; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

CsGy0G002390 (gene) of Cucumber (Gy14) v2.1 genome

Gene IDCsGy0G002390
OrganismCucumis sativus L. var. sativus cv. Gy14 (Cucumber (Gy14) v2.1)
DescriptionPMD domain-containing protein
Genome locationGy14Chr0:6390997..6391773
RNA-Seq ExpressionCsGy0G002390
SyntenyCsGy0G002390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025724.1 uncharacterized protein E6C27_scaffold653G00030 [Cucumis melo var. makuwa]4.58e-11775.31Show/hide
Query:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL
        NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+P+M KIF AIATS S+NL  L+EL
Subjt:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL

Query:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK
        V+GYFQGVENHNQ+ SS LLQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLS+KEAKLEAKLK+VR ES KLSG+I KN++ELKQKQ EISK
Subjt:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK

Query:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        TCEEIDKL+CA I+GD DAKMLS LRESLE+TLEELKN KWTP
Subjt:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

TYK06155.1 uncharacterized protein E5676_scaffold287G00030 [Cucumis melo var. makuwa]7.06e-11775.31Show/hide
Query:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL
        NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKIIRTPFER+SSL+P+M KIF AIATS S+NL  L+EL
Subjt:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL

Query:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK
        V+GYFQGVENHNQ+ SS LLQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLS+KEAKLEAKLK+VR ES KLSG+I KN++ELKQKQ EISK
Subjt:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK

Query:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        TCEEIDKL+CA I+GD DAKML  LRESLE+TLEELKN KWTP
Subjt:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

TYK22840.1 uncharacterized protein E5676_scaffold115G00220 [Cucumis melo var. makuwa]2.88e-9169.72Show/hide
Query:  VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNL
        VLS + NSK PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT FER+S+LE +MHKIFDAI TS S++L
Subjt:  VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNL

Query:  IVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQK
          LRELV GYFQGVENHNQ+HSS LLQSTKD QL + KGFV+ LR+DEN IL +T+  +R L +LS+KEAKLE KLK+V  ES KL GII +N+++LKQK
Subjt:  IVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQK

Query:  QHEISKTCEEIDKLECAP
        Q+EISKTCEEIDKLECAP
Subjt:  QHEISKTCEEIDKLECAP

XP_031739998.1 uncharacterized protein LOC116403342 [Cucumis sativus]1.21e-14296.02Show/hide
Query:  MPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDA
        +PNLEDCN+VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEP+MHKIFDA
Subjt:  MPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDA

Query:  IATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIIC
        IAT GSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKR LTRLS+KEAKLEAKLKMVRAESAK SGII 
Subjt:  IATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIIC

Query:  KNDLELKQKQHEISKTCEEIDKLECA
        KNDLELK KQHEISKTCEEIDKLECA
Subjt:  KNDLELKQKQHEISKTCEEIDKLECA

XP_031745312.1 uncharacterized protein LOC116405439 [Cucumis sativus]6.43e-16698.84Show/hide
Query:  MPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDA
        MPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEP+MHKIFDA
Subjt:  MPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDA

Query:  IATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIIC
        IATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLS+KEAKLEAKLKMVRAESAKLSGII 
Subjt:  IATSGSDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIIC

Query:  KNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        KNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
Subjt:  KNDLELKQKQHEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

TrEMBL top hitse value%identityAlignment
A0A5A7SJ85 Uncharacterized protein2.22e-11775.31Show/hide
Query:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL
        NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKII TPFER+SSL+P+M KIF AIATS S+NL  L+EL
Subjt:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL

Query:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK
        V+GYFQGVENHNQ+ SS LLQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLS+KEAKLEAKLK+VR ES KLSG+I KN++ELKQKQ EISK
Subjt:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK

Query:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        TCEEIDKL+CA I+GD DAKMLS LRESLE+TLEELKN KWTP
Subjt:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

A0A5A7SJR1 Uncharacterized protein1.12e-9069.27Show/hide
Query:  VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNL
        VLS + N K PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT FER+S+LE +MHKIFDAI TS S++L
Subjt:  VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNL

Query:  IVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQK
          LRELV GYFQGVENHNQ+HSS LLQSTKD QL + KGFV+ LR+DEN IL +T+  +R L +LS+KEAKLE KLK+V  ES KL GII +N+++LKQK
Subjt:  IVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQK

Query:  QHEISKTCEEIDKLECAP
        Q+EISKTCEEIDKLECAP
Subjt:  QHEISKTCEEIDKLECAP

A0A5A7U4C3 Uncharacterized protein1.00e-8775.63Show/hide
Query:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLI
        LS + NSK PIGA I+S CP V K  PQ+V GTEPIT SEISHFCAD+LISDLR++ AITLWE+LRQKIIRTPFER+SSLEP+M KIF AIATSGS+NL 
Subjt:  LSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLI

Query:  VLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELK
         L+E+V+GYFQGVENHNQ+ SS LLQSTKD QL EAKGFVKTLRVD+NRIL ET+  +RRL RLS+KEAKLEAKLK VR ES KLSGII KN++ELK
Subjt:  VLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELK

