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CsGy0G002110 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G002110
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionDNA topoisomerase 2-binding protein 1 isoform X2
Genome locationGy14Chr0:4435590..4436807
RNA-Seq ExpressionCsGy0G002110
SyntenyCsGy0G002110
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_031739836.1 sphingoid long-chain bases kinase 2, mitochondrial-like isoform X2 [Cucumis sativus]1.37e-56100Show/hide
Query:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
Subjt:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

XP_031745562.1 uncharacterized protein LOC116405987 isoform X1 [Cucumis sativus]3.44e-70100Show/hide
Query:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQVCAMQSRRGNA
        MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQVCAMQSRRGNA
Subjt:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQVCAMQSRRGNA

Query:  TIPNS
        TIPNS
Subjt:  TIPNS

XP_031745759.1 sphingoid long-chain bases kinase 2, mitochondrial-like isoform X2 [Cucumis sativus]1.03e-56100Show/hide
Query:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
Subjt:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

XP_031745760.1 sphingoid long-chain bases kinase 2, mitochondrial-like isoform X3 [Cucumis sativus]8.84e-57100Show/hide
Query:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
Subjt:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

XP_031745761.1 sphingoid long-chain bases kinase 2, mitochondrial-like isoform X4 [Cucumis sativus]5.00e-57100Show/hide
Query:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
Subjt:  MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

TrEMBL top hitse value%identityAlignment
A0A1S3BAL1 DNA topoisomerase 2-binding protein 1 isoform X32.11e-2586.89Show/hide
Query:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        IF PDCSLVGQDHSETS IG +SNQWSKRAERKEDV NST EDGTVGI DGFSETQTESQ+
Subjt:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

A0A1S4DV57 DNA topoisomerase 2-binding protein 1 isoform X12.11e-2586.89Show/hide
Query:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        IF PDCSLVGQDHSETS IG +SNQWSKRAERKEDV NST EDGTVGI DGFSETQTESQ+
Subjt:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

A0A1S4DV59 DNA topoisomerase 2-binding protein 1 isoform X28.31e-2688.52Show/hide
Query:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV
        IF PDCSLVGQDHSETS IG +SNQWSKRAERKEDV NST EDGTVGI DGFSETQTESQV
Subjt:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQV

A0A5A7U8G5 DNA topoisomerase 2-binding protein 1 isoform X22.88e-2588.33Show/hide
Query:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQ
        IF PDCSLVGQDHSETS IG +SNQWSKRAERKEDV NST EDGTVGI DGFSETQTESQ
Subjt:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQ

A0A5D3BRP8 DNA topoisomerase 2-binding protein 1 isoform X22.88e-2588.33Show/hide
Query:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQ
        IF PDCSLVGQDHSETS IG +SNQWSKRAERKEDV NST EDGTVGI DGFSETQTESQ
Subjt:  IFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCGCTTCCGCAATTGAGGACTTGTTGGAGCAGACAACTAAGATTCAAGATCAGAAGTCACCTGGAAAGACTGGCTGCGATAAAAATTTTCCTACCAGACTGT
TCGCTTGTTGGTCAAGACCATTCAGAAACTTCTCCAATTGGTGCTTTATCTAACCAGTGGTCAAAAAGAGCTGAAAGAAAAGAAGATGTGGGCAATTCTACTACT
GAAGATGGGACTGTGGGCATATGTGATGGCTTTAGTGAAACACAAACAGAGTCTCAGGTGTGTGCTATGCAATCCAGAAGGGGGAATGCAACTATACCCAATTCA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGTCGCTTCCGCAATTGAGGACTTGTTGGAGCAGACAACTAAGATTCAAGATCAGAAGTCACCTGGAAAGACTGGCTGCGATAAAAATTTTCCTACCAGACTGT
TCGCTTGTTGGTCAAGACCATTCAGAAACTTCTCCAATTGGTGCTTTATCTAACCAGTGGTCAAAAAGAGCTGAAAGAAAAGAAGATGTGGGCAATTCTACTACT
GAAGATGGGACTGTGGGCATATGTGATGGCTTTAGTGAAACACAAACAGAGTCTCAGGTGTGTGCTATGCAATCCAGAAGGGGGAATGCAACTATACCCAATTCA
TAA
Protein sequenceShow/hide protein sequence
MSLPQLRTCWSRQLRFKIRSHLERLAAIKIFLPDCSLVGQDHSETSPIGALSNQWSKRAERKEDVGNSTTEDGTVGICDGFSETQTESQVCAMQSRRGNATIPNS