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CsGy0G001490 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G001490
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPhotosystem II reaction center protein Z
Genome locationGy14Chr0:19270023..19272764
RNA-Seq ExpressionCsGy0G001490
SyntenyCsGy0G001490
Gene Ontology termsGO:0042549 - photosystem II stabilization (biological process)
GO:0009535 - chloroplast thylakoid membrane (cellular component)
GO:0009539 - photosystem II reaction center (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR002644 - Photosystem II PsbZ, reaction centre
IPR036512 - Photosystem II PsbZ superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8648140.1 hypothetical protein Csa_021516 [Cucumis sativus]1.41e-5359.69Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLILYFLFLRWKVKMNSIVEPYALHKGCLVMIHQPASSFSKGKTGEF--
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSG                                       I++    F  GK G    
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLILYFLFLRWKVKMNSIVEPYALHKGCLVMIHQPASSFSKGKTGEF--

Query:  -VLESTELLNLRETITKSQSKINRL---MYKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILF-PGFHTKAQSN
         +  +TE          S+ KI  L   + KEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILF PGFHTKAQSN
Subjt:  -VLESTELLNLRETITKSQSKINRL---MYKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILF-PGFHTKAQSN

YP_009004041.1 photosystem II protein Z [Cucumis hystrix]1.11e-2398.15Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

YP_009430624.1 photosystem II protein z [Gynostemma cardiospermum]1.57e-2396.3Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVP+VFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

YP_009751987.1 photosystem II subunit Z [Cionosicys macranthus]1.57e-2396.3Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKN+VFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

YP_010144251.1 photosystem II reaction center Z protein [Poikilospermum lanceolatum]7.82e-24100Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

TrEMBL top hitse value%identityAlignment
A0A1P8LE03 Photosystem II reaction center protein Z5.36e-2498.15Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

A0A1X9Q1D6 Photosystem II reaction center protein Z5.36e-2498.15Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

A0A218KG33 Photosystem II reaction center protein Z5.36e-2498.15Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

A0A410HF78 Photosystem II reaction center protein Z5.36e-2498.15Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

A0A7T7JMT8 Photosystem II reaction center Z protein3.79e-24100Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

SwissProt top hitse value%identityAlignment
P56790 Photosystem II reaction center protein Z1.0e-1994.44Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALI+TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

Q09MI1 Photosystem II reaction center protein Z2.3e-1994.44Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALI TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

Q32902 Photosystem II reaction center protein Z7.9e-2096.3Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

Q4VZN6 Photosystem II reaction center protein Z1.6e-2098.15Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

Q5QA82 Photosystem II reaction center protein Z3.0e-1992.59Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLA+FALI TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

Arabidopsis top hitse value%identityAlignment
ATCG00300.1 YCF97.3e-2194.44Show/hide
Query:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI
        MTIAFQLAVFALI+TSSILLISVPVVFASPDGWS NKNVVFSGTSLWIGLVFL+
Subjt:  MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLI

ATCG00670.1 plastid-encoded CLP P1.6e-0773.53Show/hide
Query:  VMIHQPASSFSKGKTGEFVLESTELLNLRETITK
        VMIHQPASSF + +TGEF+LE+ ELL LRETIT+
Subjt:  VMIHQPASSFSKGKTGEFVLESTELLNLRETITK

ATCG00800.1 structural constituent of ribosome9.3e-0881.25Show/hide
Query:  KEFNSGNRKLNIAITRIGNPYGHPNILAEFIS
        KE N  NRKLNIAITRI NPYG PNILAEFI+
Subjt:  KEFNSGNRKLNIAITRIGNPYGHPNILAEFIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGATGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCGTTATGGATTGGATTAGTCTTTCTGATCCTCTATTTTCTATTCCTTCGCTGGAAGGTAAAAATGAATTCCATTGTGGAGCCGTATG
CACTGCACAAAGGATGCCTGGTAATGATCCATCAACCTGCTAGTTCTTTTTCTAAGGGAAAAACGGGAGAATTTGTCCTGGAATCGACCGAACTACTGAACCTGCGCGAA
ACCATCACAAAGAGCCAATCGAAGATTAACAGATTAATGTACAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACA
CCCTAATATTCTCGCAGAATTTATATCCAAATACATGTCTTATTTTTCAATAATCCATATTTGCAGCAATGAAATACTCTTCCCCGGTTTCCATACCAAGGCTCAATCTA
ATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTATTGCTTTCCAATTGGCTGTTTTTGCATTAATTGTTACTTCATCAATCTTACTGATTAGTGTGCCCGTTGTATTTGCTTCTCCTGATGGTTGGTCGGGTAACAA
AAATGTTGTATTTTCCGGTACATCGTTATGGATTGGATTAGTCTTTCTGATCCTCTATTTTCTATTCCTTCGCTGGAAGGTAAAAATGAATTCCATTGTGGAGCCGTATG
CACTGCACAAAGGATGCCTGGTAATGATCCATCAACCTGCTAGTTCTTTTTCTAAGGGAAAAACGGGAGAATTTGTCCTGGAATCGACCGAACTACTGAACCTGCGCGAA
ACCATCACAAAGAGCCAATCGAAGATTAACAGATTAATGTACAAAGAATTCAATTCTGGGAACCGAAAACTCAACATTGCTATTACAAGAATAGGAAACCCTTATGGACA
CCCTAATATTCTCGCAGAATTTATATCCAAATACATGTCTTATTTTTCAATAATCCATATTTGCAGCAATGAAATACTCTTCCCCGGTTTCCATACCAAGGCTCAATCTA
ATTAA
Protein sequenceShow/hide protein sequence
MTIAFQLAVFALIVTSSILLISVPVVFASPDGWSGNKNVVFSGTSLWIGLVFLILYFLFLRWKVKMNSIVEPYALHKGCLVMIHQPASSFSKGKTGEFVLESTELLNLRE
TITKSQSKINRLMYKEFNSGNRKLNIAITRIGNPYGHPNILAEFISKYMSYFSIIHICSNEILFPGFHTKAQSN