR  V+
Subjt:  GSAAAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA

Q9LX93 E3 ubiquitin-protein ligase RING12.7e-1230.86Show/hide
Query:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRS------------------LQSSNRNLLCSFKFKKGSA
        P   P +    +L   + V+G+  + L L  F + +  +  RR  A+    G+  +  +   +                  L  S  N +    FKKG  
Subjt:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRS------------------LQSSNRNLLCSFKFKKGSA

Query:  AAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPV
                    +G EC VCL+ FEE E ++ LP+C H FH  CID WL SH +CPLCRAPV
Subjt:  AAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPV

Arabidopsis top hitse value%identityAlignment
AT1G04360.1 RING/U-box superfamily protein1.3e-1432.24Show/hide
Query:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEEE
        P    + ++ P+L   ++ I   A +LV Y   VI  C +        RR R+S             +R L  S    +  FKFKK    A      ++ 
Subjt:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSD-------NRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEEE

Query:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA
         N  EC VCL+ F+E E+++ +P C H+FH  CID+WL  + +CPLCR  V+
Subjt:  GNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA

AT4G33565.1 RING/U-box superfamily protein6.6e-1461.22Show/hide
Query:  GNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPV
        G +C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRAP+
Subjt:  GNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPV

AT5G10380.1 RING/U-box superfamily protein1.9e-1330.86Show/hide
Query:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRS------------------LQSSNRNLLCSFKFKKGSA
        P   P +    +L   + V+G+  + L L  F + +  +  RR  A+    G+  +  +   +                  L  S  N +    FKKG  
Subjt:  PTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRS------------------LQSSNRNLLCSFKFKKGSA

Query:  AAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPV
                    +G EC VCL+ FEE E ++ LP+C H FH  CID WL SH +CPLCRAPV
Subjt:  AAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPV

AT5G17600.1 RING/U-box superfamily protein2.9e-1731.89Show/hide
Query:  NYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGNYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA
        ++F    +  + SS   L   L+ I T+A++LV Y  ++  +C  + +  +S  L       G ++     S +    N +++ S   +K+K G      
Subjt:  NYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPAL------AGNYAEMVNSSRSLQSSNRNLLCS---FKFKKGSAAAAA

Query:  AAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTVAEQQGNSGH
                +G++C VCLS FEE E ++ LP+C H FH  CID WL SH +CPLCRA       P A  G +    VA  Q NS H
Subjt:  AAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRA-------PVAVPGLSKRQTVAEQQGNSGH

AT5G43420.1 RING/U-box superfamily protein3.0e-1433.73Show/hide
Query:  PTNHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKK----
        P  H A S   S P+L   ++ I   A +LV Y   VI  C              S  RR    P +   Y+  +  SR L  S    +  FKFKK    
Subjt:  PTNHPAKS---SLPMLYYGLVVIGTAAIVLVLYNFIVIMWC--------------SDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKK----

Query:  GSAAAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA
                   EEE    EC VCLS F++ E+++ +P C H+FH  CID+WL ++ +CPLCR  V+
Subjt:  GSAAAAAAAVVEEEGNGNECVVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTGATTCTGCTTCCAATTATTTTGCTCAACCAACGAATCATCCAGCAAAATCAAGCCTACCCATGTTGTATTACGGCCTTGTGGTCATCGGAACGGCGGCGATTGT
GTTAGTTCTTTACAATTTCATCGTTATCATGTGGTGTTCCGACAACCGTCGTGGCCGAGCTTCGCCGGCGCTGGCTGGAAATTATGCGGAGATGGTGAATTCAAGCCGTA
GCTTGCAGAGCTCGAATAGGAATTTGTTGTGCAGCTTTAAGTTCAAGAAGGGGTCTGCAGCGGCGGCGGCGGCGGCGGTGGTGGAAGAAGAAGGGAATGGGAATGAATGT
GTGGTTTGTTTGTCGGCGTTTGAGGAGGGGGAAGAGGTTAAGAAACTGCCGAGATGTATGCATATGTTTCATGCTCGTTGTATAGATATGTGGCTTTTTTCTCACTGTGA
TTGTCCCCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGTTGAGCAAACGCCAAACCGTGGCGGAGCAACAGGGGAATTCAGGGCATGGGTTGCCGGAATCCGGTGGCTTGG
TTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAGTGATTCTGCTTCCAATTATTTTGCTCAACCAACGAATCATCCAGCAAAATCAAGCCTACCCATGTTGTATTACGGCCTTGTGGTCATCGGAACGGCGGCGATTGT
GTTAGTTCTTTACAATTTCATCGTTATCATGTGGTGTTCCGACAACCGTCGTGGCCGAGCTTCGCCGGCGCTGGCTGGAAATTATGCGGAGATGGTGAATTCAAGCCGTA
GCTTGCAGAGCTCGAATAGGAATTTGTTGTGCAGCTTTAAGTTCAAGAAGGGGTCTGCAGCGGCGGCGGCGGCGGCGGTGGTGGAAGAAGAAGGGAATGGGAATGAATGT
GTGGTTTGTTTGTCGGCGTTTGAGGAGGGGGAAGAGGTTAAGAAACTGCCGAGATGTATGCATATGTTTCATGCTCGTTGTATAGATATGTGGCTTTTTTCTCACTGTGA
TTGTCCCCTCTGCCGTGCTCCGGTGGCGGTGCCGGGGTTGAGCAAACGCCAAACCGTGGCGGAGCAACAGGGGAATTCAGGGCATGGGTTGCCGGAATCCGGTGGCTTGG
TTTGA
Protein sequenceShow/hide protein sequence
MSDSASNYFAQPTNHPAKSSLPMLYYGLVVIGTAAIVLVLYNFIVIMWCSDNRRGRASPALAGNYAEMVNSSRSLQSSNRNLLCSFKFKKGSAAAAAAAVVEEEGNGNEC
VVCLSAFEEGEEVKKLPRCMHMFHARCIDMWLFSHCDCPLCRAPVAVPGLSKRQTVAEQQGNSGHGLPESGGLV