A0A5D3C453 Uncharacterized protein3.42e-11775.31Show/hide
Query:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL
        NSK PIGA  +S CP V K  PQ+V GT+PIT  EISHFC D+LISDLRR+ AITL E+LRQKIIRTPFER+SSL+P+M KIF AIATS S+NL  L+EL
Subjt:  NSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNLIVLREL

Query:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK
        V+GYFQGVENHNQ+ SS LLQSTKD QL E KGFVKTLR+DENRIL ET+T +RRL RLS+KEAKLEAKLK+VR ES KLSG+I KN++ELKQKQ EISK
Subjt:  VNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQHEISK

Query:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP
        TCEEIDKL+CA I+GD DAKML  LRESLE+TLEELKN KWTP
Subjt:  TCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP

A0A5D3DHK0 Uncharacterized protein1.40e-9169.72Show/hide
Query:  VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNL
        VLS + NSK PIGA  +S  P VIK  PQ+VEG +PIT SEISHFCAD+LISDL+R+  ITLWE+LRQKIIRT FER+S+LE +MHKIFDAI TS S++L
Subjt:  VLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSGSDNL

Query:  IVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQK
          LRELV GYFQGVENHNQ+HSS LLQSTKD QL + KGFV+ LR+DEN IL +T+  +R L +LS+KEAKLE KLK+V  ES KL GII +N+++LKQK
Subjt:  IVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQK

Query:  QHEISKTCEEIDKLECAP
        Q+EISKTCEEIDKLECAP
Subjt:  QHEISKTCEEIDKLECAP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGAATCTAGAAGACTGTAACGTTGTACTTTCTTATAATGGGAACTCTAAGGAACCTATAGGCGCAAATATTGTGTCTGCTTGTCCTCCTGTGATCAAGGGA
CCTCCTCAAAAAGTGGAAGGCACGGAGCCTATTACAGTTTCTGAGATTTCTCATTTTTGTGCTGACAGCTTAATTTCTGACCTCCGACGACAGGCTGCCATAACC
TTATGGGAAAACCTACGACAGAAGATCATTCGTACCCCTTTTGAACGACTGAGTAGTCTTGAACCAAAAATGCATAAGATCTTTGATGCGATTGCGACTAGCGGC
AGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTCTACTCCAATCAACTAAGGAT
GTTCAGCTGACGGAGGCAAAAGGTTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTGGCAGAGACCAACACTGCTAAACGTCGTCTTACACGATTGTCC
TCCAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGGGCTGAGTCTGCTAAACTTTCTGGAATAATTTGTAAGAACGACCTGGAGCTGAAGCAGAAGCAA
CATGAGATTTCGAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTTGGAGATATTGATGCTAAAATGCTATCAACACTTCGTGAATCTTTAGAA
AGCACACTAGAGGAGCTGAAGAACTTTAAATGGACTCCATGA
mRNA sequenceShow/hide mRNA sequence
ATGCCGAATCTAGAAGACTGTAACGTTGTACTTTCTTATAATGGGAACTCTAAGGAACCTATAGGCGCAAATATTGTGTCTGCTTGTCCTCCTGTGATCAAGGGA
CCTCCTCAAAAAGTGGAAGGCACGGAGCCTATTACAGTTTCTGAGATTTCTCATTTTTGTGCTGACAGCTTAATTTCTGACCTCCGACGACAGGCTGCCATAACC
TTATGGGAAAACCTACGACAGAAGATCATTCGTACCCCTTTTGAACGACTGAGTAGTCTTGAACCAAAAATGCATAAGATCTTTGATGCGATTGCGACTAGCGGC
AGCGACAACCTTATTGTTTTGAGGGAGCTTGTGAATGGTTACTTCCAAGGTGTCGAGAACCATAATCAAATACATTCCTCATTTCTACTCCAATCAACTAAGGAT
GTTCAGCTGACGGAGGCAAAAGGTTTTGTGAAGACTCTGCGAGTTGATGAGAATCGTATATTGGCAGAGACCAACACTGCTAAACGTCGTCTTACACGATTGTCC
TCCAAGGAGGCTAAACTAGAGGCAAAACTAAAGATGGTGCGGGCTGAGTCTGCTAAACTTTCTGGAATAATTTGTAAGAACGACCTGGAGCTGAAGCAGAAGCAA
CATGAGATTTCGAAGACTTGTGAGGAAATTGACAAACTCGAATGTGCCCCGATCGTTGGAGATATTGATGCTAAAATGCTATCAACACTTCGTGAATCTTTAGAA
AGCACACTAGAGGAGCTGAAGAACTTTAAATGGACTCCATGA
Protein sequenceShow/hide protein sequence
MPNLEDCNVVLSYNGNSKEPIGANIVSACPPVIKGPPQKVEGTEPITVSEISHFCADSLISDLRRQAAITLWENLRQKIIRTPFERLSSLEPKMHKIFDAIATSG
SDNLIVLRELVNGYFQGVENHNQIHSSFLLQSTKDVQLTEAKGFVKTLRVDENRILAETNTAKRRLTRLSSKEAKLEAKLKMVRAESAKLSGIICKNDLELKQKQ
HEISKTCEEIDKLECAPIVGDIDAKMLSTLRESLESTLEELKNFKWTP