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CsGy0G002200 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G002200
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionBUD13 homolog
Genome locationGy14Chr0:5431647..5441624
RNA-Seq ExpressionCsGy0G002200
SyntenyCsGy0G002200
Gene Ontology termsGO:0000398 - mRNA splicing, via spliceosome (biological process)
GO:0005684 - U2-type spliceosomal complex (cellular component)
GO:0070274 - RES complex (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8645975.1 hypothetical protein Csa_023811, partial [Cucumis sativus]1.07e-1864.1Show/hide
Query:  QWLLEVILVHNFLLKRFLLQELKFLSMLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        QWL EVILV NFLLKRFLLQE                        IKLEWGMGLAKNREV+A+LMELELEKDRPFARS
Subjt:  QWLLEVILVHNFLLKRFLLQELKFLSMLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
KAE8650964.1 hypothetical protein Csa_001464, partial [Cucumis sativus]9.97e-2696.15Show/hide
Query:  MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKA++MELELEKDRPFARS
Subjt:  MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
KAE8652983.1 hypothetical protein Csa_023955, partial [Cucumis sativus]1.57e-1560.76Show/hide
Query:  QWLLEVILVHNFLLKRFLLQELKFLSMLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSS
        QWL EVILVHNFL  RFLLQ                           LEWGMGLAKNREV+AELMELELEKDRPFARSS
Subjt:  QWLLEVILVHNFLLKRFLLQELKFLSMLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSS
KAG7011019.1 BUD13-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma]1.73e-1477.78Show/hide
Query:  MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSSS
        MLLSN+ VAACD  L SQEIKLEWG GLA+ RE +AE MELELEKDRPFARSS+
Subjt:  MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSSS
XP_031743783.1 uncharacterized protein LOC101221496 isoform X1 [Cucumis sativus]3.89e-1475Show/hide
Query:  MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        MLLSNLTVAACDAGL     K+  G GLAK R  +AELMELELEKDRPFARS
Subjt:  MLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
TrEMBL top hitse value%identityAlignment
A0A0A0LTH5 Uncharacterized protein4.15e-0978.38Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        +++EIKLEWG GLA+ RE +AELMELELEKDRPFARS
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
A0A1S3CHR8 BUD13 homolog7.76e-0978.38Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        + +EIKLEWG GLA+ RE +AELMELELEKDRPFARS
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
A0A5A7VKV1 BUD13-like protein7.76e-0978.38Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        + +EIKLEWG GLA+ RE +AELMELELEKDRPFARS
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
A0A6J1DPM1 BUD13 homolog7.77e-0978.38Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        + +EIKLEWG GLA+ RE +AELMELELEKDRPFARS
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
A0A6J1FYT1 LOW QUALITY PROTEIN: BUD13 homolog1.06e-0874.36Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSSS
        + +EIKLEWG GLA+ RE +AE MELELEKDRPFARSS+
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSSS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G31870.1 unknown protein1.5e-0867.57Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        + +EIKLEWG GLA+ RE +A L ELELEKD+PFAR+
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
AT1G31870.2 unknown protein1.5e-0867.57Show/hide
Query:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS
        + +EIKLEWG GLA+ RE +A L ELELEKD+PFAR+
Subjt:  RSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARS

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAATGGTTGCTAGAGGTGATCTTGGTGCATAACTTTTTATTGAAGAGGTTCCTCCTGCAGGAGTTAAAGTTCTTATCAATGCTTTTATCAAATCTCACTGTGGC
TGCTTGTGATGCTGGTCTCCGGTCACAGGAGATAAAGTTGGAATGGGGCATGGGCTTAGCTAAAAACCGAGAAGTAAAAGCTGAACTTATGGAGTTAGAACTCGAGAAAG
ATAGACCATTTGCACGGTCAAGTTCTTTGTCCAGAGGATAG
mRNA sequenceShow/hide mRNA sequence
GTCTTCATCTTCTTCTCTCCGACAATTTACGTCATACAAATGAGGCTGTAATGCTGATATTAATGTGATTGTAAATATAGAAAGTGTATACTCCATACCAAATTTGCATT
CAATTATTACAGCTTCTGATGGGGCAATGGTTGCTAGAGGTGATCTTGGTGCATAACTTTTTATTGAAGAGGTTCCTCCTGCAGGAGTTAAAGTTCTTATCAATGCTTTT
ATCAAATCTCACTGTGGCTGCTTGTGATGCTGGTCTCCGGTCACAGGAGATAAAGTTGGAATGGGGCATGGGCTTAGCTAAAAACCGAGAAGTAAAAGCTGAACTTATGG
AGTTAGAACTCGAGAAAGATAGACCATTTGCACGGTCAAGTTCTTTGTCCAGAGGATAGTAGTTGAGCATTAGTGGTGATCTCGGTTTGAATTGATAAGGAGGTATCAAA
GTTTTTTGAAAGCTTCAAAGGTAATATTTTCTAAAGCCCTAATTTGATTAGTTTAGGGTTACTTGTTAATTGTGCCATTTAGGGTAGAAATTTGATTCTTTTTCCGCTGT
GCATGTCTTAGTTCTATCATGTGGTATCAGAGCATGCTTCAATTTTACCCAATTGCATGTGATGGGTTCATATTTATTAGATAAATTTTGGTTGGAACTAAAATGAATAT
ATTATGATTTTGGCCCTATATTAAGTGTTTTTGTTCTAATTATTGTAATTAGTCTTGTTAATGGCTTATTTTTATTGTTGAAAAG
Protein sequenceShow/hide protein sequence
MGQWLLEVILVHNFLLKRFLLQELKFLSMLLSNLTVAACDAGLRSQEIKLEWGMGLAKNREVKAELMELELEKDRPFARSSSLSRG